Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb076710 Zea mays HOM05D007154 ORTHO05D008945 1.4e-56 222.6 109 100.0
Zm00001eb427080 Zea mays HOM05D007154 ORTHO05D008945 1.5e-53 212.6 109 94.5
Os04g0527700 Oryza sativa ssp. japonica HOM05D007154 ORTHO05D008945 1.1e-48 196.4 109 89.0
Atru.chr11.40 Acer truncatum HOM05D007154 ORTHO05D008945 1.6e-31 139.4 102 62.7
arahy.Tifrunner.gnm1.ann1.408I3G Arachis hypogaea HOM05D007154 ORTHO05D008945 1.4e-30 136.3 100 60.0
arahy.Tifrunner.gnm1.ann1.JHQS48 Arachis hypogaea HOM05D007154 ORTHO05D008945 1.4e-30 136.3 100 60.0
Manes.04G160900 Manihot esculenta HOM05D007154 ORTHO05D008945 1.8e-30 136.0 99 62.6
PGR142G2984 Punica granatum HOM05D007154 ORTHO05D008945 1.8e-30 136.0 102 59.8
Potri.010G254600 Populus trichocarpa HOM05D007154 ORTHO05D008945 5.2e-30 134.4 101 62.4
CDE04G0025 Ceratophyllum demersum HOM05D007154 ORTHO05D008945 6.8e-30 134.0 104 55.8
HPP92_003488 Vanilla planifolia HOM05D007154 ORTHO05D008945 1.2e-29 133.3 101 58.4
SalBow4G2238 Salvia bowleyana HOM05D007154 ORTHO05D008945 2.0e-29 132.5 106 57.5
Lj3g0022846 Lotus japonicus HOM05D007154 ORTHO05D008945 3.4e-29 131.7 107 56.1
Cfa018670 Carpinus fangiana HOM05D007154 ORTHO05D008945 4.4e-29 131.3 100 61.0
Nitab4.5_0007445g0030 Nicotiana tabacum HOM05D007154 ORTHO05D008945 4.4e-29 131.3 112 56.2
Sabra10G0198000 Salix brachista HOM05D007154 ORTHO05D008945 4.4e-29 131.3 101 60.4
Nitab4.5_0011708g0010 Nicotiana tabacum HOM05D007154 ORTHO05D008945 5.7e-29 131.0 112 57.1
Oeu019256.1 Olea europaea HOM05D007154 ORTHO05D008945 5.7e-29 131.0 105 56.2
CiPaw.16G000700 Carya illinoinensis HOM05D007154 ORTHO05D008945 7.5e-29 130.6 100 61.0
DCAR_030346 Daucus carota HOM05D007154 ORTHO05D008945 7.5e-29 130.6 107 61.7
Aqoxy3G04335 Aquilegia oxysepala HOM05D007154 ORTHO05D008945 9.8e-29 130.2 105 57.1
TWI53G1167 Tripterygium wilfordii HOM05D007154 ORTHO05D008945 9.8e-29 130.2 108 55.6
TAR371G0017 Trochodendron aralioides HOM05D007154 ORTHO05D008945 9.8e-29 130.2 105 57.1
CAN.G419.16 Capsicum annuum HOM05D007154 ORTHO05D008945 1.3e-28 129.8 113 54.9
Thhalv10005037m.g Eutrema salsugineum HOM05D007154 ORTHO05D008945 1.7e-28 129.4 107 56.1
Solyc04g008770.3 Solanum lycopersicum HOM05D007154 ORTHO05D008945 1.7e-28 129.4 112 55.4
Sopen04g003950 Solanum pennellii HOM05D007154 ORTHO05D008945 1.7e-28 129.4 112 55.4
Dinv01916 Davidia involucrata HOM05D007154 ORTHO05D008945 2.2e-28 129.0 108 59.3
Peaxi162Scf00329g00212 Petunia axillaris HOM05D007154 ORTHO05D008945 2.2e-28 129.0 112 54.5
Actinidia04367 Actinidia chinensis HOM05D007154 ORTHO05D008945 2.8e-28 128.6 101 57.4
MELO3C005082.2 Cucumis melo HOM05D007154 ORTHO05D008945 2.8e-28 128.6 103 57.3
Nitab4.5_0002707g0010 Nicotiana tabacum HOM05D007154 ORTHO05D008945 2.8e-28 128.6 112 54.5
THA.LOC104800635 Tarenaya hassleriana HOM05D007154 ORTHO05D008945 2.8e-28 128.6 107 55.1
Migut.B01210 Erythranthe guttata HOM05D007154 ORTHO05D008945 3.7e-28 128.3 110 57.3
Eucgr.G02613 Eucalyptus grandis HOM05D007154 ORTHO05D008945 3.7e-28 128.3 102 57.8
Lj3C844G3 Lonicera japonica HOM05D007154 ORTHO05D008945 3.7e-28 128.3 105 57.1
