Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb071460 Zea mays HOM05D005029 ORTHO05D006052 2.3e-134 482.3 249 100.0
Zm00001eb430500 Zea mays HOM05D005029 ORTHO05D006052 1.3e-121 439.9 249 91.2
Os04g0606800 Oryza sativa ssp. japonica HOM05D005029 ORTHO05D006052 3.3e-88 328.9 237 76.4
PSO063G5693 Papaver somniferum HOM05D005029 ORTHO05D006052 1.1e-48 197.6 247 51.0
PSO170G2568 Papaver somniferum HOM05D005029 ORTHO05D006052 1.4e-46 190.7 247 49.8
Aqoxy7G02787 Aquilegia oxysepala HOM05D005029 ORTHO05D006052 1.7e-44 183.7 244 47.1
Dinv41171 Davidia involucrata HOM05D005029 ORTHO05D006052 2.9e-44 183.0 265 48.3
Nn7g36649 Nelumbo nucifera HOM05D005029 ORTHO05D006052 1.1e-43 181.0 257 46.3
HPP92_004703 Vanilla planifolia HOM05D005029 ORTHO05D006052 1.9e-43 180.3 230 50.9
Hund26310 Selenicereus undatus HOM05D005029 ORTHO05D006052 3.2e-43 179.5 260 45.8
TAR383G0036 Trochodendron aralioides HOM05D005029 ORTHO05D006052 5.5e-43 178.7 256 46.9
MBI19_g21652_MAGBIO Magnolia biondii HOM05D005029 ORTHO05D006052 7.1e-43 178.3 243 48.1
TAR626G1810 Trochodendron aralioides HOM05D005029 ORTHO05D006052 7.1e-43 178.3 256 46.9
CiPaw.08G032800 Carya illinoinensis HOM05D005029 ORTHO05D006052 1.6e-42 177.2 259 47.9
Gohir.A13G208700 Gossypium hirsutum HOM05D005029 ORTHO05D006052 1.6e-42 177.2 253 48.2
Gohir.D13G213100 Gossypium hirsutum HOM05D005029 ORTHO05D006052 3.5e-42 176.0 249 47.4
Gorai.013G243400 Gossypium raimondii HOM05D005029 ORTHO05D006052 3.5e-42 176.0 249 47.4
SGA_v2.0_scaffold31G12759 Striga asiatica HOM05D005029 ORTHO05D006052 3.5e-42 176.0 255 46.3
Cpa.g.c27842.2 Carica papaya HOM05D005029 ORTHO05D006052 1.8e-41 173.7 266 47.0
DCAR_030818 Daucus carota HOM05D005029 ORTHO05D006052 6.7e-41 171.8 264 45.5
COL.COLO4_08419 Corchorus olitorius HOM05D005029 ORTHO05D006052 1.5e-40 170.6 249 47.4
Medtr2g037940 Medicago truncatula HOM05D005029 ORTHO05D006052 1.9e-40 170.2 248 48.8
Cfa013448 Carpinus fangiana HOM05D005029 ORTHO05D006052 2.5e-40 169.9 264 47.0
MBI13_g01742_MAGBIO Magnolia biondii HOM05D005029 ORTHO05D006052 2.5e-40 169.9 249 47.8
ATR0626G110 Amborella trichopoda HOM05D005029 ORTHO05D006052 3.3e-40 169.5 251 44.2
HanXRQChr13g0426591 Helianthus annuus HOM05D005029 ORTHO05D006052 3.3e-40 169.5 258 45.3
Thhalv10025919m.g Eutrema salsugineum HOM05D005029 ORTHO05D006052 4.3e-40 169.1 257 45.5
Ca_02102_v3 Cicer arietinum L. HOM05D005029 ORTHO05D006052 5.7e-40 168.7 233 49.8
Haze_22015 Corylus avellana HOM05D005029 ORTHO05D006052 5.7e-40 168.7 261 46.7
Psat1g145480 Pisum sativum HOM05D005029 ORTHO05D006052 5.7e-40 168.7 246 47.2
CANSAT11G1104 Cannabis sativa HOM05D005029 ORTHO05D006052 9.7e-40 167.9 271 46.5
Carub.0007s1068 Capsella rubella HOM05D005029 ORTHO05D006052 9.7e-40 167.9 257 44.4
AUR62033261 Chenopodium quinoa HOM05D005029 ORTHO05D006052 1.6e-39 167.2 259 44.0
Actinidia01279 Actinidia chinensis HOM05D005029 ORTHO05D006052 2.2e-39 166.8 271 43.5
