Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb072950 Zea mays HOM05D004897 ORTHO05D005928 2.4e-67 258.8 146 100.0
Zm00001eb068130 Zea mays HOM05D004897 ORTHO05D005928 3.6e-63 245.0 142 97.2
Zm00001eb168530 Zea mays HOM05D004897 ORTHO05D005928 4.3e-48 194.9 110 96.4
Zm00001eb243110 Zea mays HOM05D004897 ORTHO05D005928 4.3e-48 194.9 110 96.4
Zm00001eb381910 Zea mays HOM05D004897 ORTHO05D005928 4.3e-48 194.9 110 96.4
Zm00001eb382530 Zea mays HOM05D004897 ORTHO05D005928 4.3e-48 194.9 110 96.4
Zm00001eb280830 Zea mays HOM05D004897 ORTHO05D005928 2.9e-44 182.2 101 98.0
Zm00001eb382330 Zea mays HOM05D004897 ORTHO05D005928 1.0e-41 173.7 103 92.2
Os04g0652500 Oryza sativa ssp. japonica HOM05D004897 ORTHO05D005928 2.5e-40 169.1 146 68.5
CDE05G2998 Ceratophyllum demersum HOM05D004897 ORTHO05D005928 4.3e-32 141.7 145 53.8
Eucgr.B00942 Eucalyptus grandis HOM05D004897 ORTHO05D005928 1.7e-31 139.8 145 53.8
Nn4g24194 Nelumbo nucifera HOM05D004897 ORTHO05D005928 4.8e-31 138.3 145 53.1
PGSC0003DMG400005743 Solanum tuberosum HOM05D004897 ORTHO05D005928 4.8e-31 138.3 122 62.3
TAR622G0961 Trochodendron aralioides HOM05D004897 ORTHO05D005928 4.8e-31 138.3 145 52.4
GSVIVG01008418001 Vitis vinifera HOM05D004897 ORTHO05D005928 8.2e-31 137.5 110 68.2
PSO017G1741 Papaver somniferum HOM05D004897 ORTHO05D005928 1.1e-30 137.1 145 52.4
CSS0030961 Camellia sinensis var. sinensis HOM05D004897 ORTHO05D005928 1.8e-30 136.3 145 54.5
Lj9C421G3 Lonicera japonica HOM05D004897 ORTHO05D005928 3.1e-30 135.6 125 60.8
DCAR_014009 Daucus carota HOM05D004897 ORTHO05D005928 4.1e-30 135.2 145 52.4
CAN.G1129.49 Capsicum annuum HOM05D004897 ORTHO05D005928 9.1e-30 134.0 145 53.1
PSO478G0546 Papaver somniferum HOM05D004897 ORTHO05D005928 9.1e-30 134.0 145 51.0
Cfa019677 Carpinus fangiana HOM05D004897 ORTHO05D005928 1.5e-29 133.3 145 52.4
Sabra15G0057300 Salix brachista HOM05D004897 ORTHO05D005928 1.5e-29 133.3 124 59.7
HPP92_013368 Vanilla planifolia HOM05D004897 ORTHO05D005928 2.0e-29 132.9 145 55.9
MD06G1230800 Malus domestica HOM05D004897 ORTHO05D005928 2.6e-29 132.5 145 51.7
QL10p028331 Quercus lobata HOM05D004897 ORTHO05D005928 2.6e-29 132.5 145 53.1
THA.LOC104812165 Tarenaya hassleriana HOM05D004897 ORTHO05D005928 2.6e-29 132.5 124 62.1
QL10p028216 Quercus lobata HOM05D004897 ORTHO05D005928 3.4e-29 132.1 145 53.1
MBI12_g30398_MAGBIO Magnolia biondii HOM05D004897 ORTHO05D005928 4.5e-29 131.7 128 59.4
Dinv18253 Davidia involucrata HOM05D004897 ORTHO05D005928 1.3e-28 130.2 144 53.5
Glyma.05G244800 Glycine max HOM05D004897 ORTHO05D005928 1.3e-28 130.2 145 53.8
Actinidia35124 Actinidia chinensis HOM05D004897 ORTHO05D005928 1.7e-28 129.8 119 59.7
