Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb079910 Zea mays HOM05D003503 ORTHO05D003885 5.4e-114 414.5 228 100.0
Os04g0472700 Oryza sativa ssp. japonica HOM05D003503 ORTHO05D003885 1.1e-55 220.7 234 61.1
Zm00001eb245710 Zea mays HOM05D020767 ORTHO05D003885 2.2e-46 189.9 235 54.9
Os02g0591500 Oryza sativa ssp. japonica HOM05D020767 ORTHO05D003885 3.1e-37 159.5 243 49.4
Zm00001eb245720 Zea mays HOM05D020767 ORTHO05D003885 4.1e-29 132.5 236 46.6
Zm00001eb138790 Zea mays HOM05D020767 ORTHO05D003885 5.0e-19 99.0 89 55.1
FvH4_6g18600 Fragaria vesca HOM05D003503 ORTHO05D003885 1.2e-09 67.8 214 35.5
FAN14G4545 Fragaria x ananassa HOM05D003503 ORTHO05D003885 1.2e-09 67.8 214 35.5
FvH4_1g24920 Fragaria vesca HOM05D003503 ORTHO05D003885 3.6e-09 66.2 206 36.4
FAN23G1753 Fragaria x ananassa HOM05D003503 ORTHO05D003885 3.6e-09 66.2 206 36.4
FAN23G2494 Fragaria x ananassa HOM05D003503 ORTHO05D003885 3.6e-09 66.2 206 36.4
FAN26G0276 Fragaria x ananassa HOM05D003503 ORTHO05D003885 3.6e-09 66.2 206 36.4
FAN26G0411 Fragaria x ananassa HOM05D003503 ORTHO05D003885 3.6e-09 66.2 206 36.4
FAN05G1437 Fragaria x ananassa HOM05D003503 ORTHO05D003885 6.2e-09 65.5 185 36.8
FAN05G4212 Fragaria x ananassa HOM05D003503 ORTHO05D003885 2.3e-08 63.5 213 35.2
RcHm_v2.0_Chr3g0473181 Rosa chinensis HOM05D003503 ORTHO05D003885 3.1e-08 63.2 161 36.6
RcHm_v2.0_Chr3g0473161 Rosa chinensis HOM05D003503 ORTHO05D003885 4.0e-08 62.8 161 38.5
FAN02G2343 Fragaria x ananassa HOM05D003503 ORTHO05D003885 5.2e-08 62.4 213 34.7
HPP92_015769 Vanilla planifolia HOM05D020767 ORTHO05D003885 5.2e-08 62.4 153 36.6
MBI04_g14263_MAGBIO Magnolia biondii HOM05D000102 ORTHO05D000138 1.5e-07 60.8 224 33.9
MBI01_g36437_MAGBIO Magnolia biondii HOM05D003503 ORTHO05D003885 2.0e-07 60.5 241 29.0
Atru.chr1.937 Acer truncatum HOM05D003503 ORTHO05D003885 3.4e-07 59.7 188 34.6
FAN09G1919 Fragaria x ananassa HOM05D003503 ORTHO05D003885 7.6e-07 58.5 211 32.7
FAN19G1882 Fragaria x ananassa HOM05D003503 ORTHO05D003885 7.6e-07 58.5 197 34.0
Peaxi162Scf00285g00427 Petunia axillaris HOM05D003503 ORTHO05D003885 7.6e-07 58.5 199 30.7
COL.COLO4_28742 Corchorus olitorius HOM05D003503 ORTHO05D003885 1.3e-06 57.8 200 33.0
DCAR_024104 Daucus carota HOM05D003503 ORTHO05D003885 1.3e-06 57.8 185 35.7
Phvul.001G138700 Phaseolus vulgaris HOM05D003503 ORTHO05D003885 1.3e-06 57.8 232 31.0
Nitab4.5_0010571g0010 Nicotiana tabacum HOM05D003503 ORTHO05D003885 1.7e-06 57.4 217 30.0
Glyma.03G141800 Glycine max HOM05D003503 ORTHO05D003885 2.2e-06 57.0 241 32.4
Manes.03G008800 Manihot esculenta HOM05D003503 ORTHO05D003885 2.2e-06 57.0 192 35.9
VMungo1383G2219 Vigna mungo HOM05D003503 ORTHO05D003885 2.9e-06 56.6 231 30.3
Peaxi162Scf00406g00711 Petunia axillaris HOM05D003503 ORTHO05D003885 3.7e-06 56.2 255 29.0
EL10Ac3g06131 Beta vulgaris HOM05D003503 ORTHO05D003885 4.9e-06 55.8 193 32.6
TWI74G1092 Tripterygium wilfordii HOM05D003503 ORTHO05D003885 4.9e-06 55.8 227 30.8
Peaxi162Scf00258g00220 Petunia axillaris HOM05D003503 ORTHO05D003885 6.4e-06 55.5 227 30.0
MD12G1062400 Malus domestica HOM05D003503 ORTHO05D003885 8.4e-06 55.1 220 30.9
Sabra06G0041000 Salix brachista HOM05D003503 ORTHO05D003885 8.4e-06 55.1 212 32.1


User provided reference genes

Program Settings