Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb080990 Zea mays HOM05D006114 ORTHO05D007609 1.0e-40 169.5 77 100.0
Zm00001eb434300 Zea mays HOM05D006114 ORTHO05D007609 9.0e-37 156.4 75 94.7
Zm00001eb076050 Zea mays HOM05D006114 ORTHO05D007609 1.9e-34 148.7 75 90.7
Zm00001eb268540 Zea mays HOM05D006114 ORTHO05D007609 3.2e-34 147.9 75 90.7
Os04g0686700 Oryza sativa ssp. japonica HOM05D006114 ORTHO05D007609 1.2e-33 146.0 77 87.0
Zm00001eb346130 Zea mays HOM05D003599 ORTHO05D004221 2.1e-33 145.2 75 89.3
Zm00001eb243390 Zea mays HOM05D006114 ORTHO05D007609 6.2e-30 133.7 75 82.7
TAR381G1603 Trochodendron aralioides HOM05D006114 ORTHO05D007609 3.4e-20 101.3 76 57.9
Sed0024386 Sechium edule HOM05D006114 ORTHO05D007609 4.5e-20 100.9 69 63.8
Eucgr.F02716 Eucalyptus grandis HOM05D006114 ORTHO05D007609 5.9e-20 100.5 74 59.5
QL02p024207 Quercus lobata HOM05D006114 ORTHO05D007609 5.9e-20 100.5 76 56.6
Sed0010814 Sechium edule HOM05D006114 ORTHO05D007609 5.9e-20 100.5 73 61.6
HPP92_009302 Vanilla planifolia HOM05D006114 ORTHO05D007609 5.9e-20 100.5 75 56.0
Aqoxy5G02132 Aquilegia oxysepala HOM05D006114 ORTHO05D007609 7.6e-20 100.1 67 67.2
CANSAT25G1256 Cannabis sativa HOM05D006114 ORTHO05D007609 7.6e-20 100.1 69 63.8
BcaB05g25019 Brassica carinata HOM05D006114 ORTHO05D007609 1.0e-19 99.8 77 58.4
THA.LOC104813707 Tarenaya hassleriana HOM05D006114 ORTHO05D007609 1.0e-19 99.8 77 58.4
Potri.002G069900 Populus trichocarpa HOM05D006114 ORTHO05D007609 1.3e-19 99.4 70 61.4
RcHm_v2.0_Chr6g0276341 Rosa chinensis HOM05D006114 ORTHO05D007609 1.3e-19 99.4 76 56.6
AT1G76920 Arabidopsis thaliana HOM05D006114 ORTHO05D007609 1.7e-19 99.0 77 57.1
Carub.0002s2378 Capsella rubella HOM05D006114 ORTHO05D007609 1.7e-19 99.0 77 57.1
CARHR070420 Cardamine hirsuta HOM05D006114 ORTHO05D007609 1.7e-19 99.0 77 57.1
Lj2g0010896 Lotus japonicus HOM05D006114 ORTHO05D007609 1.7e-19 99.0 76 56.6
Sabra02G0054600 Salix brachista HOM05D006114 ORTHO05D007609 1.7e-19 99.0 70 61.4
Thhalv10019824m.g Eutrema salsugineum HOM05D006114 ORTHO05D007609 2.2e-19 98.6 77 57.1
SpUn0346_0010 Schrenkiella parvula HOM05D006114 ORTHO05D007609 2.2e-19 98.6 77 57.1
AL2G37050 Arabidopsis lyrata HOM05D006114 ORTHO05D007609 2.9e-19 98.2 70 61.4
Cpa.g.sc21.182 Carica papaya HOM05D006114 ORTHO05D007609 2.9e-19 98.2 77 57.1
Cfa018335 Carpinus fangiana HOM05D006114 ORTHO05D007609 2.9e-19 98.2 76 56.6
Haze_17740 Corylus avellana HOM05D006114 ORTHO05D007609 2.9e-19 98.2 76 56.6
Dinv41097 Davidia involucrata HOM05D006114 ORTHO05D007609 2.9e-19 98.2 76 56.6
THA.LOC104812044 Tarenaya hassleriana HOM05D006114 ORTHO05D007609 2.9e-19 98.2 77 57.1
TAR625G1556 Trochodendron aralioides HOM05D006114 ORTHO05D007609 2.9e-19 98.2 76 57.9
Actinidia15143 Actinidia chinensis HOM05D006114 ORTHO05D007609 3.8e-19 97.8 69 62.3
Aa31LG4G6950 Aethionema arabicum HOM05D006114 ORTHO05D007609 3.8e-19 97.8 75 57.3
Nn1g06119 Nelumbo nucifera HOM05D006114 ORTHO05D007609 3.8e-19 97.8 68 63.2
Lalb_Chr19g0130321 Lupinus albus HOM05D006114 ORTHO05D007609 5.0e-19 97.4 79 55.7
