Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb077930 Zea mays HOM05D003642 ORTHO05D004460 1.4e-209 732.6 365 100.0
Zm00001eb426190 Zea mays HOM05D003642 ORTHO05D004460 2.6e-166 589.0 380 81.8
Os04g0506800 Oryza sativa ssp. japonica HOM05D003642 ORTHO05D004460 1.4e-140 503.4 390 71.8
MBI01_g03598_MAGBIO Magnolia biondii HOM05D003642 ORTHO05D004460 1.3e-85 320.9 274 54.7
HPP92_006804 Vanilla planifolia HOM05D003642 ORTHO05D004460 4.2e-84 315.8 260 59.6
Aqoxy2G01228 Aquilegia oxysepala HOM05D003642 ORTHO05D004460 7.2e-84 315.1 276 54.3
Thecc.09G285800 Theobroma cacao HOM05D003642 ORTHO05D004460 6.1e-83 312.0 276 52.9
HPP92_025134 Vanilla planifolia HOM05D003642 ORTHO05D004460 3.0e-82 309.7 380 46.1
HPP92_026090 Vanilla planifolia HOM05D003642 ORTHO05D004460 3.9e-82 309.3 380 46.3
Atru.chr3.3290 Acer truncatum HOM05D003642 ORTHO05D004460 5.1e-82 308.9 277 53.8
MBI17_g01557_MAGBIO Magnolia biondii HOM05D003642 ORTHO05D004460 6.7e-82 308.5 274 53.6
Potri.004G184200 Populus trichocarpa HOM05D003642 ORTHO05D004460 8.8e-82 308.1 276 52.9
COL.COLO4_19910 Corchorus olitorius HOM05D003642 ORTHO05D004460 1.1e-81 307.8 276 53.3
ATR0820G225 Amborella trichopoda HOM05D003642 ORTHO05D004460 1.5e-81 307.4 305 49.5
CDE02G0744 Ceratophyllum demersum HOM05D003642 ORTHO05D004460 3.3e-81 306.2 274 52.9
Nn2g14115 Nelumbo nucifera HOM05D003642 ORTHO05D004460 1.3e-80 304.3 389 44.7
Eucgr.B03872 Eucalyptus grandis HOM05D003642 ORTHO05D004460 2.8e-80 303.1 276 55.8
Psat7g189000 Pisum sativum HOM05D003642 ORTHO05D004460 2.8e-80 303.1 276 54.0
Os01g0858900 Oryza sativa ssp. japonica HOM05D003642 ORTHO05D004460 3.7e-80 302.8 398 46.7
Sabra04G0123900 Salix brachista HOM05D003642 ORTHO05D004460 3.7e-80 302.8 276 52.2
TAR369G0447 Trochodendron aralioides HOM05D003642 ORTHO05D004460 3.7e-80 302.8 367 45.8
Lj3g0020685 Lotus japonicus HOM05D003642 ORTHO05D004460 4.8e-80 302.4 277 53.4
Lalb_Chr03g0028031 Lupinus albus HOM05D003642 ORTHO05D004460 4.8e-80 302.4 274 53.6
CDE08G0849 Ceratophyllum demersum HOM05D003642 ORTHO05D004460 6.3e-80 302.0 379 44.1
SEGI_33073 Sequoiadendron giganteum HOM05D003642 ORTHO05D004460 1.1e-79 301.2 298 51.3
CDE06G1048 Ceratophyllum demersum HOM05D003642 ORTHO05D004460 1.4e-79 300.8 272 51.5
Ca_19399_v3 Cicer arietinum L. HOM05D003642 ORTHO05D004460 1.4e-79 300.8 395 43.5
Manes.11G160800 Manihot esculenta HOM05D003642 ORTHO05D004460 1.8e-79 300.4 351 45.9
Glyma.11G184200 Glycine max HOM05D003642 ORTHO05D004460 2.4e-79 300.1 274 52.6
