Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb073430 Zea mays HOM05D006822 ORTHO05D008884 0.0e+00 1147.9 674 100.0
Os04g0574600 Oryza sativa ssp. japonica HOM05D006822 ORTHO05D008884 4.7e-238 828.2 668 75.9
Ciclev10019178m.g Citrus clementina HOM05D006822 ORTHO05D008884 4.5e-148 529.3 692 49.6
vmacro13383 Vaccinium macrocarpon HOM05D006822 ORTHO05D008884 4.2e-146 522.7 685 48.3
Rhsim07G0025500 Rhododendron simsii HOM05D006822 ORTHO05D008884 2.7e-145 520.0 676 51.5
HPP92_015074 Vanilla planifolia HOM05D006822 ORTHO05D008884 6.0e-145 518.8 695 48.1
GSVIVG01027532001 Vitis vinifera HOM05D006822 ORTHO05D008884 2.3e-144 516.9 675 50.2
CiPaw.01G260400 Carya illinoinensis HOM05D006822 ORTHO05D008884 2.5e-143 513.5 680 48.8
CSS0016394 Camellia sinensis var. sinensis HOM05D006822 ORTHO05D008884 2.1e-142 510.4 666 53.3
Aqoxy7G00564 Aquilegia oxysepala HOM05D006822 ORTHO05D008884 2.4e-141 506.9 670 48.2
Manes.01G264800 Manihot esculenta HOM05D006822 ORTHO05D008884 1.5e-140 504.2 693 48.1
ClCG05G002100 Citrullus lanatus HOM05D006822 ORTHO05D008884 2.6e-140 503.4 680 51.0
Lj7A526T89 Lonicera japonica HOM05D006822 ORTHO05D008884 2.6e-140 503.4 672 50.7
MD02G1201200 Malus domestica HOM05D006822 ORTHO05D008884 3.4e-140 503.1 682 49.4
Haze_16833 Corylus avellana HOM05D006822 ORTHO05D008884 7.6e-140 501.9 674 49.6
Ah.05g175170 Amaranthus hybridus HOM05D006822 ORTHO05D008884 1.7e-139 500.7 696 50.4
CsaV3_3G009540 Cucumis sativus L. HOM05D006822 ORTHO05D008884 1.7e-139 500.7 687 52.8
Hma1.2p1_0053F.1_g030830 Hydrangea macrophylla HOM05D006822 ORTHO05D008884 1.7e-139 500.7 681 47.7
Cfa001701 Carpinus fangiana HOM05D006822 ORTHO05D008884 2.9e-139 500.0 679 47.6
MELO3C006175.2 Cucumis melo HOM05D006822 ORTHO05D008884 6.5e-139 498.8 688 52.6
Thecc.01G374100 Theobroma cacao HOM05D006822 ORTHO05D008884 1.4e-138 497.7 675 50.2
TAR375G1023 Trochodendron aralioides HOM05D006822 ORTHO05D008884 1.4e-138 497.7 684 48.4
Hund27354 Selenicereus undatus HOM05D006822 ORTHO05D008884 1.9e-138 497.3 691 50.4
Peaxi162Scf00021g01312 Petunia axillaris HOM05D006822 ORTHO05D008884 4.2e-138 496.1 713 44.0
AUR62013615 Chenopodium quinoa HOM05D006822 ORTHO05D008884 5.5e-138 495.7 690 47.5
Atru.chr5.328 Acer truncatum HOM05D006822 ORTHO05D008884 7.1e-138 495.4 684 48.8
Gorai.004G041400 Gossypium raimondii HOM05D006822 ORTHO05D008884 4.6e-137 492.7 669 50.1
Gohir.D08G042800 Gossypium hirsutum HOM05D006822 ORTHO05D008884 2.3e-136 490.3 666 50.0
