Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb079980 Zea mays HOM05D003079 ORTHO05D003461 1.3e-86 323.2 180 100.0
Os04g0471300 Oryza sativa ssp. japonica HOM05D003079 ORTHO05D003461 2.1e-44 183.0 192 59.4
Zm00001eb316300 Zea mays HOM05D003079 ORTHO05D003461 8.0e-20 101.3 179 38.0
Os09g0481300 Oryza sativa ssp. japonica HOM05D003079 ORTHO05D003461 1.3e-17 94.0 177 36.2
Zm00001eb101670 Zea mays HOM05D003079 ORTHO05D003461 2.2e-17 93.2 178 36.5
Nitab4.5_0000152g0030 Nicotiana tabacum HOM05D003079 ORTHO05D003461 5.9e-15 85.1 177 30.5
Nitab4.5_0009408g0020 Nicotiana tabacum HOM05D003079 ORTHO05D003461 1.3e-14 84.0 177 29.9
Peaxi162Scf00232g00614 Petunia axillaris HOM05D003079 ORTHO05D003461 2.3e-14 83.2 177 31.1
HPP92_007490 Vanilla planifolia HOM05D003079 ORTHO05D003461 3.9e-14 82.4 182 33.5
Nn1g07629 Nelumbo nucifera HOM05D003079 ORTHO05D003461 3.3e-13 79.3 176 34.1
Aqoxy4G02267 Aquilegia oxysepala HOM05D003079 ORTHO05D003461 2.8e-12 76.3 179 34.1
Lj8C183T12 Lonicera japonica HOM05D003079 ORTHO05D003461 2.8e-12 76.3 131 35.1
TWI39G1230 Tripterygium wilfordii HOM05D003079 ORTHO05D003461 2.8e-12 76.3 180 32.8
HPP92_022810 Vanilla planifolia HOM05D003079 ORTHO05D003461 3.6e-12 75.9 152 34.9
TWI14G0136 Tripterygium wilfordii HOM05D003079 ORTHO05D003461 4.7e-12 75.5 180 32.8
MBI15_g44396_MAGBIO Magnolia biondii HOM05D003079 ORTHO05D003461 6.2e-12 75.1 177 32.2
PSO063G6668 Papaver somniferum HOM05D003079 ORTHO05D003461 6.2e-12 75.1 182 34.1
CAN.G623.75 Capsicum annuum HOM05D003079 ORTHO05D003461 1.8e-11 73.6 178 30.3
Os08g0497900 Oryza sativa ssp. japonica HOM05D003079 ORTHO05D003461 1.8e-11 73.6 150 34.7
TWI38G1795 Tripterygium wilfordii HOM05D003079 ORTHO05D003461 3.1e-11 72.8 182 33.0
PSO782G1655 Papaver somniferum HOM05D003079 ORTHO05D003461 5.2e-11 72.0 181 31.5
QL08p000493 Quercus lobata HOM05D003079 ORTHO05D003461 2.0e-10 70.1 175 31.4
TAR627G0159 Trochodendron aralioides HOM05D003079 ORTHO05D003461 2.0e-10 70.1 180 31.7
Manes.05G204700 Manihot esculenta HOM05D003079 ORTHO05D003461 3.4e-10 69.3 183 31.7
Sopen10g001680 Solanum pennellii HOM05D003079 ORTHO05D003461 3.4e-10 69.3 177 26.6
GSVIVG01014846001 Vitis vinifera HOM05D003079 ORTHO05D003461 4.4e-10 68.9 180 31.1
Duzib213G0264 Durio zibethinus HOM05D003079 ORTHO05D003461 9.8e-10 67.8 129 41.1
Potri.001G472000 Populus trichocarpa HOM05D003079 ORTHO05D003461 1.3e-09 67.4 183 29.0
Potri.011G169000 Populus trichocarpa HOM05D003079 ORTHO05D003461 1.7e-09 67.0 183 32.2
PGSC0003DMG400008693 Solanum tuberosum HOM05D003079 ORTHO05D003461 1.7e-09 67.0 177 26.0
MELO3C014061.2 Cucumis melo HOM05D003079 ORTHO05D003461 2.9e-09 66.2 177 29.4
Duzib268G0697 Durio zibethinus HOM05D003079 ORTHO05D003461 2.9e-09 66.2 183 31.7