RcHm_v2.0_Chr5g0044221 Rosa chinensis HOM05D003642 ORTHO05D004460 2.4e-79 300.1 350 45.1
THA.LOC104826418 Tarenaya hassleriana HOM05D003642 ORTHO05D004460 2.4e-79 300.1 276 52.5
Duzib150G1635 Durio zibethinus HOM05D003642 ORTHO05D004460 3.1e-79 299.7 276 51.1
THA.LOC104800538 Tarenaya hassleriana HOM05D003642 ORTHO05D004460 3.1e-79 299.7 276 52.9
Zm00001eb366950 Zea mays HOM05D003642 ORTHO05D004460 3.1e-79 299.7 419 45.1
Duzib170G0814 Durio zibethinus HOM05D003642 ORTHO05D004460 4.1e-79 299.3 276 51.4
Potri.009G144000 Populus trichocarpa HOM05D003642 ORTHO05D004460 4.1e-79 299.3 340 45.6
Sabra09G0111700 Salix brachista HOM05D003642 ORTHO05D004460 5.3e-79 298.9 276 51.8
Sabra09G0114400 Salix brachista HOM05D003642 ORTHO05D004460 5.3e-79 298.9 276 51.8
Gorai.009G086400 Gossypium raimondii HOM05D003642 ORTHO05D004460 6.9e-79 298.5 274 51.5
VMungo1127G0822 Vigna mungo HOM05D003642 ORTHO05D004460 6.9e-79 298.5 275 53.1
Glyma.12G088200 Glycine max HOM05D003642 ORTHO05D004460 9.1e-79 298.1 275 52.0
Gohir.D07G113300 Gossypium hirsutum HOM05D003642 ORTHO05D004460 9.1e-79 298.1 276 51.8
Prupe.6G127500 Prunus persica HOM05D003642 ORTHO05D004460 9.1e-79 298.1 350 45.1
TPR.G17216 Trifolium pratense HOM05D003642 ORTHO05D004460 9.1e-79 298.1 355 45.1
HPP92_011490 Vanilla planifolia HOM05D003642 ORTHO05D004460 1.5e-78 297.4 402 42.3
Glyma.12G088100 Glycine max HOM05D003642 ORTHO05D004460 2.0e-78 297.0 274 53.3
Medtr4g053520 Medicago truncatula HOM05D003642 ORTHO05D004460 2.0e-78 297.0 385 43.4
Hma1.2p1_0305F.1_g119710 Hydrangea macrophylla HOM05D003642 ORTHO05D004460 3.4e-78 296.2 397 42.6
Hma1.2p1_0305F.1_g119720 Hydrangea macrophylla HOM05D003642 ORTHO05D004460 3.4e-78 296.2 397 42.6
Hma1.2p1_0578F.1_g182375 Hydrangea macrophylla HOM05D003642 ORTHO05D004460 3.4e-78 296.2 397 42.6
Manes.04G004900 Manihot esculenta HOM05D003642 ORTHO05D004460 3.4e-78 296.2 276 50.4
Phvul.011G093000 Phaseolus vulgaris HOM05D003642 ORTHO05D004460 3.4e-78 296.2 275 52.7
TWI31G0358 Tripterygium wilfordii HOM05D003642 ORTHO05D004460 3.4e-78 296.2 400 42.0
Gohir.A07G109500 Gossypium hirsutum HOM05D003642 ORTHO05D004460 4.5e-78 295.8 276 51.1
AUR62039222 Chenopodium quinoa HOM05D003642 ORTHO05D004460 5.9e-78 295.4 276 51.1
Gohir.A05G081500 Gossypium hirsutum HOM05D003642 ORTHO05D004460 5.9e-78 295.4 274 51.1
Cfa010037 Carpinus fangiana HOM05D003642 ORTHO05D004460 7.7e-78 295.0 277 52.3
TAR623G1689 Trochodendron aralioides HOM05D003642 ORTHO05D004460 7.7e-78 295.0 271 52.0
FAN16G3636 Fragaria x ananassa HOM05D003642 ORTHO05D004460 1.3e-77 294.3 276 51.4