EL10Ac1g00937 Beta vulgaris HOM05D006822 ORTHO05D008884 3.9e-136 489.6 693 50.1
Gohir.A08G031700 Gossypium hirsutum HOM05D006822 ORTHO05D008884 5.1e-136 489.2 671 51.3
Sc23g0003500 Simmondsia chinensis HOM05D006822 ORTHO05D008884 4.3e-135 486.1 701 48.1
Potri.002G149800 Populus trichocarpa HOM05D006822 ORTHO05D008884 1.6e-134 484.2 694 48.0
PGSC0003DMG401012750 Solanum tuberosum HOM05D006822 ORTHO05D008884 1.6e-134 484.2 696 48.3
Lalb_Chr01g0021331 Lupinus albus HOM05D006822 ORTHO05D008884 2.2e-134 483.8 679 42.7
AUR62004233 Chenopodium quinoa HOM05D006822 ORTHO05D008884 3.7e-134 483.0 684 47.4
Sabra02G0118500 Salix brachista HOM05D006822 ORTHO05D008884 4.8e-134 482.6 690 47.8
Glyma.09G267800 Glycine max HOM05D006822 ORTHO05D008884 1.8e-133 480.7 687 44.4
HanXRQChr04g0122211 Helianthus annuus HOM05D006822 ORTHO05D008884 4.1e-133 479.6 679 49.8
Nitab4.5_0004320g0040 Nicotiana tabacum HOM05D006822 ORTHO05D008884 4.1e-133 479.6 684 44.9
Migut.B01651 Erythranthe guttata HOM05D006822 ORTHO05D008884 9.0e-133 478.4 689 49.5
Solyc01g091510.4 Solanum lycopersicum HOM05D006822 ORTHO05D008884 9.0e-133 478.4 696 48.4
CANSAT56G1004 Cannabis sativa HOM05D006822 ORTHO05D008884 1.2e-132 478.0 692 50.6
Cc02_g36520 Coffea canephora HOM05D006822 ORTHO05D008884 1.2e-132 478.0 694 50.0
Duzib133G0703 Durio zibethinus HOM05D006822 ORTHO05D008884 1.2e-132 478.0 695 50.4
Sed0020963 Sechium edule HOM05D006822 ORTHO05D008884 1.2e-132 478.0 679 50.4
Ca_07832_v3 Cicer arietinum L. HOM05D006822 ORTHO05D008884 1.5e-132 477.6 679 44.6
CAN.G170.5 Capsicum annuum HOM05D006822 ORTHO05D008884 2.6e-132 476.9 689 46.9
Lsat_1_v5_gn_7_7481 Lactuca sativa HOM05D006822 ORTHO05D008884 4.5e-132 476.1 674 48.8
PSO478G2587 Papaver somniferum HOM05D006822 ORTHO05D008884 5.9e-132 475.7 692 45.1
Sopen01g037280 Solanum pennellii HOM05D006822 ORTHO05D008884 5.9e-132 475.7 696 48.1
Eucgr.D02443 Eucalyptus grandis HOM05D006822 ORTHO05D008884 1.3e-131 474.6 693 51.4
Dinv32391 Davidia involucrata HOM05D004001 ORTHO05D004559 2.9e-131 473.4 514 51.2
SGA_v2.0_scaffold95G28889 Striga asiatica HOM05D006822 ORTHO05D008884 3.8e-131 473.0 674 51.9
Oeu003493.1 Olea europaea HOM05D006822 ORTHO05D008884 5.0e-131 472.6 706 48.3
Cpa.g.sc18.138 Carica papaya HOM05D006822 ORTHO05D008884 1.1e-130 471.5 683 46.4
PGR031G1001 Punica granatum HOM05D006822 ORTHO05D008884 3.2e-130 469.9 680 49.6
Glyma.18G222100 Glycine max HOM05D006822 ORTHO05D008884 7.2e-130 468.8 688 44.0
TWI14G1233 Tripterygium wilfordii HOM05D006822 ORTHO05D008884 7.2e-130 468.8 698 49.3