Prupe.1G351600 Prunus persica HOM05D007154 ORTHO05D008945 3.7e-28 128.3 100 59.0
Sp2g23770 Schrenkiella parvula HOM05D007154 ORTHO05D008945 3.7e-28 128.3 105 54.3
Ciclev10016869m.g Citrus clementina HOM05D007154 ORTHO05D008945 4.8e-28 127.9 102 57.8
Lalb_Chr01g0013651 Lupinus albus HOM05D007154 ORTHO05D008945 4.8e-28 127.9 102 57.8
Medtr8g020800 Medicago truncatula HOM05D007154 ORTHO05D008945 4.8e-28 127.9 96 59.4
PGSC0003DMG400025308 Solanum tuberosum HOM05D007154 ORTHO05D008945 4.8e-28 127.9 112 54.5
GSVIVG01034352001 Vitis vinifera HOM05D007154 ORTHO05D008945 6.3e-28 127.5 104 56.7
EL10Ac2g04490 Beta vulgaris HOM05D007154 ORTHO05D008945 8.3e-28 127.1 107 55.1
Phvul.010G129500 Phaseolus vulgaris HOM05D007154 ORTHO05D008945 1.1e-27 126.7 95 58.9
TPR.G36620 Trifolium pratense HOM05D007154 ORTHO05D008945 1.1e-27 126.7 96 61.5
Sc10g0006590 Simmondsia chinensis HOM05D007154 ORTHO05D008945 1.4e-27 126.3 111 60.4
VMungo0331G0746 Vigna mungo HOM05D007154 ORTHO05D008945 1.8e-27 125.9 99 58.6
AL6G34660 Arabidopsis lyrata HOM05D007154 ORTHO05D008945 3.1e-27 125.2 107 54.2
ECA240G2562 Erigeron canadensis HOM05D007154 ORTHO05D008945 3.1e-27 125.2 114 51.8
CANSAT78G1733 Cannabis sativa HOM05D007154 ORTHO05D008945 4.1e-27 124.8 105 54.3
Ca_23384_v3 Cicer arietinum L. HOM05D007154 ORTHO05D008945 4.1e-27 124.8 96 58.3
Nn3g18537 Nelumbo nucifera HOM05D007154 ORTHO05D008945 4.1e-27 124.8 108 55.6
QL01p000323 Quercus lobata HOM05D007154 ORTHO05D008945 4.1e-27 124.8 99 58.6
Thecc.02G152200 Theobroma cacao HOM05D007154 ORTHO05D008945 4.1e-27 124.8 109 56.0
Ah.10g037940 Amaranthus hybridus HOM05D007154 ORTHO05D008945 5.4e-27 124.4 100 56.0
MD13G1001100 Malus domestica HOM05D007154 ORTHO05D008945 5.4e-27 124.4 100 57.0
vmacro16164 Vaccinium macrocarpon HOM05D007154 ORTHO05D008945 5.4e-27 124.4 97 58.8
C07p44160 Brassica napus HOM05D007154 ORTHO05D008945 7.0e-27 124.0 109 54.1
BolC7t44940H Brassica oleracea HOM05D007154 ORTHO05D008945 7.0e-27 124.0 109 54.1
FAN07G0022 Fragaria x ananassa HOM05D007154 ORTHO05D008945 9.1e-27 123.6 104 57.7
FAN17G3039 Fragaria x ananassa HOM05D007154 ORTHO05D008945 9.1e-27 123.6 104 57.7
RcHm_v2.0_Chr4g0447181 Rosa chinensis HOM05D007154 ORTHO05D008945 1.2e-26 123.2 100 59.0
BcaNung03727 Brassica carinata HOM05D007154 ORTHO05D008945 1.6e-26 122.9 92 62.0
SGA_v2.0_scaffold166G38315 Striga asiatica HOM05D007154 ORTHO05D008945 1.6e-26 122.9 89 62.9
Gohir.D04G150000 Gossypium hirsutum HOM05D007154 ORTHO05D008945 2.7e-26 122.1 102 56.9
Gorai.012G136600 Gossypium raimondii HOM05D007154 ORTHO05D008945 2.7e-26 122.1 102 56.9
PSO063G0981 Papaver somniferum HOM05D007154 ORTHO05D008945 2.7e-26 122.1 106 51.9
PSO782G0712 Papaver somniferum HOM05D007154 ORTHO05D008945 2.7e-26 122.1 106 51.9
ClCG01G007940 Citrullus lanatus HOM05D007154 ORTHO05D008945 3.5e-26 121.7 107 54.2
Cc00_g03880 Coffea canephora HOM05D007154 ORTHO05D008945 3.5e-26 121.7 112 51.8
CSS0036440 Camellia sinensis var. sinensis HOM05D007154 ORTHO05D008945 4.5e-26 121.3 106 55.7
Psat4g220160 Pisum sativum HOM05D007154 ORTHO05D008945 4.5e-26 121.3 95 56.8
SGA_v2.0_scaffold249G44952 Striga asiatica HOM05D007154 ORTHO05D008945 4.5e-26 121.3 88 62.5