Gorai.001G121600 Gossypium raimondii HOM05D003642 ORTHO05D004460 1.3e-77 294.3 276 51.4
Lj1A233T8 Lonicera japonica HOM05D003642 ORTHO05D004460 1.3e-77 294.3 276 51.1
Haze_23398 Corylus avellana HOM05D003642 ORTHO05D004460 1.7e-77 293.9 274 52.2
MD03G1142400 Malus domestica HOM05D003642 ORTHO05D004460 5.0e-77 292.4 398 42.0
ClCG02G022190 Citrullus lanatus HOM05D003642 ORTHO05D004460 6.5e-77 292.0 276 51.1
Ah.08g215830 Amaranthus hybridus HOM05D003642 ORTHO05D004460 8.5e-77 291.6 276 50.7
EL10Ac7g15808 Beta vulgaris HOM05D003642 ORTHO05D004460 8.5e-77 291.6 351 44.7
AUR62009777 Chenopodium quinoa HOM05D003642 ORTHO05D004460 1.4e-76 290.8 276 50.7
Nitab4.5_0002002g0040 Nicotiana tabacum HOM05D003642 ORTHO05D004460 1.9e-76 290.4 277 51.3
Actinidia07238 Actinidia chinensis HOM05D003642 ORTHO05D004460 2.5e-76 290.0 403 42.2
FAN21G1092 Fragaria x ananassa HOM05D003642 ORTHO05D004460 3.2e-76 289.7 392 42.1
Gorai.004G009500 Gossypium raimondii HOM05D003642 ORTHO05D004460 3.2e-76 289.7 277 50.2
Zm00001eb147290 Zea mays HOM05D003642 ORTHO05D004460 4.2e-76 289.3 400 45.2
HanXRQChr01g0024131 Helianthus annuus HOM05D003642 ORTHO05D004460 5.5e-76 288.9 276 50.0
PGR102G1012 Punica granatum HOM05D003642 ORTHO05D004460 5.5e-76 288.9 396 42.2
Sed0019020 Sechium edule HOM05D003642 ORTHO05D004460 5.5e-76 288.9 276 50.4
MELO3C021417.2 Cucumis melo HOM05D003642 ORTHO05D004460 7.2e-76 288.5 276 50.0
FAN25G1659 Fragaria x ananassa HOM05D003642 ORTHO05D004460 9.4e-76 288.1 392 41.8
MD11G1162900 Malus domestica HOM05D003642 ORTHO05D004460 9.4e-76 288.1 394 42.4
Eucgr.B03871 Eucalyptus grandis HOM05D003642 ORTHO05D004460 1.2e-75 287.7 264 53.4
Nitab4.5_0005324g0040 Nicotiana tabacum HOM05D003642 ORTHO05D004460 1.2e-75 287.7 277 51.3
SGA_v2.0_scaffold147G36369 Striga asiatica HOM05D003642 ORTHO05D004460 1.2e-75 287.7 392 42.9
Migut.D02354 Erythranthe guttata HOM05D003642 ORTHO05D004460 1.6e-75 287.3 276 51.4
PSO384G4986 Papaver somniferum HOM05D003642 ORTHO05D004460 1.6e-75 287.3 277 52.0
Lsat_1_v5_gn_6_40461 Lactuca sativa HOM05D003642 ORTHO05D004460 2.1e-75 287.0 276 49.6
Gohir.D05G084500 Gossypium hirsutum HOM05D003642 ORTHO05D004460 3.6e-75 286.2 274 50.0
Cc01_g09370 Coffea canephora HOM05D003642 ORTHO05D004460 1.0e-74 284.6 398 42.5
Sc12g0004420 Simmondsia chinensis HOM05D003642 ORTHO05D004460 1.0e-74 284.6 276 51.1
Ciclev10028611m.g Citrus clementina HOM05D003642 ORTHO05D004460 2.3e-74 283.5 276 49.3
CsaV3_6G015050 Cucumis sativus L. HOM05D003642 ORTHO05D004460 2.3e-74 283.5 353 43.3