CiPaw.15G140900 Carya illinoinensis HOM05D004897 ORTHO05D005928 1.7e-28 129.8 145 51.0
ATR1102G065 Amborella trichopoda HOM05D004897 ORTHO05D005928 2.2e-28 129.4 111 67.6
Dinv10174 Davidia involucrata HOM05D004897 ORTHO05D005928 2.2e-28 129.4 145 52.4
MD14G1235400 Malus domestica HOM05D004897 ORTHO05D005928 2.2e-28 129.4 145 50.3
Potri.015G039800 Populus trichocarpa HOM05D004897 ORTHO05D005928 2.2e-28 129.4 145 51.7
Prupe.5G232100 Prunus persica HOM05D004897 ORTHO05D005928 2.2e-28 129.4 140 54.3
Sc10g0009320 Simmondsia chinensis HOM05D004897 ORTHO05D005928 2.2e-28 129.4 145 51.0
Actinidia18901 Actinidia chinensis HOM05D004897 ORTHO05D005928 5.0e-28 128.3 119 58.0
Aqoxy3G00106 Aquilegia oxysepala HOM05D004897 ORTHO05D005928 5.0e-28 128.3 145 50.3
Glyma.08G053300 Glycine max HOM05D004897 ORTHO05D005928 8.5e-28 127.5 144 52.1
VMungo0251G1788 Vigna mungo HOM05D004897 ORTHO05D005928 8.5e-28 127.5 126 57.1
Lalb_Chr05g0221751 Lupinus albus HOM05D004897 ORTHO05D005928 1.1e-27 127.1 144 52.8
RcHm_v2.0_Chr7g0178571 Rosa chinensis HOM05D004897 ORTHO05D005928 1.9e-27 126.3 145 50.3
FvH4_5g17221 Fragaria vesca HOM05D004897 ORTHO05D005928 3.2e-27 125.6 145 51.0
Phvul.002G329100 Phaseolus vulgaris HOM05D004897 ORTHO05D005928 3.2e-27 125.6 126 54.8
Hund02326 Selenicereus undatus HOM05D004897 ORTHO05D005928 3.2e-27 125.6 145 51.0
Hma1.2p1_0669F.1_g200180 Hydrangea macrophylla HOM05D004897 ORTHO05D005928 4.2e-27 125.2 145 49.7
Lalb_Chr16g0387081 Lupinus albus HOM05D004897 ORTHO05D005928 4.2e-27 125.2 126 57.9
SGA_v2.0_scaffold168G38498 Striga asiatica HOM05D004897 ORTHO05D005928 4.2e-27 125.2 128 54.7
FAN13G1819 Fragaria x ananassa HOM05D004897 ORTHO05D005928 5.5e-27 124.8 145 50.3
TWI60G0918 Tripterygium wilfordii HOM05D004897 ORTHO05D005928 5.5e-27 124.8 145 51.7
FAN18G0124 Fragaria x ananassa HOM05D004897 ORTHO05D005928 7.2e-27 124.4 140 52.9
Nitab4.5_0006894g0040 Nicotiana tabacum HOM05D004897 ORTHO05D005928 7.2e-27 124.4 145 49.7
A06p14220 Brassica napus HOM05D004897 ORTHO05D005928 9.4e-27 124.0 126 59.5
BraA06t24553Z Brassica rapa HOM05D004897 ORTHO05D005928 9.4e-27 124.0 126 59.5
Gohir.A12G268700 Gossypium hirsutum HOM05D004897 ORTHO05D005928 9.4e-27 124.0 145 49.7
Thhalv10007004m.g Eutrema salsugineum HOM05D004897 ORTHO05D005928 1.2e-26 123.6 145 53.1
FAN04G2242 Fragaria x ananassa HOM05D004897 ORTHO05D005928 1.6e-26 123.2 145 50.3
Aa31LG7G2880 Aethionema arabicum HOM05D004897 ORTHO05D005928 2.1e-26 122.9 145 51.0
C05p16500 Brassica napus HOM05D004897 ORTHO05D005928 2.7e-26 122.5 149 52.3
ECA233G2541 Erigeron canadensis HOM05D004897 ORTHO05D005928 2.7e-26 122.5 145 51.7