Medtr6g034935 Medicago truncatula HOM05D006114 ORTHO05D007609 5.0e-19 97.4 68 60.3
BcaC08g45501 Brassica carinata HOM05D006114 ORTHO05D007609 6.5e-19 97.1 77 55.8
C06p31720 Brassica napus HOM05D006114 ORTHO05D007609 6.5e-19 97.1 77 55.8
BolC6t38302H Brassica oleracea HOM05D006114 ORTHO05D007609 6.5e-19 97.1 77 55.8
BraA07t30466Z Brassica rapa HOM05D006114 ORTHO05D007609 6.5e-19 97.1 77 55.8
Ciclev10001576m.g Citrus clementina HOM05D006114 ORTHO05D007609 6.5e-19 97.1 77 57.1
Ca_27292_v3 Cicer arietinum L. HOM05D006114 ORTHO05D007609 8.5e-19 96.7 68 61.8
Rhsim05G0182400 Rhododendron simsii HOM05D006114 ORTHO05D007609 8.5e-19 96.7 69 60.9
Hund26709 Selenicereus undatus HOM05D006114 ORTHO05D000105 8.5e-19 96.7 79 54.4
EL10Ac7g15790 Beta vulgaris HOM05D006114 ORTHO05D007609 1.1e-18 96.3 77 55.8
Lj7A371T45 Lonicera japonica HOM05D006114 ORTHO05D007609 1.1e-18 96.3 76 57.9
PSO675G2834 Papaver somniferum HOM05D006114 ORTHO05D007609 1.1e-18 96.3 68 61.8
BcaB02g07084 Brassica carinata HOM05D006114 ORTHO05D007609 1.4e-18 95.9 78 53.8
A07p28250 Brassica napus HOM05D006114 ORTHO05D007609 1.4e-18 95.9 77 54.5
PGR042G1057 Punica granatum HOM05D006114 ORTHO05D007609 1.4e-18 95.9 77 54.5
PGR122G0006 Punica granatum HOM05D006114 ORTHO05D007609 1.4e-18 95.9 77 54.5
AUR62009796 Chenopodium quinoa HOM05D006114 ORTHO05D007609 1.9e-18 95.5 77 55.8
AUR62039242 Chenopodium quinoa HOM05D006114 ORTHO05D007609 1.9e-18 95.5 77 55.8
Gohir.A05G269900 Gossypium hirsutum HOM05D006114 ORTHO05D007609 1.9e-18 95.5 82 51.2
GSVIVG01034899001 Vitis vinifera HOM05D006114 ORTHO05D007609 1.9e-18 95.5 76 56.6
CSS0028797 Camellia sinensis var. sinensis HOM05D006114 ORTHO05D007609 2.5e-18 95.1 70 62.9
Prupe.8G025000 Prunus persica HOM05D006114 ORTHO05D007609 2.5e-18 95.1 76 55.3
VMungo0464G2055 Vigna mungo HOM05D006114 ORTHO05D007609 3.2e-18 94.7 75 56.0
FvH4_2g14200 Fragaria vesca HOM05D006114 ORTHO05D007609 4.2e-18 94.4 77 55.8
FAN15G0766 Fragaria x ananassa HOM05D006114 ORTHO05D007609 4.2e-18 94.4 77 55.8
FAN27G1342 Fragaria x ananassa HOM05D006114 ORTHO05D007609 4.2e-18 94.4 77 55.8
Hma1.2p1_0616F.1_g190010 Hydrangea macrophylla HOM05D006114 ORTHO05D007609 4.2e-18 94.4 76 56.6
PSO541G3056 Papaver somniferum HOM05D006114 ORTHO05D007609 4.2e-18 94.4 68 60.3
Zm00001eb268570 Zea mays HOM05D006114 ORTHO05D007609 4.2e-18 94.4 48 87.5
COL.COLO4_24672 Corchorus olitorius HOM05D006114 ORTHO05D007609 5.5e-18 94.0 82 50.0
ECA247G0840 Erigeron canadensis HOM05D006114 ORTHO05D007609 5.5e-18 94.0 78 55.1
FAN24G0263 Fragaria x ananassa HOM05D006114 ORTHO05D007609 7.2e-18 93.6 77 54.5
Gohir.D05G271900 Gossypium hirsutum HOM05D006114 ORTHO05D007609 7.2e-18 93.6 82 50.0
Gorai.009G284900 Gossypium raimondii HOM05D006114 ORTHO05D007609 7.2e-18 93.6 82 50.0
MD10G1022100 Malus domestica HOM05D006114 ORTHO05D007609 7.2e-18 93.6 76 53.9
Duzib116G0820 Durio zibethinus HOM05D006114 ORTHO05D007609 9.3e-18 93.2 80 50.0
MD05G1021300 Malus domestica HOM05D006114 ORTHO05D007609 9.3e-18 93.2 76 53.9