Gohir.A08G004800 Gossypium hirsutum HOM05D003642 ORTHO05D004460 3.0e-74 283.1 277 49.1
HanXRQChr11g0346801 Helianthus annuus HOM05D003642 ORTHO05D004460 5.1e-74 282.3 388 41.8
Oeu002383.1 Olea europaea HOM05D003642 ORTHO05D004460 5.1e-74 282.3 398 41.5
Thhalv10007826m.g Eutrema salsugineum HOM05D003642 ORTHO05D004460 6.7e-74 282.0 277 49.5
Lsat_1_v5_gn_1_61681 Lactuca sativa HOM05D003642 ORTHO05D004460 6.7e-74 282.0 276 50.0
Sp1g06910 Schrenkiella parvula HOM05D003642 ORTHO05D004460 6.7e-74 282.0 277 49.1
SMO145G0137 Selaginella moellendorffii HOM05D003642 ORTHO05D004460 6.7e-74 282.0 289 47.8
SGA_v2.0_scaffold22G09875 Striga asiatica HOM05D003642 ORTHO05D004460 1.5e-73 280.8 271 50.2
Dinv29465 Davidia involucrata HOM05D003642 ORTHO05D004460 2.6e-73 280.0 258 51.2
ECA248G0168 Erigeron canadensis HOM05D003642 ORTHO05D002466 2.6e-73 280.0 276 49.3
Peaxi162Scf00091g00013 Petunia axillaris HOM05D003642 ORTHO05D004460 3.3e-73 279.6 276 48.9
Actinidia24206 Actinidia chinensis HOM05D003642 ORTHO05D004460 4.4e-73 279.3 256 52.0
BcaB07g34070 Brassica carinata HOM05D003642 ORTHO05D004460 4.4e-73 279.3 278 49.6
vmacro03307 Vaccinium macrocarpon HOM05D003642 ORTHO05D004460 5.7e-73 278.9 282 49.3
Zm00001eb196980 Zea mays HOM05D003642 ORTHO05D004460 7.4e-73 278.5 240 57.9
vmacro03309 Vaccinium macrocarpon HOM05D003642 ORTHO05D004460 1.7e-72 277.3 276 48.9
Rhsim13G0110400 Rhododendron simsii HOM05D003642 ORTHO05D004460 3.7e-72 276.2 352 42.6
vmacro03308 Vaccinium macrocarpon HOM05D003642 ORTHO05D004460 3.7e-72 276.2 360 41.9
CANSAT54G0701 Cannabis sativa HOM05D003642 ORTHO05D004460 8.2e-72 275.0 277 47.7
Glyma.12G088000 Glycine max HOM05D003642 ORTHO05D004460 8.2e-72 275.0 366 43.7
CSS0027733 Camellia sinensis var. sinensis HOM05D003642 ORTHO05D004460 1.1e-71 274.6 272 48.2
CSS0037628 Camellia sinensis var. sinensis HOM05D003642 ORTHO05D004460 1.1e-71 274.6 272 48.2
CiPaw.13G137400 Carya illinoinensis HOM05D003642 ORTHO05D004460 1.1e-71 274.6 404 40.8
DCAR_012184 Daucus carota HOM05D003642 ORTHO05D004460 1.1e-71 274.6 390 41.3
PGSC0003DMG400007143 Solanum tuberosum HOM05D003642 ORTHO05D004460 1.4e-71 274.2 399 40.4
Mapoly0005s0249 Marchantia polymorpha HOM05D003642 ORTHO05D004460 3.1e-71 273.1 279 50.2
Solyc06g074370.3 Solanum lycopersicum HOM05D003642 ORTHO05D004460 5.3e-71 272.3 398 39.9
HanXRQChr12g0364601 Helianthus annuus HOM05D003642 ORTHO05D004460 7.0e-71 271.9 276 50.4
CARHR008130 Cardamine hirsuta HOM05D003642 ORTHO05D004460 9.1e-71 271.6 277 48.0