Aa31LG11G2830 Aethionema arabicum HOM05D007154 ORTHO05D008945 5.9e-26 120.9 105 53.3
A06p34370 Brassica napus HOM05D007154 ORTHO05D008945 5.9e-26 120.9 109 53.2
BraA06t26367Z Brassica rapa HOM05D007154 ORTHO05D008945 5.9e-26 120.9 109 53.2
Sed0008143 Sechium edule HOM05D007154 ORTHO05D008945 1.0e-25 120.2 104 52.9
ATR0124G040 Amborella trichopoda HOM05D007154 ORTHO05D008945 1.3e-25 119.8 101 55.4
AT5G23395 Arabidopsis thaliana HOM05D007154 ORTHO05D008945 1.3e-25 119.8 107 51.4
AUR62023198 Chenopodium quinoa HOM05D007154 ORTHO05D008945 1.3e-25 119.8 108 53.7
FvH4_4g37330 Fragaria vesca HOM05D007154 ORTHO05D008945 1.3e-25 119.8 98 59.2
Carub.0006s2118 Capsella rubella HOM05D007154 ORTHO05D008945 1.7e-25 119.4 83 62.7
Lsat_1_v5_gn_9_117140 Lactuca sativa HOM05D007154 ORTHO05D008945 2.3e-25 119.0 108 52.8
Glyma.07G039300 Glycine max HOM05D007154 ORTHO05D008945 2.9e-25 118.6 96 57.3
HPP92_026886 Vanilla planifolia HOM05D007154 ORTHO05D008945 2.9e-25 118.6 78 62.8
AUR62023245 Chenopodium quinoa HOM05D007154 ORTHO05D008945 5.0e-25 117.9 101 54.5
CsaV3_5G021910 Cucumis sativus L. HOM05D007154 ORTHO05D008945 5.0e-25 117.9 107 52.3
COL.COLO4_33150 Corchorus olitorius HOM05D007154 ORTHO05D008945 1.1e-24 116.7 109 52.3
CARHR190110 Cardamine hirsuta HOM05D007154 ORTHO05D008945 1.5e-24 116.3 72 68.1
Gohir.A04G109800 Gossypium hirsutum HOM05D007154 ORTHO05D008945 5.5e-24 114.4 95 57.9
Rhsim07G0213000 Rhododendron simsii HOM05D000003 ORTHO05D008945 5.5e-24 114.4 98 54.1
HanXRQChr13g0420721 Helianthus annuus HOM05D007154 ORTHO05D008945 2.1e-23 112.5 112 47.3
Hund16199 Selenicereus undatus HOM05D007154 ORTHO05D008945 2.1e-23 112.5 102 53.9
Glyma.16G008100 Glycine max HOM05D007154 ORTHO05D008945 5.2e-22 107.8 87 58.6
unitig_61.g26453 Utricularia gibba HOM05D007154 ORTHO05D008945 3.4e-21 105.1 91 51.6
Cpa.g.sc221.16 Carica papaya HOM05D007154 ORTHO05D008945 7.5e-21 104.0 96 51.0
TAR371G0737 Trochodendron aralioides HOM05D007154 ORTHO05D008945 1.3e-20 103.2 77 58.4
SHI21164 Sapria himalayana HOM05D007154 ORTHO05D008945 2.8e-20 102.1 99 51.5
Haze_17398 Corylus avellana HOM05D007154 ORTHO05D008945 4.1e-19 98.2 100 50.0
Duzib248G1404 Durio zibethinus HOM05D007154 ORTHO05D008945 1.0e-17 93.6 63 61.9
Pp3c11_17450 Physcomitrium patens HOM05D007154 ORTHO05D008945 2.9e-17 92.0 71 54.9
TAR627G0850 Trochodendron aralioides HOM05D007154 ORTHO05D008945 1.2e-15 86.7 60 61.7
TAR622G0969 Trochodendron aralioides HOM05D007154 ORTHO05D008945 8.9e-14 80.5 82 51.2
Cfa026739 Carpinus fangiana HOM05D007154 ORTHO05D008945 5.8e-13 77.8 79 40.5
Oeu037446.1 Olea europaea HOM05D007154 ORTHO05D008945 1.7e-12 76.3 73 52.1
Mapoly0093s0036 Marchantia polymorpha HOM05D007154 ORTHO05D008945 6.4e-12 74.3 70 42.9
AagrBONN_evm.TU.Sc2ySwM_362.2201 Anthoceros agrestis HOM05D007154 ORTHO05D008945 7.8e-10 67.4 65 44.6
Duzib051G0001 Durio zibethinus HOM05D007154 ORTHO05D008945 1.7e-09 66.2 47 57.4
MCO07G261 Micromonas commoda HOM05D007154 ORTHO05D008945 1.7e-09 66.2 73 42.5
SEGI_35140 Sequoiadendron giganteum HOM05D007154 ORTHO05D008945 5.6e-08 61.2 47 46.8


User provided reference genes

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