Phvul.009G236500 Phaseolus vulgaris HOM05D005029 ORTHO05D006052 2.2e-39 166.8 248 45.6
VMungo1309G1415 Vigna mungo HOM05D005029 ORTHO05D006052 2.2e-39 166.8 252 44.4
AUR62021347 Chenopodium quinoa HOM05D005029 ORTHO05D006052 3.7e-39 166.0 257 44.0
Cc00_g10760 Coffea canephora HOM05D005029 ORTHO05D006052 6.3e-39 165.2 258 44.6
Lj6g0016757 Lotus japonicus HOM05D005029 ORTHO05D006052 6.3e-39 165.2 251 46.2
Glyma.15G165600 Glycine max HOM05D005029 ORTHO05D006052 8.2e-39 164.9 252 46.0
MSTRG.26542 Avicennia marina HOM05D005029 ORTHO05D006052 1.4e-38 164.1 264 42.8
Lsat_1_v5_gn_3_137280 Lactuca sativa HOM05D005029 ORTHO05D006052 1.8e-38 163.7 253 47.0
Sp7g27770 Schrenkiella parvula HOM05D005029 ORTHO05D006052 1.8e-38 163.7 248 45.2
Aa31LG2G20590 Aethionema arabicum HOM05D005029 ORTHO05D006052 2.4e-38 163.3 254 42.9
AL7G22280 Arabidopsis lyrata HOM05D005029 ORTHO05D006052 3.1e-38 162.9 259 45.2
Migut.L01885 Erythranthe guttata HOM05D005029 ORTHO05D006052 4.1e-38 162.5 265 44.2
BolC3t21207H Brassica oleracea HOM05D005029 ORTHO05D006052 6.9e-38 161.8 251 45.4
Thecc.09G185600 Theobroma cacao HOM05D005029 ORTHO05D006052 6.9e-38 161.8 255 45.1
Glyma.09G059300 Glycine max HOM05D005029 ORTHO05D006052 9.0e-38 161.4 249 45.0
Manes.06G020200 Manihot esculenta HOM05D005029 ORTHO05D006052 9.0e-38 161.4 253 45.1
CiPaw.07G196600 Carya illinoinensis HOM05D005029 ORTHO05D006052 1.2e-37 161.0 249 45.0
TWI34G0612 Tripterygium wilfordii HOM05D005029 ORTHO05D006052 1.2e-37 161.0 251 45.0
Duzib170G0048 Durio zibethinus HOM05D005029 ORTHO05D006052 1.5e-37 160.6 253 45.5
Potri.006G075900 Populus trichocarpa HOM05D005029 ORTHO05D006052 2.0e-37 160.2 262 44.3
TWI32G0396 Tripterygium wilfordii HOM05D005029 ORTHO05D006052 2.0e-37 160.2 256 47.7
CARHR237880 Cardamine hirsuta HOM05D005029 ORTHO05D006052 2.6e-37 159.8 256 45.3
Eucgr.C00120 Eucalyptus grandis HOM05D005029 ORTHO05D006052 3.4e-37 159.5 263 42.2
Nitab4.5_0000617g0020 Nicotiana tabacum HOM05D005029 ORTHO05D006052 4.5e-37 159.1 255 45.9
EL10Ac8g18332 Beta vulgaris HOM05D005029 ORTHO05D006052 1.0e-36 157.9 257 42.8
MD16G1249500 Malus domestica HOM05D005029 ORTHO05D006052 1.0e-36 157.9 272 41.5
Nitab4.5_0008862g0020 Nicotiana tabacum HOM05D005029 ORTHO05D006052 1.0e-36 157.9 258 41.1
Ah.09g230060 Amaranthus hybridus HOM05D005029 ORTHO05D006052 1.3e-36 157.5 267 40.1
Oeu034799.1 Olea europaea HOM05D005029 ORTHO05D006052 1.3e-36 157.5 254 43.3
THA.LOC104814654 Tarenaya hassleriana HOM05D005029 ORTHO05D006052 1.3e-36 157.5 266 43.2
AT4G29960 Arabidopsis thaliana HOM05D005029 ORTHO05D006052 2.2e-36 156.8 260 44.6
FAN07G2409 Fragaria x ananassa HOM05D005029 ORTHO05D006052 2.2e-36 156.8 252 42.1
THA.LOC104803957 Tarenaya hassleriana HOM05D005029 ORTHO05D006052 5.0e-36 155.6 262 45.0
THA.LOC104803983 Tarenaya hassleriana HOM05D005029 ORTHO05D006052 5.0e-36 155.6 262 45.0
Duzib150G1033 Durio zibethinus HOM05D005029 ORTHO05D006052 6.5e-36 155.2 253 45.1
