Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb070880 Zea mays HOM05D005441 ORTHO05D006879 4.6e-79 297.7 143 100.0
Zm00001eb311520 Zea mays HOM05D005441 ORTHO05D006879 2.9e-73 278.5 140 96.4
Zm00001eb141530 Zea mays HOM05D005441 ORTHO05D006879 8.0e-63 243.8 122 95.1
Os01g0941800 Oryza sativa ssp. japonica HOM05D005441 ORTHO05D006879 6.3e-44 181.0 123 73.2
Nn7g36437 Nelumbo nucifera HOM05D005441 ORTHO05D006879 1.2e-31 140.2 123 58.5
Gorai.006G134400 Gossypium raimondii HOM05D005441 ORTHO05D006879 4.7e-31 138.3 123 56.1
COL.COLO4_21308 Corchorus olitorius HOM05D005441 ORTHO05D006879 6.1e-31 137.9 123 56.9
Gohir.D09G116100 Gossypium hirsutum HOM05D005441 ORTHO05D006879 6.1e-31 137.9 123 56.1
HPP92_014156 Vanilla planifolia HOM05D005441 ORTHO05D006879 8.0e-31 137.5 124 54.8
HPP92_014176 Vanilla planifolia HOM05D005441 ORTHO05D006879 8.0e-31 137.5 124 54.8
AL3G21480 Arabidopsis lyrata HOM05D005441 ORTHO05D006879 1.0e-30 137.1 123 57.7
Gohir.A09G119900 Gossypium hirsutum HOM05D005441 ORTHO05D006879 5.2e-30 134.8 123 55.3
A05p38950 Brassica napus HOM05D005441 ORTHO05D006879 6.8e-30 134.4 124 58.9
TAR369G0103 Trochodendron aralioides HOM05D005441 ORTHO05D006879 6.8e-30 134.4 123 56.1
PSO832G1452 Papaver somniferum HOM05D005441 ORTHO05D006879 8.9e-30 134.0 123 52.8
MBI19_g22482_MAGBIO Magnolia biondii HOM05D005441 ORTHO05D006879 1.2e-29 133.7 123 56.9
THA.LOC104826947 Tarenaya hassleriana HOM05D005441 ORTHO05D006879 1.2e-29 133.7 124 54.8
Atru.chr1.1186 Acer truncatum HOM05D005441 ORTHO05D006879 1.5e-29 133.3 126 54.8
BraA05t22686Z Brassica rapa HOM05D005441 ORTHO05D006879 1.5e-29 133.3 124 58.1
PSO210G6175 Papaver somniferum HOM05D005441 ORTHO05D006879 1.5e-29 133.3 123 52.8
AT3G10150 Arabidopsis thaliana HOM05D005441 ORTHO05D006879 2.0e-29 132.9 123 56.9
Thecc.05G145600 Theobroma cacao HOM05D005441 ORTHO05D006879 2.0e-29 132.9 123 54.5
Duzib106G1775 Durio zibethinus HOM05D005441 ORTHO05D006879 2.6e-29 132.5 113 58.4
Lalb_Chr02g0156401 Lupinus albus HOM05D005441 ORTHO05D006879 2.6e-29 132.5 123 56.1
Hund19127 Selenicereus undatus HOM05D005441 ORTHO05D006879 2.6e-29 132.5 121 56.2
BcaNung05909 Brassica carinata HOM05D005441 ORTHO05D006879 3.4e-29 132.1 123 55.3
Prupe.7G050500 Prunus persica HOM05D005441 ORTHO05D006879 5.8e-29 131.3 123 55.3
GSVIVG01033549001 Vitis vinifera HOM05D005441 ORTHO05D006879 5.8e-29 131.3 124 55.6
Ciclev10007026m.g Citrus clementina HOM05D005441 ORTHO05D006879 7.5e-29 131.0 126 52.4
Lj3g0025341 Lotus japonicus HOM05D005441 ORTHO05D006879 9.8e-29 130.6 123 54.5
SEGI_23443 Sequoiadendron giganteum HOM05D005441 ORTHO05D006879 9.8e-29 130.6 117 53.8
SEGI_29185 Sequoiadendron giganteum HOM05D005441 ORTHO05D006879 9.8e-29 130.6 117 53.8
Thhalv10020902m.g Eutrema salsugineum HOM05D005441 ORTHO05D006879 1.3e-28 130.2 126 57.1