Potri.005G190400 Populus trichocarpa HOM05D006114 ORTHO05D007609 9.3e-18 93.2 70 58.6
Thecc.08G149100 Theobroma cacao HOM05D006114 ORTHO05D007609 9.3e-18 93.2 82 48.8
Duzib041G0274 Durio zibethinus HOM05D006114 ORTHO05D007609 1.2e-17 92.8 80 48.8
Phvul.004G097500 Phaseolus vulgaris HOM05D006114 ORTHO05D007609 1.2e-17 92.8 75 54.7
HanXRQChr02g0039921 Helianthus annuus HOM05D006114 ORTHO05D007609 1.6e-17 92.4 76 53.9
Psat0s3019g0080 Pisum sativum HOM05D006114 ORTHO05D007609 1.6e-17 92.4 77 54.5
Atru.chr13.2189 Acer truncatum HOM05D006114 ORTHO05D007609 2.1e-17 92.0 75 53.3
Ah.08g215970 Amaranthus hybridus HOM05D006114 ORTHO05D007609 2.1e-17 92.0 77 53.2
Glyma.02G083400 Glycine max HOM05D006114 ORTHO05D007609 2.1e-17 92.0 79 50.6
Lsat_1_v5_gn_1_8460 Lactuca sativa HOM05D006114 ORTHO05D007609 2.1e-17 92.0 78 52.6
MBI17_g34067_MAGBIO Magnolia biondii HOM05D006114 ORTHO05D007609 2.1e-17 92.0 67 56.7
TWI32G1226 Tripterygium wilfordii HOM05D006114 ORTHO05D007609 2.7e-17 91.7 77 50.6
Peaxi162Scf00263g01414 Petunia axillaris HOM05D006114 ORTHO05D007609 3.6e-17 91.3 74 55.4
Nitab4.5_0000032g0440 Nicotiana tabacum HOM05D006114 ORTHO05D007609 4.6e-17 90.9 74 55.4
Nitab4.5_0006608g0010 Nicotiana tabacum HOM05D006114 ORTHO05D007609 4.6e-17 90.9 74 55.4
CAN.G175.3 Capsicum annuum HOM05D006114 ORTHO05D007609 7.9e-17 90.1 74 54.1
DCAR_010096 Daucus carota HOM05D006114 ORTHO05D007609 7.9e-17 90.1 76 52.6
Solyc04g071130.1 Solanum lycopersicum HOM05D006114 ORTHO05D007609 7.9e-17 90.1 74 54.1
Sopen04g027070 Solanum pennellii HOM05D006114 ORTHO05D007609 7.9e-17 90.1 74 54.1
PGSC0003DMG400000797 Solanum tuberosum HOM05D006114 ORTHO05D007609 7.9e-17 90.1 74 54.1
TWI34G0188 Tripterygium wilfordii HOM05D006114 ORTHO05D007609 7.9e-17 90.1 77 48.1
CiPaw.16G014300 Carya illinoinensis HOM05D006114 ORTHO05D007609 3.0e-16 88.2 76 52.6
Cc10_g14550 Coffea canephora HOM05D006114 ORTHO05D007609 1.9e-15 85.5 76 48.7
Migut.C01010 Erythranthe guttata HOM05D006114 ORTHO05D007609 2.5e-15 85.1 74 50.0
MSTRG.1356 Avicennia marina HOM05D006114 ORTHO05D007609 4.3e-15 84.3 72 47.2
Oeu046020.2 Olea europaea HOM05D006114 ORTHO05D007609 4.3e-15 84.3 72 48.6
MSTRG.22368 Avicennia marina HOM05D006114 ORTHO05D007609 9.7e-15 83.2 72 48.6
SalBow7G1400 Salvia bowleyana HOM05D006114 ORTHO05D007609 9.7e-15 83.2 72 48.6
Manes.02G177800 Manihot esculenta HOM05D006114 ORTHO05D007609 1.3e-14 82.8 89 43.8
Oeu032982.1 Olea europaea HOM05D006114 ORTHO05D007609 2.2e-14 82.0 72 45.8
Lj7A371T46 Lonicera japonica HOM05D006114 ORTHO05D007609 2.0e-12 75.5 74 47.3
unitig_749.g13920 Utricularia gibba HOM05D006114 ORTHO05D007609 1.0e-11 73.2 72 41.7
Medtr6g049050 Medicago truncatula HOM05D006114 ORTHO05D007609 2.9e-11 71.6 69 49.3
Zm00001eb182860 Zea mays HOM05D006114 ORTHO05D007609 1.9e-10 68.9 32 93.8
TPR.G36696 Trifolium pratense HOM05D006114 ORTHO05D007609 5.5e-10 67.4 48 58.3
unitig_26.g9904 Utricularia gibba HOM05D006114 ORTHO05D007609 1.5e-07 59.3 60 41.7


User provided reference genes

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