QL08p051944 Quercus lobata HOM05D006822 ORTHO05D008884 9.4e-130 468.4 679 49.9
Prupe.2G147600 Prunus persica HOM05D006822 ORTHO05D008884 1.6e-129 467.6 521 52.0
CDE11G0821 Ceratophyllum demersum HOM05D006822 ORTHO05D008884 2.1e-129 467.2 525 49.1
THA.LOC104817014 Tarenaya hassleriana HOM05D006822 ORTHO05D008884 2.7e-129 466.8 669 46.5
MBI04_g46545_MAGBIO Magnolia biondii HOM05D006822 ORTHO05D008884 3.6e-129 466.5 587 54.0
VMungo1383G2566 Vigna mungo HOM05D006822 ORTHO05D008884 3.0e-128 463.4 690 44.6
Phvul.008G075100 Phaseolus vulgaris HOM05D006822 ORTHO05D008884 5.1e-128 462.6 680 44.6
COL.COLO4_12575 Corchorus olitorius HOM05D006822 ORTHO05D008884 7.4e-127 458.8 673 46.8
arahy.Tifrunner.gnm1.ann1.K16L32 Arachis hypogaea HOM05D006822 ORTHO05D008884 1.4e-125 454.5 680 48.1
Lj1g0013249 Lotus japonicus HOM05D006822 ORTHO05D008884 1.4e-125 454.5 678 44.1
arahy.Tifrunner.gnm1.ann1.485MU0 Arachis hypogaea HOM05D006822 ORTHO05D008884 2.4e-125 453.8 674 44.4
Hma1.2p1_0053F.1_g030820 Hydrangea macrophylla HOM05D006822 ORTHO05D008884 5.3e-125 452.6 529 49.3
Nn1g01174 Nelumbo nucifera HOM05D006822 ORTHO05D008884 5.3e-125 452.6 584 47.1
TPR.G26925 Trifolium pratense HOM05D006822 ORTHO05D008884 3.4e-124 449.9 688 45.3
Nitab4.5_0013912g0010 Nicotiana tabacum HOM05D006822 ORTHO05D008884 1.3e-123 448.0 535 46.5
RcHm_v2.0_Chr1g0350861 Rosa chinensis HOM05D006822 ORTHO05D008884 1.3e-123 448.0 526 50.0
FvH4_7g12110 Fragaria vesca HOM05D006822 ORTHO05D008884 4.2e-122 443.0 510 50.0
FAN06G2864 Fragaria x ananassa HOM05D006822 ORTHO05D008884 1.6e-121 441.0 510 50.0
FAN01G0942 Fragaria x ananassa HOM05D006822 ORTHO05D008884 2.7e-121 440.3 513 49.5
Psat3g115280 Pisum sativum HOM05D006822 ORTHO05D008884 2.7e-121 440.3 675 45.8
Medtr7g075170 Medicago truncatula HOM05D006822 ORTHO05D008884 7.9e-121 438.7 678 44.8
AT1G01930 Arabidopsis thaliana HOM05D006822 ORTHO05D008884 5.7e-119 432.6 497 48.1
Actinidia31423 Actinidia chinensis HOM05D006822 ORTHO05D008884 1.8e-117 427.6 664 43.7
unitig_22.g5376 Utricularia gibba HOM05D006822 ORTHO05D008884 7.7e-116 422.2 675 44.7
Aa31LG1G11250 Aethionema arabicum HOM05D006822 ORTHO05D008884 1.3e-115 421.4 705 44.7
Sp1g00370 Schrenkiella parvula HOM05D006822 ORTHO05D008884 4.7e-113 412.9 493 46.5
AL1G10390 Arabidopsis lyrata HOM05D006822 ORTHO05D008884 4.4e-111 406.4 500 46.8
Carub.0001s0031 Capsella rubella HOM05D006822 ORTHO05D008884 5.7e-111 406.0 497 46.7
Thhalv10007219m.g Eutrema salsugineum HOM05D006822 ORTHO05D008884 8.2e-110 402.1 502 46.0