Migut.D01558 Erythranthe guttata HOM05D004897 ORTHO05D005928 2.7e-26 122.5 145 49.0
Cc04_g06380 Coffea canephora HOM05D004897 ORTHO05D005928 3.6e-26 122.1 145 50.3
Medtr8g107060 Medicago truncatula HOM05D004897 ORTHO05D005928 3.6e-26 122.1 126 54.8
Sp1g16170 Schrenkiella parvula HOM05D004897 ORTHO05D005928 3.6e-26 122.1 145 52.4
Duzib084G0246 Durio zibethinus HOM05D004897 ORTHO05D005928 4.7e-26 121.7 119 57.1
FAN08G3076 Fragaria x ananassa HOM05D004897 ORTHO05D005928 4.7e-26 121.7 145 50.3
HanXRQChr08g0227441 Helianthus annuus HOM05D004897 ORTHO05D005928 4.7e-26 121.7 145 49.7
TWI81G0456 Tripterygium wilfordii HOM05D004897 ORTHO05D005928 4.7e-26 121.7 145 50.3
BcaB07g31825 Brassica carinata HOM05D004897 ORTHO05D005928 7.9e-26 120.9 149 51.7
BcaC05g25714 Brassica carinata HOM05D004897 ORTHO05D005928 7.9e-26 120.9 149 51.7
BolC5t30347H Brassica oleracea HOM05D004897 ORTHO05D005928 7.9e-26 120.9 149 51.7
Cpa.g.sc3.408 Carica papaya HOM05D004897 ORTHO05D005928 7.9e-26 120.9 145 48.3
Nitab4.5_0001456g0120 Nicotiana tabacum HOM05D004897 ORTHO05D005928 7.9e-26 120.9 145 49.7
Ah.11g045250 Amaranthus hybridus HOM05D004897 ORTHO05D005928 1.8e-25 119.8 145 48.3
MSTRG.4571 Avicennia marina HOM05D004897 ORTHO05D005928 1.8e-25 119.8 145 50.3
Oeu014377.2 Olea europaea HOM05D004897 ORTHO05D005928 1.8e-25 119.8 123 52.8
Gorai.008G289400 Gossypium raimondii HOM05D004897 ORTHO05D005928 3.0e-25 119.0 145 47.6
SalBow1G4576 Salvia bowleyana HOM05D004897 ORTHO05D005928 3.0e-25 119.0 119 56.3
Rhsim12G0138900 Rhododendron simsii HOM05D004897 ORTHO05D005928 3.9e-25 118.6 104 61.5
Gohir.D12G269100 Gossypium hirsutum HOM05D004897 ORTHO05D005928 5.1e-25 118.2 145 47.6
Lj4g0010445 Lotus japonicus HOM05D004897 ORTHO05D005928 6.7e-25 117.9 127 53.5
Thecc.03G053700 Theobroma cacao HOM05D004897 ORTHO05D005928 6.7e-25 117.9 145 49.0
Ciclev10007731m.g Citrus clementina HOM05D004897 ORTHO05D005928 8.8e-25 117.5 124 54.8
CsaV3_1G004270 Cucumis sativus L. HOM05D004897 ORTHO05D005928 8.8e-25 117.5 131 51.9
Psat7g002120 Pisum sativum HOM05D004897 ORTHO05D005928 8.8e-25 117.5 126 52.4
AL1G30560 Arabidopsis lyrata HOM05D004897 ORTHO05D005928 1.1e-24 117.1 121 57.0
A08p30510 Brassica napus HOM05D004897 ORTHO05D005928 1.1e-24 117.1 122 56.6
Carub.0001s1783 Capsella rubella HOM05D004897 ORTHO05D005928 1.5e-24 116.7 116 58.6
Lsat_1_v5_gn_8_144040 Lactuca sativa HOM05D004897 ORTHO05D005928 2.0e-24 116.3 145 49.0
AT1G18190 Arabidopsis thaliana HOM05D004897 ORTHO05D005928 3.3e-24 115.5 145 49.7
TPR.G1406 Trifolium pratense HOM05D004897 ORTHO05D005928 5.7e-24 114.8 124 53.2
Gohir.A09G175700 Gossypium hirsutum HOM05D004897 ORTHO05D005928 7.4e-24 114.4 118 55.1