arahy.Tifrunner.gnm1.ann1.H74NZW Arachis hypogaea HOM05D003642 ORTHO05D004460 1.2e-70 271.2 326 47.2
Sopen06g030830 Solanum pennellii HOM05D003642 ORTHO05D004460 1.6e-70 270.8 398 39.7
AT1G08280 Arabidopsis thaliana HOM05D003642 ORTHO05D004460 2.6e-70 270.0 277 48.0
MSTRG.18752 Avicennia marina HOM05D003642 ORTHO05D004460 2.6e-70 270.0 329 45.0
AL1G18680 Arabidopsis lyrata HOM05D003642 ORTHO05D004460 3.5e-70 269.6 279 48.0
Os12g0151500 Oryza sativa ssp. japonica HOM05D003642 ORTHO05D004460 4.5e-70 269.2 397 45.6
FvH4_3g24660 Fragaria vesca HOM05D003642 ORTHO05D004460 1.0e-69 268.1 374 41.2
AagrBONN_evm.TU.Sc2ySwM_228.2668 Anthoceros agrestis HOM05D003642 ORTHO05D004460 1.3e-69 267.7 273 46.5
PSO210G3660 Papaver somniferum HOM05D003642 ORTHO05D004460 1.3e-69 267.7 277 49.1
CAN.G919.22 Capsicum annuum HOM05D003642 ORTHO05D004460 2.2e-69 266.9 403 39.5
ECA233G1545 Erigeron canadensis HOM05D003642 ORTHO05D004460 3.8e-69 266.2 278 48.9
BcaB07g34071 Brassica carinata HOM05D003642 ORTHO05D004460 6.5e-69 265.4 280 47.9
C05p06380 Brassica napus HOM05D003642 ORTHO05D004460 8.5e-69 265.0 280 47.5
BraA06t23738Z Brassica rapa HOM05D003642 ORTHO05D004460 8.5e-69 265.0 278 47.8
BolC5t29393H Brassica oleracea HOM05D003642 ORTHO05D004460 1.5e-68 264.2 280 47.5
A06p05300 Brassica napus HOM05D003642 ORTHO05D004460 1.9e-68 263.8 278 47.8
QL01p012516 Quercus lobata HOM05D003642 ORTHO05D004460 4.2e-68 262.7 270 48.1
unitig_0.g1479 Utricularia gibba HOM05D003642 ORTHO05D004460 5.5e-68 262.3 276 48.2
TWI75G1212 Tripterygium wilfordii HOM05D003642 ORTHO05D004460 2.1e-67 260.4 343 42.3
SalBow6G1534 Salvia bowleyana HOM05D003642 ORTHO05D004460 4.7e-67 259.2 262 52.3
Rhsim13G0110200 Rhododendron simsii HOM05D003642 ORTHO05D004460 6.1e-67 258.8 282 47.2
Nn6g34944 Nelumbo nucifera HOM05D003642 ORTHO05D004460 1.8e-66 257.3 228 51.8
CSS0018533 Camellia sinensis var. sinensis HOM05D003642 ORTHO05D004460 3.0e-66 256.5 397 39.8
Mapoly0001s0264 Marchantia polymorpha HOM05D003642 ORTHO05D004460 5.2e-66 255.8 274 46.4
SMO331G0026 Selaginella moellendorffii HOM05D003642 ORTHO05D004460 9.7e-65 251.5 284 47.9
Carub.0001s0763 Capsella rubella HOM05D003642 ORTHO05D004460 3.7e-64 249.6 257 48.6
unitig_746.g26606 Utricularia gibba HOM05D003642 ORTHO05D004460 8.2e-64 248.4 275 46.2
Zm00001eb092710 Zea mays HOM05D003642 ORTHO05D004460 2.7e-62 243.4 243 55.1
arahy.Tifrunner.gnm1.ann1.U1TIAA Arachis hypogaea HOM05D003642 ORTHO05D004460 2.0e-57 227.3 200 53.5