AUR62024526 Chenopodium quinoa HOM05D005441 ORTHO05D006879 1.7e-28 129.8 123 52.0
Ciclev10005135m.g Citrus clementina HOM05D005441 ORTHO05D006879 1.7e-28 129.8 124 53.2
Cfa016756 Carpinus fangiana HOM05D005441 ORTHO05D006879 2.2e-28 129.4 123 54.5
FvH4_6g24730 Fragaria vesca HOM05D005441 ORTHO05D006879 2.2e-28 129.4 110 59.1
Phvul.007G249800 Phaseolus vulgaris HOM05D005441 ORTHO05D006879 2.2e-28 129.4 123 53.7
PGR004G1247 Punica granatum HOM05D005441 ORTHO05D006879 2.2e-28 129.4 123 55.3
Sp3g08430 Schrenkiella parvula HOM05D005441 ORTHO05D006879 2.2e-28 129.4 124 56.5
VMungo0720G1530 Vigna mungo HOM05D005441 ORTHO05D006879 2.2e-28 129.4 123 52.0
EL10Ac3g07155 Beta vulgaris HOM05D005441 ORTHO05D006879 2.9e-28 129.0 123 52.8
BcaNung05908 Brassica carinata HOM05D005441 ORTHO05D006879 2.9e-28 129.0 123 55.3
BolC5t34452H Brassica oleracea HOM05D005441 ORTHO05D006879 2.9e-28 129.0 123 55.3
Eucgr.A02298 Eucalyptus grandis HOM05D005441 ORTHO05D006879 2.9e-28 129.0 123 52.8
QL05p004724 Quercus lobata HOM05D005441 ORTHO05D006879 2.9e-28 129.0 113 52.2
QL10p044609 Quercus lobata HOM05D005441 ORTHO05D006879 2.9e-28 129.0 113 52.2
Glyma.02G192200 Glycine max HOM05D005441 ORTHO05D006879 3.7e-28 128.6 123 54.5
MD12G1085300 Malus domestica HOM05D005441 ORTHO05D006879 3.7e-28 128.6 123 52.8
GSVIVG01033547001 Vitis vinifera HOM05D005441 ORTHO05D006879 3.7e-28 128.6 124 54.8
Aqoxy2G00259 Aquilegia oxysepala HOM05D005441 ORTHO05D006879 4.9e-28 128.3 123 55.3
Carub.0003s0930 Capsella rubella HOM05D005441 ORTHO05D006879 4.9e-28 128.3 123 55.3
AUR62026118 Chenopodium quinoa HOM05D005441 ORTHO05D006879 4.9e-28 128.3 113 54.0
HanXRQChr14g0444951 Helianthus annuus HOM05D005441 ORTHO05D006879 4.9e-28 128.3 123 53.7
RcHm_v2.0_Chr3g0484281 Rosa chinensis HOM05D005441 ORTHO05D006879 4.9e-28 128.3 123 53.7
CiPaw.09G041900 Carya illinoinensis HOM05D005441 ORTHO05D006879 8.3e-28 127.5 123 55.3
Potri.016G042500 Populus trichocarpa HOM05D005441 ORTHO05D006879 8.3e-28 127.5 123 52.0
QL07p005267 Quercus lobata HOM05D005441 ORTHO05D006879 8.3e-28 127.5 123 52.0
Eucgr.A02299 Eucalyptus grandis HOM05D005441 ORTHO05D006879 1.1e-27 127.1 123 52.0
Aa31LG3G2690 Aethionema arabicum HOM05D005441 ORTHO05D006879 1.4e-27 126.7 123 55.3
Ah.04g151360 Amaranthus hybridus HOM05D005441 ORTHO05D006879 1.4e-27 126.7 111 53.2
FAN05G4498 Fragaria x ananassa HOM05D005441 ORTHO05D006879 1.4e-27 126.7 110 58.2
Manes.08G054100 Manihot esculenta HOM05D005441 ORTHO05D006879 1.4e-27 126.7 123 54.5
SEGI_17185 Sequoiadendron giganteum HOM05D005441 ORTHO05D006879 1.4e-27 126.7 117 50.4
TPR.G13795 Trifolium pratense HOM05D005441 ORTHO05D006879 1.8e-27 126.3 123 52.8
QL07p005282 Quercus lobata HOM05D005441 ORTHO05D006879 2.4e-27 125.9 111 54.1
