Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb080520 Zea mays HOM05D007545 ORTHO05D009579 3.2e-71 273.5 142 100.0
Zm00001eb080530 Zea mays HOM05D007545 ORTHO05D009579 3.2e-71 273.5 142 100.0
Prupe.3G166000 Prunus persica HOM05D007545 ORTHO05D009579 3.9e-13 80.5 143 32.9
FAN26G0753 Fragaria x ananassa HOM05D007545 ORTHO05D009579 1.7e-11 75.1 146 34.2
RcHm_v2.0_Chr3g0491601 Rosa chinensis HOM05D007545 ORTHO05D009579 1.7e-11 75.1 146 34.9
TWI77G0027 Tripterygium wilfordii HOM05D007545 ORTHO05D009579 8.2e-11 72.8 146 32.9
Ciclev10011347m.g Citrus clementina HOM05D007545 ORTHO05D009579 2.4e-10 71.2 144 34.0
LjContig00141g0003453 Lotus japonicus HOM05D007545 ORTHO05D009579 2.4e-10 71.2 143 30.8
A06p06360 Brassica napus HOM05D007545 ORTHO05D009579 3.1e-10 70.9 145 31.7
CARHR009650 Cardamine hirsuta HOM05D007545 ORTHO05D009579 3.1e-10 70.9 145 33.1
Gohir.D08G049200 Gossypium hirsutum HOM05D007545 ORTHO05D009579 3.1e-10 70.9 145 31.0
Eucgr.F02875 Eucalyptus grandis HOM05D007545 ORTHO05D009579 7.0e-10 69.7 143 34.3
BraA06t23847Z Brassica rapa HOM05D007545 ORTHO05D009579 9.1e-10 69.3 145 31.0
FAN19G0914 Fragaria x ananassa HOM05D007545 ORTHO05D009579 1.2e-09 68.9 146 32.2
Carub.0001s0902 Capsella rubella HOM05D007545 ORTHO05D009579 1.6e-09 68.6 143 31.5
Thhalv10007116m.g Eutrema salsugineum HOM05D007545 ORTHO05D009579 2.0e-09 68.2 145 31.7
ATR0661G317 Amborella trichopoda HOM05D007545 ORTHO05D009579 3.5e-09 67.4 144 32.6
ClCG05G010640 Citrullus lanatus HOM05D007545 ORTHO05D009579 4.5e-09 67.0 142 28.2
Aa31LG1G5330 Aethionema arabicum HOM05D007545 ORTHO05D009579 5.9e-09 66.6 143 31.5
TAR371G0190 Trochodendron aralioides HOM05D007545 ORTHO05D009579 5.9e-09 66.6 124 33.1
MBI19_g08382_MAGBIO Magnolia biondii HOM05D007545 ORTHO05D009579 7.7e-09 66.2 137 32.1
PGR004G2599 Punica granatum HOM05D007545 ORTHO05D009579 7.7e-09 66.2 148 34.5
AT1G09680 Arabidopsis thaliana HOM05D007545 ORTHO05D009579 1.3e-08 65.5 145 29.7
C05p07760 Brassica napus HOM05D007545 ORTHO05D009579 1.7e-08 65.1 145 29.7
BolC5t29527H Brassica oleracea HOM05D007545 ORTHO05D009579 1.7e-08 65.1 145 29.7
Phvul.008G237700 Phaseolus vulgaris HOM05D007545 ORTHO05D009579 1.7e-08 65.1 147 33.3
CSS0045109 Camellia sinensis var. sinensis HOM05D007545 ORTHO05D009579 2.2e-08 64.7 140 28.6
CSS0047431 Camellia sinensis var. sinensis HOM05D007545 ORTHO05D009579 2.2e-08 64.7 140 28.6
Gorai.004G048700 Gossypium raimondii HOM05D007545 ORTHO05D009579 2.2e-08 64.7 142 30.3
AL1G20230 Arabidopsis lyrata HOM05D007545 ORTHO05D009579 2.9e-08 64.3 145 31.0
MD17G1268500 Malus domestica HOM05D007545 ORTHO05D009579 2.9e-08 64.3 124 32.3
Sp1g08270 Schrenkiella parvula HOM05D001024 ORTHO05D009579 2.9e-08 64.3 145 29.0
THA.LOC104805633 Tarenaya hassleriana HOM05D007545 ORTHO05D009579 3.8e-08 63.9 143 30.1
Actinidia06485 Actinidia chinensis HOM05D007545 ORTHO05D009579 5.0e-08 63.5 141 28.4
Glyma.02G243500 Glycine max HOM05D007545 ORTHO05D009579 1.1e-07 62.4 150 29.3
Nn3g18372 Nelumbo nucifera HOM05D007545 ORTHO05D009579 2.5e-07 61.2 131 29.0
Atru.chr1.1983 Acer truncatum HOM05D007545 ORTHO05D009579 3.2e-07 60.8 149 32.2
Cfa007791 Carpinus fangiana HOM05D007545 ORTHO05D009579 4.2e-07 60.5 124 33.1
TPR.G23654 Trifolium pratense HOM05D007545 ORTHO05D009579 5.5e-07 60.1 149 28.2
Sed0004069 Sechium edule HOM05D007545 ORTHO05D009579 7.2e-07 59.7 137 28.5
Medtr5g077930 Medicago truncatula HOM05D007545 ORTHO05D009579 1.6e-06 58.5 150 27.3
HPP92_026949 Vanilla planifolia HOM05D007545 ORTHO05D009579 1.6e-06 58.5 121 32.2
Nitab4.5_0004239g0030 Nicotiana tabacum HOM05D007545 ORTHO05D009579 2.7e-06 57.8 132 28.8
Psat2g047200 Pisum sativum HOM05D007545 ORTHO05D009579 2.7e-06 57.8 147 28.6
Sc14g0006910 Simmondsia chinensis HOM05D007545 ORTHO05D009579 3.6e-06 57.4 149 31.5
VMungo0647G0528 Vigna mungo HOM05D007545 ORTHO05D009579 3.6e-06 57.4 147 29.3
Migut.K00924 Erythranthe guttata HOM05D007545 ORTHO05D009579 4.7e-06 57.0 142 27.5
Gohir.D11G205366 Gossypium hirsutum HOM05D007545 ORTHO05D009579 4.7e-06 57.0 146 29.5
Rhsim10G0178600 Rhododendron simsii HOM05D007545 ORTHO05D009579 4.7e-06 57.0 143 28.7
Lalb_Chr10g0104281 Lupinus albus HOM05D007545 ORTHO05D009579 6.1e-06 56.6 152 30.9


User provided reference genes

Program Settings