unitig_899.g15371 Utricularia gibba HOM05D003642 ORTHO05D004460 2.6e-57 226.9 273 44.0
arahy.Tifrunner.gnm1.ann1.SR1X9W Arachis hypogaea HOM05D003642 ORTHO05D004460 6.3e-56 222.2 205 51.7
Pp3c14_26500 Physcomitrium patens HOM05D003642 ORTHO05D004460 5.9e-54 215.7 275 42.9
FAN11G1888 Fragaria x ananassa HOM05D003642 ORTHO05D004460 1.9e-52 210.7 373 36.2
CiPaw.14G101500 Carya illinoinensis HOM05D003642 ORTHO05D004460 3.2e-52 209.9 345 38.6
Mapoly0028s0144 Marchantia polymorpha HOM05D003642 ORTHO05D004460 5.5e-52 209.1 283 41.7
Mapoly0032s0065 Marchantia polymorpha HOM05D003642 ORTHO05D004460 2.3e-50 203.8 281 40.6
arahy.Tifrunner.gnm1.ann1.GDD8RQ Arachis hypogaea HOM05D003642 ORTHO05D004460 1.4e-47 194.5 199 47.7
TAR369G0931 Trochodendron aralioides HOM05D003642 ORTHO05D004460 7.0e-47 192.2 147 59.2
Lj1A242T18 Lonicera japonica HOM05D003642 ORTHO05D004460 1.4e-42 177.9 250 40.8
Cpa.g.sc32.97 Carica papaya HOM05D003642 ORTHO05D004460 1.4e-39 167.9 398 33.7
arahy.Tifrunner.gnm1.ann1.52W323 Arachis hypogaea HOM05D003642 ORTHO05D004460 1.0e-37 161.8 141 52.5
PSO339G5820 Papaver somniferum HOM05D003642 ORTHO05D004460 1.0e-37 161.8 123 60.2
GSVIVG01036150001 Vitis vinifera HOM05D003642 ORTHO05D004460 3.9e-37 159.8 396 31.3
unitig_899.g15372 Utricularia gibba HOM05D003642 ORTHO05D004460 2.0e-33 147.5 198 40.9
Gohir.D08G015066 Gossypium hirsutum HOM05D003642 ORTHO05D004460 7.5e-33 145.6 109 60.6
CBR_g16841 Chara braunii HOM05D003642 ORTHO05D004460 2.3e-29 134.0 227 34.4
CDE06G0775 Ceratophyllum demersum HOM05D003642 ORTHO05D004460 5.0e-29 132.9 98 58.2
Lj2C980T3 Lonicera japonica HOM05D003642 ORTHO05D004460 1.5e-25 121.3 401 28.9
Pp3c15_22480 Physcomitrium patens HOM05D003642 ORTHO05D004460 7.5e-25 119.0 165 36.4
CDE08G1668 Ceratophyllum demersum HOM05D003642 ORTHO05D003759 4.6e-22 109.8 133 42.9
CAN.G225.12 Capsicum annuum HOM05D003642 ORTHO05D004460 7.1e-15 85.9 75 52.0
Pp3c15_12330 Physcomitrium patens HOM05D003642 ORTHO05D004460 6.0e-14 82.8 126 34.9
Pp3c6_3550 Physcomitrium patens HOM05D003642 ORTHO05D004460 4.7e-11 73.2 90 44.4
Lalb_Chr19g0136571 Lupinus albus HOM05D003642 ORTHO05D004460 4.4e-09 66.6 49 59.2
CBR_g49970 Chara braunii HOM05D003642 ORTHO05D004460 1.3e-08 65.1 235 29.4
CBR_g39359 Chara braunii HOM05D000019 ORTHO05D000048 3.8e-08 63.5 186 31.2
CBR_g30491 Chara braunii HOM05D003642 ORTHO05D004460 9.3e-07 58.9 207 27.5
CBR_g49425 Chara braunii HOM05D000019 ORTHO05D000002 4.6e-06 56.6 69 49.3


User provided reference genes

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