Nn2g14879 Nelumbo nucifera HOM05D005029 ORTHO05D006052 1.1e-35 154.5 257 44.0
Peaxi162Scf01600g00016 Petunia axillaris HOM05D005029 ORTHO05D006052 1.1e-35 154.5 256 42.6
unitig_699.g19404 Utricularia gibba HOM05D005029 ORTHO05D006052 1.1e-35 154.5 254 42.1
TPR.G7936 Trifolium pratense HOM05D005029 ORTHO05D006052 1.9e-35 153.7 232 47.0
BcaNung00506 Brassica carinata HOM05D005029 ORTHO05D006052 2.5e-35 153.3 248 44.0
RcHm_v2.0_Chr4g0399711 Rosa chinensis HOM05D005029 ORTHO05D006052 4.2e-35 152.5 259 41.3
BcaC01g01206 Brassica carinata HOM05D005029 ORTHO05D006052 7.2e-35 151.8 251 43.8
Potri.018G143000 Populus trichocarpa HOM05D005029 ORTHO05D006052 7.2e-35 151.8 247 43.3
Prupe.1G076300 Prunus persica HOM05D005029 ORTHO05D006052 2.1e-34 150.2 272 40.4
Sabra18G0116800 Salix brachista HOM05D005029 ORTHO05D006052 2.7e-34 149.8 259 42.5
Lalb_Chr11g0074801 Lupinus albus HOM05D005029 ORTHO05D006052 1.4e-33 147.5 255 43.9
BcaC09g51777 Brassica carinata HOM05D000106 ORTHO05D000160 2.3e-33 146.7 252 42.5
SHI09006 Sapria himalayana HOM05D005029 ORTHO05D006052 2.3e-33 146.7 251 39.0
CDE04G3679 Ceratophyllum demersum HOM05D005029 ORTHO05D006052 3.0e-33 146.4 252 43.3
BraA08t33909Z Brassica rapa HOM05D005029 ORTHO05D006052 3.9e-33 146.0 228 44.3
FvH4_4g07340 Fragaria vesca HOM05D005029 ORTHO05D006052 3.9e-33 146.0 264 39.4
FAN12G1304 Fragaria x ananassa HOM05D005029 ORTHO05D006052 3.9e-33 146.0 264 39.4
Sopen07g004720 Solanum pennellii HOM05D005029 ORTHO05D006052 3.9e-33 146.0 258 42.6
Ciclev10009010m.g Citrus clementina HOM05D005029 ORTHO05D006052 6.7e-33 145.2 250 41.6
Solyc07g008780.3 Solanum lycopersicum HOM05D005029 ORTHO05D006052 6.7e-33 145.2 258 42.2
unitig_27.g24759 Utricularia gibba HOM05D005029 ORTHO05D006052 6.7e-33 145.2 253 39.9
Ah.14g083530 Amaranthus hybridus HOM05D005029 ORTHO05D006052 8.8e-33 144.8 260 41.2
Dinv25437 Davidia involucrata HOM05D005029 ORTHO05D006052 1.5e-32 144.1 228 44.7
CsaV3_1G031840 Cucumis sativus L. HOM05D005029 ORTHO05D006052 1.9e-32 143.7 263 43.3
PGSC0003DMG400028729 Solanum tuberosum HOM05D005029 ORTHO05D006052 5.7e-32 142.1 277 41.9
ECA240G3783 Erigeron canadensis HOM05D005029 ORTHO05D006052 9.7e-32 141.4 230 45.2
Atru.chr7.763 Acer truncatum HOM05D005029 ORTHO05D006052 1.3e-31 141.0 255 42.4
Atru.chr7.783 Acer truncatum HOM05D005029 ORTHO05D006052 1.3e-31 141.0 255 42.4
arahy.Tifrunner.gnm1.ann1.K38ATV Arachis hypogaea HOM05D005029 ORTHO05D006052 1.3e-31 141.0 258 41.9
Sabra06G0056600 Salix brachista HOM05D005029 ORTHO05D006052 1.3e-31 141.0 292 39.7
BraA01t00761Z Brassica rapa HOM05D005029 ORTHO05D006052 1.7e-31 140.6 246 41.9
FAN22G0020 Fragaria x ananassa HOM05D005029 ORTHO05D006052 2.2e-31 140.2 261 38.3
GSVIVG01010867001 Vitis vinifera HOM05D005029 ORTHO05D006052 2.8e-31 139.8 262 41.2
FAN17G0071 Fragaria x ananassa HOM05D005029 ORTHO05D006052 4.8e-31 139.0 271 37.6