vmacro16414 Vaccinium macrocarpon HOM05D004897 ORTHO05D005928 9.7e-24 114.0 141 49.6
ClCG06G014390 Citrullus lanatus HOM05D004897 ORTHO05D005928 3.7e-23 112.1 131 50.4
BcaC07g38902 Brassica carinata HOM05D004897 ORTHO05D005928 2.4e-22 109.4 114 56.1
Manes.14G170400 Manihot esculenta HOM05D004897 ORTHO05D005928 5.3e-22 108.2 124 50.8
BraA08t34983Z Brassica rapa HOM05D004897 ORTHO05D005928 9.1e-22 107.5 116 54.3
C08p18450 Brassica napus HOM05D004897 ORTHO05D005928 1.5e-21 106.7 116 53.4
AUR62042935 Chenopodium quinoa HOM05D004897 ORTHO05D005928 2.6e-21 105.9 146 45.2
arahy.Tifrunner.gnm1.ann1.Y8NJDB Arachis hypogaea HOM05D004897 ORTHO05D005928 4.5e-21 105.1 126 49.2
arahy.Tifrunner.gnm1.ann1.QTT902 Arachis hypogaea HOM05D004897 ORTHO05D005928 7.7e-21 104.4 126 48.4
COL.COLO4_16135 Corchorus olitorius HOM05D004897 ORTHO05D005928 7.7e-21 104.4 137 49.6
CARHR018770 Cardamine hirsuta HOM05D004897 ORTHO05D005928 1.1e-19 100.5 94 62.8
Haze_18817 Corylus avellana HOM05D004897 ORTHO05D005928 2.5e-19 99.4 89 57.3
Peaxi162Scf00683g00441 Petunia axillaris HOM05D004897 ORTHO05D005928 9.4e-19 97.4 102 50.0
Pp3c2_5550 Physcomitrium patens HOM05D004897 ORTHO05D005928 2.3e-17 92.8 141 45.4
Ca_17200_v3 Cicer arietinum L. HOM05D004897 ORTHO05D005928 8.8e-17 90.9 126 44.4
Sed0018128 Sechium edule HOM05D004897 ORTHO05D005928 8.8e-17 90.9 130 43.8
CDE05G0958 Ceratophyllum demersum HOM05D004897 ORTHO05D005928 1.3e-15 87.0 77 64.9
Atru.chr9.1748 Acer truncatum HOM05D004897 ORTHO05D005928 6.3e-15 84.7 144 38.9
MELO3C017351.2 Cucumis melo HOM05D004897 ORTHO05D005928 2.4e-14 82.8 131 42.0
Oeu041185.1 Olea europaea HOM05D004897 ORTHO05D005928 3.1e-14 82.4 94 53.2
PGR083G0946 Punica granatum HOM05D004897 ORTHO05D005928 9.1e-14 80.9 145 36.6
Sed0002019 Sechium edule HOM05D004897 ORTHO05D005928 3.5e-13 79.0 130 41.5
Mapoly0056s0112 Marchantia polymorpha HOM05D004897 ORTHO05D005928 4.5e-13 78.6 104 48.1
AagrBONN_evm.TU.Sc2ySwM_344.4779 Anthoceros agrestis HOM05D004897 ORTHO05D005928 7.7e-13 77.8 121 40.5
BcaNung05436 Brassica carinata HOM05D004897 ORTHO05D005928 1.1e-11 73.9 96 47.9
AUR62041008 Chenopodium quinoa HOM05D004897 ORTHO05D005928 1.9e-11 73.2 73 57.5
arahy.Tifrunner.gnm1.ann1.U711QF Arachis hypogaea HOM05D004897 ORTHO05D005928 7.5e-08 61.2 82 48.8
Zm00001eb345920 Zea mays HOM05D003167 ORTHO05D023710 1.3e-07 60.5 47 76.6
Prupe.5G050900 Prunus persica HOM05D004897 ORTHO05D005928 2.4e-06 56.2 43 62.8
SEGI_22595 Sequoiadendron giganteum HOM05D004897 ORTHO05D005928 5.3e-06 55.1 117 39.3


User provided reference genes

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