Duzib170G0955 Durio zibethinus HOM05D003079 ORTHO05D003461 3.7e-09 65.9 183 33.3
Aqoxy7G02327 Aquilegia oxysepala HOM05D003079 ORTHO05D003461 4.9e-09 65.5 169 29.6
MSTRG.13045 Avicennia marina HOM05D003079 ORTHO05D003461 4.9e-09 65.5 180 30.0
Nitab4.5_0003570g0050 Nicotiana tabacum HOM05D003079 ORTHO05D003461 6.4e-09 65.1 177 29.4
ClCG00G001200 Citrullus lanatus HOM05D003079 ORTHO05D003461 8.3e-09 64.7 180 28.9
ClCG10G003930 Citrullus lanatus HOM05D003079 ORTHO05D003461 8.3e-09 64.7 180 28.9
MSTRG.16132 Avicennia marina HOM05D003079 ORTHO05D003461 1.9e-08 63.5 130 35.4
Nitab4.5_0002216g0030 Nicotiana tabacum HOM05D003079 ORTHO05D003461 1.9e-08 63.5 183 29.5
Nitab4.5_0000611g0170 Nicotiana tabacum HOM05D003079 ORTHO05D003461 3.2e-08 62.8 177 26.6
Thecc.07G001500 Theobroma cacao HOM05D003079 ORTHO05D003461 3.2e-08 62.8 183 31.1
Sopen07g034350 Solanum pennellii HOM05D003079 ORTHO05D003461 4.1e-08 62.4 132 33.3
FvH4_3g41590 Fragaria vesca HOM05D003079 ORTHO05D003461 5.4e-08 62.0 180 27.8
FAN11G0995 Fragaria x ananassa HOM05D003079 ORTHO05D003461 5.4e-08 62.0 180 27.8
Ciclev10007777m.g Citrus clementina HOM05D003079 ORTHO05D003461 7.0e-08 61.6 187 27.8
COL.COLO4_07790 Corchorus olitorius HOM05D003079 ORTHO05D003461 9.2e-08 61.2 146 33.6
ClCG10G003820 Citrullus lanatus HOM05D003079 ORTHO05D003461 1.2e-07 60.8 180 27.8
Gohir.A13G128400 Gossypium hirsutum HOM05D003079 ORTHO05D003461 2.0e-07 60.1 184 29.3
Actinidia30351 Actinidia chinensis HOM05D003079 ORTHO05D003461 2.7e-07 59.7 142 31.7
Gohir.D13G131800 Gossypium hirsutum HOM05D003079 ORTHO05D003461 2.7e-07 59.7 182 28.0
Nitab4.5_0001622g0150 Nicotiana tabacum HOM05D003079 ORTHO05D003461 2.7e-07 59.7 177 25.4
ATR0751G103 Amborella trichopoda HOM05D003079 ORTHO05D003461 3.5e-07 59.3 130 31.5
CAN.G492.58 Capsicum annuum HOM05D003079 ORTHO05D003461 3.5e-07 59.3 179 26.3
Sed0022199 Sechium edule HOM05D003079 ORTHO05D003461 3.5e-07 59.3 177 29.4
Aa31LG3G12120 Aethionema arabicum HOM05D003079 ORTHO05D003461 4.6e-07 58.9 180 30.0
CANSAT11G2157 Cannabis sativa HOM05D003079 ORTHO05D003461 4.6e-07 58.9 181 28.7
FAN21G1152 Fragaria x ananassa HOM05D003079 ORTHO05D003461 6.0e-07 58.5 181 27.1
FAN16G0740 Fragaria x ananassa HOM05D003079 ORTHO05D003461 1.0e-06 57.8 184 25.5
Gorai.013G147800 Gossypium raimondii HOM05D003079 ORTHO05D003461 1.0e-06 57.8 182 27.5
Sc03g0011780 Simmondsia chinensis HOM05D003079 ORTHO05D003461 1.0e-06 57.8 177 26.6
Oeu006261.2 Olea europaea HOM05D003079 ORTHO05D003461 1.3e-06 57.4 144 33.3
FAN25G3298 Fragaria x ananassa HOM05D003079 ORTHO05D003461 1.7e-06 57.0 186 27.4
RcHm_v2.0_Chr5g0074601 Rosa chinensis HOM05D003079 ORTHO05D003461 3.9e-06 55.8 181 27.1


User provided reference genes

Program Settings