Lsat_1_v5_gn_3_133341 Lactuca sativa HOM05D006822 ORTHO05D008884 6.5e-107 392.5 505 44.0
Medtr7g075185 Medicago truncatula HOM05D006822 ORTHO05D008884 6.5e-107 392.5 520 45.2
ECA236G3401 Erigeron canadensis HOM05D006822 ORTHO05D008884 1.2e-105 388.3 437 49.9
SEGI_38546 Sequoiadendron giganteum HOM05D006822 ORTHO05D008884 4.7e-105 386.3 692 38.7
CSS0048598 Camellia sinensis var. sinensis HOM05D006822 ORTHO05D008884 6.8e-104 382.5 584 49.8
HanXRQChr13g0425441 Helianthus annuus HOM05D006822 ORTHO05D008884 8.8e-104 382.1 504 45.0
BraA09t42269Z Brassica rapa HOM05D006822 ORTHO05D008884 4.8e-102 376.3 504 43.5
C08p53940 Brassica napus HOM05D006822 ORTHO05D008884 8.3e-102 375.6 504 44.2
BolC8t52907H Brassica oleracea HOM05D006822 ORTHO05D008884 8.3e-102 375.6 504 44.2
Eucgr.L02337 Eucalyptus grandis HOM05D006822 ORTHO05D008884 3.2e-98 363.6 602 48.0
ATR0757G063 Amborella trichopoda HOM05D006822 ORTHO05D008884 1.2e-92 345.1 374 51.3
Mapoly0008s0196 Marchantia polymorpha HOM05D006822 ORTHO05D008884 5.9e-92 342.8 706 42.2
ECA240G3107 Erigeron canadensis HOM05D006822 ORTHO05D008884 2.3e-88 330.9 416 45.4
FAN03G3111 Fragaria x ananassa HOM05D006822 ORTHO05D008884 1.4e-85 321.6 510 41.6
Pp3c3_38070 Physcomitrium patens HOM05D006822 ORTHO05D008884 9.5e-82 308.9 523 39.0
AagrBONN_evm.TU.Sc2ySwM_117.565 Anthoceros agrestis HOM05D006822 ORTHO05D008884 4.9e-78 296.6 448 41.7
COL.COLO4_05508 Corchorus olitorius HOM05D006822 ORTHO05D008884 1.9e-77 294.7 354 48.0
Cre07.g325715 Chlamydomonas reinhardtii HOM05D006822 ORTHO05D008884 3.2e-61 240.7 570 33.5
CARHR000420 Cardamine hirsuta HOM05D006822 ORTHO05D008884 2.4e-56 224.6 298 45.6
FAN10G0810 Fragaria x ananassa HOM05D006822 ORTHO05D008884 1.3e-51 208.8 234 49.1
CARHR000430 Cardamine hirsuta HOM05D006822 ORTHO05D008884 8.1e-49 199.5 222 49.1
SEGI_35234 Sequoiadendron giganteum HOM05D006822 ORTHO05D008884 5.6e-42 176.8 231 42.9
PRCOL_00005597 Prasinoderma coloniale HOM05D006822 ORTHO05D008884 7.9e-36 156.4 357 33.9
Cfa022202 Carpinus fangiana HOM05D006822 ORTHO05D004559 3.5e-28 131.0 565 25.8
Medtr7g075430 Medicago truncatula HOM05D006822 ORTHO05D008884 8.2e-17 93.2 164 36.0
ATR0757G024 Amborella trichopoda HOM05D006822 ORTHO05D004559 2.3e-11 75.1 201 53.7
arahy.Tifrunner.gnm1.ann1.EYK22X Arachis hypogaea HOM05D006822 ORTHO05D008884 5.1e-11 73.9 50 62.0
Medtr7g075450 Medicago truncatula HOM05D006822 ORTHO05D008884 5.0e-06 57.4 88 39.8


User provided reference genes

Program Settings