Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb080230 Zea mays HOM05D000913 ORTHO05D000687 5.6e-78 294.3 157 100.0
Os04g0468600 Oryza sativa ssp. japonica HOM05D000913 ORTHO05D000687 1.4e-23 113.6 197 49.2
Os02g0582800 Oryza sativa ssp. japonica HOM05D000913 ORTHO05D000687 7.7e-19 97.8 182 43.4
Os02g0582600 Oryza sativa ssp. japonica HOM05D000913 ORTHO05D000687 2.6e-14 82.8 84 57.1
Zm00001eb245460 Zea mays HOM05D000913 ORTHO05D000687 7.5e-14 81.3 177 40.1
Gohir.D07G169300 Gossypium hirsutum HOM05D000913 ORTHO05D000687 2.8e-08 62.8 77 44.2
Gorai.001G189300 Gossypium raimondii HOM05D000913 ORTHO05D000687 2.8e-08 62.8 77 44.2
Thecc.01G201000 Theobroma cacao HOM05D000913 ORTHO05D000687 1.8e-07 60.1 79 43.0
Gohir.A07G162700 Gossypium hirsutum HOM05D000913 ORTHO05D000687 2.3e-07 59.7 84 40.5
Manes.13G059333 Manihot esculenta HOM05D000913 ORTHO05D000687 4.0e-07 58.9 93 39.8
Dinv16085 Davidia involucrata HOM05D000913 ORTHO05D000687 5.2e-07 58.5 78 47.4
Migut.E01774 Erythranthe guttata HOM05D000913 ORTHO05D000687 1.2e-06 57.4 76 44.7
SalBow5G0011 Salvia bowleyana HOM05D000913 ORTHO05D000687 1.5e-06 57.0 97 37.1
SalBow5G4967 Salvia bowleyana HOM05D000913 ORTHO05D000687 1.5e-06 57.0 97 37.1
Nn1g07601 Nelumbo nucifera HOM05D000913 ORTHO05D000687 2.0e-06 56.6 76 43.4
vmacro12050 Vaccinium macrocarpon HOM05D000913 ORTHO05D000687 2.0e-06 56.6 76 44.7
GSVIVG01030137001 Vitis vinifera HOM05D000913 ORTHO05D000687 2.0e-06 56.6 76 44.7
Glyma.09G016400 Glycine max HOM05D000913 ORTHO05D000687 2.6e-06 56.2 79 41.8
TWI63G0143 Tripterygium wilfordii HOM05D000913 ORTHO05D000687 3.4e-06 55.8 76 43.4
HanXRQChr11g0329801 Helianthus annuus HOM05D000913 ORTHO05D000687 4.4e-06 55.5 81 39.5
Potri.014G171300 Populus trichocarpa HOM05D000913 ORTHO05D000687 4.4e-06 55.5 85 37.6
TAR629G2544 Trochodendron aralioides HOM05D000913 ORTHO05D000687 4.4e-06 55.5 72 47.2
Gohir.A11G147300 Gossypium hirsutum HOM05D000913 ORTHO05D000687 5.8e-06 55.1 110 33.6
Gohir.D11G154000 Gossypium hirsutum HOM05D000913 ORTHO05D000687 5.8e-06 55.1 110 33.6
Gorai.007G164100 Gossypium raimondii HOM05D000913 ORTHO05D000687 5.8e-06 55.1 110 33.6
QL05p004788 Quercus lobata HOM05D000913 ORTHO05D000687 5.8e-06 55.1 79 43.0
QL05p005810 Quercus lobata HOM05D000913 ORTHO05D000687 5.8e-06 55.1 77 42.9
Haze_09888 Corylus avellana HOM05D000913 ORTHO05D000687 7.5e-06 54.7 82 37.8
Duzib138G0027 Durio zibethinus HOM05D000913 ORTHO05D000687 7.5e-06 54.7 82 37.8
MD03G1038100 Malus domestica HOM05D000913 ORTHO05D000687 7.5e-06 54.7 82 41.5
MD11G1039200 Malus domestica HOM05D000913 ORTHO05D000687 7.5e-06 54.7 82 41.5
Manes.12G067600 Manihot esculenta HOM05D000913 ORTHO05D000687 7.5e-06 54.7 73 43.8
Duzib138G1006 Durio zibethinus HOM05D000913 ORTHO05D000687 9.8e-06 54.3 82 37.8
HanXRQChr04g0126321 Helianthus annuus HOM05D000913 ORTHO05D000687 9.8e-06 54.3 119 34.5
MBI12_g26217_MAGBIO Magnolia biondii HOM05D000913 ORTHO05D000687 9.8e-06 54.3 80 41.2
QL08p002202 Quercus lobata HOM05D000913 ORTHO05D000687 9.8e-06 54.3 91 42.9
SalBow6G0242 Salvia bowleyana HOM05D000913 ORTHO05D000687 9.8e-06 54.3 73 43.8


User provided reference genes

Program Settings