A08p19470 Brassica napus HOM05D005029 ORTHO05D006052 6.3e-31 138.7 252 39.7
Sc16g0010440 Simmondsia chinensis HOM05D005029 ORTHO05D006052 8.2e-31 138.3 261 40.2
Sed0026503 Sechium edule HOM05D005029 ORTHO05D006052 4.1e-30 136.0 267 41.6
QL02p046501 Quercus lobata HOM05D005029 ORTHO05D006052 5.3e-30 135.6 168 51.8
C01p09110 Brassica napus HOM05D005029 ORTHO05D006052 2.6e-29 133.3 246 41.9
BolC1t00902H Brassica oleracea HOM05D005029 ORTHO05D006052 2.6e-29 133.3 246 41.9
SEGI_23735 Sequoiadendron giganteum HOM05D005029 ORTHO05D006052 4.5e-29 132.5 281 36.7
MELO3C017433.2 Cucumis melo HOM05D005029 ORTHO05D006052 5.9e-29 132.1 272 41.9
CDE02G0552 Ceratophyllum demersum HOM05D005029 ORTHO05D006052 7.7e-29 131.7 251 41.0
A01p08140 Brassica napus HOM05D005029 ORTHO05D006052 1.7e-28 130.6 257 40.5
arahy.Tifrunner.gnm1.ann1.J7B49U Arachis hypogaea HOM05D005029 ORTHO05D006052 2.9e-28 129.8 165 51.5
C03p88970 Brassica napus HOM05D005029 ORTHO05D006052 5.0e-28 129.0 250 38.4
BcaC09g51764 Brassica carinata HOM05D005029 ORTHO05D006052 6.5e-28 128.6 259 40.2
Lalb_Chr13g0300031 Lupinus albus HOM05D005029 ORTHO05D006052 1.9e-27 127.1 241 41.9
CSS0012939 Camellia sinensis var. sinensis HOM05D005029 ORTHO05D006052 2.5e-27 126.7 273 36.3
PGR142G1735 Punica granatum HOM05D005029 ORTHO05D006052 2.5e-27 126.7 210 45.2
Oeu044675.2 Olea europaea HOM05D005029 ORTHO05D006052 7.2e-27 125.2 294 36.4
BcaC07g37961 Brassica carinata HOM05D005029 ORTHO05D006052 1.2e-26 124.4 247 39.3
Zm00001eb386880 Zea mays HOM05D000234 ORTHO05D014456 1.0e-25 121.3 63 95.2
ClCG06G013560 Citrullus lanatus HOM05D005029 ORTHO05D006052 8.8e-25 118.2 271 39.1
C07p57380 Brassica napus HOM05D005029 ORTHO05D006052 1.5e-24 117.5 181 49.2
Mapoly0076s0086 Marchantia polymorpha HOM05D005029 ORTHO05D006052 5.7e-24 115.5 303 35.3
Migut.J00802 Erythranthe guttata HOM05D005029 ORTHO05D006052 1.1e-22 111.3 269 38.7
Lj5A672T26 Lonicera japonica HOM05D005029 ORTHO05D006052 9.1e-22 108.2 160 46.2
AagrBONN_evm.TU.Sc2ySwM_368.2110 Anthoceros agrestis HOM05D005029 ORTHO05D006052 2.2e-20 103.6 293 33.8
SMO358G0278 Selaginella moellendorffii HOM05D005029 ORTHO05D006052 1.9e-19 100.5 269 34.9
BcaB06g28011 Brassica carinata HOM05D005029 ORTHO05D006052 4.7e-18 95.9 97 52.6
Pp3c9_8340 Physcomitrium patens HOM05D005029 ORTHO05D006052 3.0e-17 93.2 184 40.8
Duzib168G1982 Durio zibethinus HOM05D005029 ORTHO05D006052 2.2e-15 87.0 153 41.8
BcaC05g25672 Brassica carinata HOM05D005029 ORTHO05D006052 4.0e-09 66.2 196 32.7
BcaB04g18770 Brassica carinata HOM05D005029 ORTHO05D006052 5.2e-09 65.9 80 53.8
Rhsim01G0118000 Rhododendron simsii HOM05D005029 ORTHO05D006052 4.4e-08 62.8 116 44.8
BolC6t39910H Brassica oleracea HOM05D005029 ORTHO05D006052 5.7e-08 62.4 81 44.4
CBR_g52634 Chara braunii HOM05D005029 ORTHO05D006052 1.4e-06 57.8 104 38.5


User provided reference genes

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