Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb072300 Zea mays HOM05D008311 ORTHO05D010526 3.9e-131 471.5 237 100.0
Zm00001eb429910 Zea mays HOM05D008311 ORTHO05D010526 1.0e-70 270.8 267 60.7
Zm00001eb106730 Zea mays HOM05D006823 ORTHO05D008608 2.9e-54 216.1 122 91.8
Os04g0592500 Oryza sativa ssp. japonica HOM05D008311 ORTHO05D010526 3.7e-49 199.1 187 60.4
Aqoxy4G02584 Aquilegia oxysepala HOM05D008311 ORTHO05D010526 1.6e-39 167.2 190 50.5
GSVIVG01024350001 Vitis vinifera HOM05D008311 ORTHO05D010526 6.0e-39 165.2 151 58.9
TAR629G0038 Trochodendron aralioides HOM05D008311 ORTHO05D010526 1.1e-37 161.0 195 48.2
Nn3g20131 Nelumbo nucifera HOM05D008311 ORTHO05D010526 7.3e-37 158.3 151 54.3
Dinv29140 Davidia involucrata HOM05D008311 ORTHO05D010526 1.2e-36 157.5 193 48.7
Ciclev10020460m.g Citrus clementina HOM05D008311 ORTHO05D010526 2.8e-36 156.4 150 53.3
Zm00001eb201380 Zea mays HOM05D008311 ORTHO05D010526 4.7e-36 155.6 200 51.0
Thecc.05G218800 Theobroma cacao HOM05D008311 ORTHO05D010526 6.2e-36 155.2 151 55.0
QL09p022981 Quercus lobata HOM05D008311 ORTHO05D010526 8.0e-36 154.8 193 48.7
CiPaw.05G215000 Carya illinoinensis HOM05D008311 ORTHO05D010526 1.4e-35 154.1 194 49.5
MBI04_g20345_MAGBIO Magnolia biondii HOM05D008311 ORTHO05D010526 1.8e-35 153.7 265 37.0
Cfa016060 Carpinus fangiana HOM05D008311 ORTHO05D010526 3.1e-35 152.9 254 40.9
Manes.09G128000 Manihot esculenta HOM05D008311 ORTHO05D010526 4.0e-35 152.5 195 48.7
Duzib128G1797 Durio zibethinus HOM05D008311 ORTHO05D010526 6.8e-35 151.8 146 56.8
ATR0665G332 Amborella trichopoda HOM05D008311 ORTHO05D010526 4.4e-34 149.1 151 52.3
CDE11G1017 Ceratophyllum demersum HOM05D008311 ORTHO05D010526 4.4e-34 149.1 152 54.6
COL.COLO4_15199 Corchorus olitorius HOM05D008311 ORTHO05D010526 1.7e-33 147.1 151 53.0
Atru.chr12.1923 Acer truncatum HOM05D008311 ORTHO05D010526 1.1e-32 144.4 153 51.0
CDE11G1038 Ceratophyllum demersum HOM05D008311 ORTHO05D010526 1.4e-32 144.1 162 47.5
Gohir.D08G241300 Gossypium hirsutum HOM05D008311 ORTHO05D010526 1.4e-32 144.1 151 55.0
Gorai.004G256700 Gossypium raimondii HOM05D008311 ORTHO05D010526 1.4e-32 144.1 151 55.0
Gohir.A08G221662 Gossypium hirsutum HOM05D008311 ORTHO05D010526 1.9e-32 143.7 151 54.3
Actinidia08755 Actinidia chinensis HOM05D008311 ORTHO05D010526 5.4e-32 142.1 219 42.9
Sed0001927 Sechium edule HOM05D008311 ORTHO05D010526 7.1e-32 141.7 194 44.8
HPP92_005385 Vanilla planifolia HOM05D008311 ORTHO05D010526 4.6e-31 139.0 255 34.5
Eucgr.A02984 Eucalyptus grandis HOM05D008311 ORTHO05D010526 7.8e-31 138.3 173 50.3
AUR62028199 Chenopodium quinoa HOM05D008311 ORTHO05D010526 1.7e-30 137.1 146 53.4
vmacro06529 Vaccinium macrocarpon HOM05D008311 ORTHO05D010526 6.6e-30 135.2 179 43.6
AUR62002082 Chenopodium quinoa HOM05D008311 ORTHO05D010526 1.9e-29 133.7 146 53.4
HPP92_009011 Vanilla planifolia HOM05D008311 ORTHO05D010526 6.2e-28 128.6 258 34.9
CsaV3_2G036620 Cucumis sativus L. HOM05D008311 ORTHO05D010526 1.8e-27 127.1 150 48.7
Lsat_1_v5_gn_8_108920 Lactuca sativa HOM05D008311 ORTHO05D010526 1.5e-26 124.0 155 46.5
Haze_00388 Corylus avellana HOM05D008311 ORTHO05D010526 2.0e-26 123.6 176 43.2
FAN10G1178 Fragaria x ananassa HOM05D008311 ORTHO05D010526 1.7e-25 120.6 173 42.2
THA.LOC104821739 Tarenaya hassleriana HOM05D008311 ORTHO05D010526 2.2e-25 120.2 179 44.7
ClCG09G017160 Citrullus lanatus HOM05D008311 ORTHO05D010526 6.4e-25 118.6 156 44.2
MD07G1310100 Malus domestica HOM05D008311 ORTHO05D010526 1.1e-24 117.9 184 44.6
Prupe.2G328000 Prunus persica HOM05D008311 ORTHO05D010526 1.1e-24 117.9 179 44.7
EL10Ac3g05056 Beta vulgaris HOM05D008311 ORTHO05D010526 1.4e-24 117.5 221 38.5
SEGI_12661 Sequoiadendron giganteum HOM05D008311 ORTHO05D010526 1.4e-24 117.5 156 44.2
DCAR_020420 Daucus carota HOM05D008311 ORTHO05D010526 4.7e-20 102.4 148 42.6
Zm00001eb341760 Zea mays HOM05D008311 ORTHO05D010526 8.9e-19 98.2 138 47.1
Pp3c16_5410 Physcomitrium patens HOM05D008311 ORTHO05D010526 2.2e-17 93.6 205 33.7
Lj3A885T48 Lonicera japonica HOM05D008311 ORTHO05D010526 3.2e-16 89.7 202 36.6
Zm00001eb242960 Zea mays HOM05D001315 ORTHO05D001618 7.1e-16 88.6 59 81.4
Zm00001eb304200 Zea mays HOM05D001315 ORTHO05D001618 7.1e-16 88.6 59 81.4
Zm00001eb347210 Zea mays HOM05D001315 ORTHO05D001618 8.7e-14 81.6 49 87.8
RcHm_v2.0_Chr1g0384481 Rosa chinensis HOM05D008311 ORTHO05D010526 1.6e-12 77.4 105 42.9
AagrBONN_evm.TU.Sc2ySwM_117.4008 Anthoceros agrestis HOM05D008311 ORTHO05D010526 5.3e-11 72.4 137 35.8
Zm00001eb231300 Zea mays HOM05D008311 ORTHO05D446763 1.3e-09 67.8 42 76.2
FAN03G2372 Fragaria x ananassa HOM05D008311 ORTHO05D010526 4.2e-08 62.8 169 30.8


User provided reference genes

Program Settings