QL07p005564 Quercus lobata HOM05D005441 ORTHO05D006879 2.4e-27 125.9 111 54.1
Medtr1g051760 Medicago truncatula HOM05D005441 ORTHO05D006879 3.2e-27 125.6 123 53.7
MELO3C009811.2 Cucumis melo HOM05D005441 ORTHO05D006879 4.1e-27 125.2 123 50.4
Eucgr.A02300 Eucalyptus grandis HOM05D005441 ORTHO05D006879 4.1e-27 125.2 123 52.0
TWI53G1498 Tripterygium wilfordii HOM05D005441 ORTHO05D006879 4.1e-27 125.2 123 52.8
Rhsim03G0030800 Rhododendron simsii HOM05D005441 ORTHO05D006879 5.4e-27 124.8 124 52.4
Sed0017425 Sechium edule HOM05D005441 ORTHO05D006879 9.2e-27 124.0 123 49.6
arahy.Tifrunner.gnm1.ann1.L13VJ0 Arachis hypogaea HOM05D005441 ORTHO05D006879 1.2e-26 123.6 109 56.0
SalBow6G3742 Salvia bowleyana HOM05D005441 ORTHO05D006879 1.2e-26 123.6 124 50.0
CsaV3_3G040780 Cucumis sativus L. HOM05D005441 ORTHO05D006879 1.6e-26 123.2 123 49.6
arahy.Tifrunner.gnm1.ann1.I76ATH Arachis hypogaea HOM05D005441 ORTHO05D006879 2.0e-26 122.9 112 55.4
CSS0036594 Camellia sinensis var. sinensis HOM05D005441 ORTHO05D006879 6.0e-26 121.3 123 50.4
ClCG10G015640 Citrullus lanatus HOM05D005441 ORTHO05D006879 6.0e-26 121.3 123 49.6
QL05p004486 Quercus lobata HOM05D005441 ORTHO05D006879 6.0e-26 121.3 123 50.4
MD14G1080200 Malus domestica HOM05D005441 ORTHO05D006879 7.8e-26 120.9 126 50.8
Hund05910 Selenicereus undatus HOM05D005441 ORTHO05D006879 1.0e-25 120.6 123 50.4
C05p57970 Brassica napus HOM05D005441 ORTHO05D006879 1.3e-25 120.2 123 53.7
Ca_14293_v3 Cicer arietinum L. HOM05D005441 ORTHO05D006879 1.3e-25 120.2 123 51.2
Ca_30943_v3 Cicer arietinum L. HOM05D005441 ORTHO05D006879 1.3e-25 120.2 123 51.2
ATR0721G128 Amborella trichopoda HOM05D005441 ORTHO05D006879 1.7e-25 119.8 112 57.1
AUR62028834 Chenopodium quinoa HOM05D005441 ORTHO05D006879 3.0e-25 119.0 123 50.4
ECA238G2248 Erigeron canadensis HOM05D005441 ORTHO05D006879 5.0e-25 118.2 123 50.4
Lsat_1_v5_gn_2_65661 Lactuca sativa HOM05D005441 ORTHO05D006879 5.0e-25 118.2 124 51.6
Oeu006920.1 Olea europaea HOM05D005441 ORTHO05D006879 5.0e-25 118.2 123 51.2
Nitab4.5_0001618g0230 Nicotiana tabacum HOM05D005441 ORTHO05D006879 6.6e-25 117.9 121 48.8
Lj2A389T89 Lonicera japonica HOM05D005441 ORTHO05D006879 8.6e-25 117.5 123 52.0
vmacro21956 Vaccinium macrocarpon HOM05D005441 ORTHO05D006879 8.6e-25 117.5 123 49.6
Migut.J01709 Erythranthe guttata HOM05D005441 ORTHO05D006879 1.1e-24 117.1 123 48.8
Nitab4.5_0000826g0160 Nicotiana tabacum HOM05D005441 ORTHO05D006879 1.5e-24 116.7 121 48.8
Cc06_g18310 Coffea canephora HOM05D005441 ORTHO05D006879 2.5e-24 115.9 125 48.8
Ah.02g131420 Amaranthus hybridus HOM05D004931 ORTHO05D006579 3.3e-24 115.5 114 53.5
Sopen04g008570 Solanum pennellii HOM05D005441 ORTHO05D006879 3.3e-24 115.5 125 48.0
EL10Ac6g13153 Beta vulgaris HOM05D005441 ORTHO05D006879 5.6e-24 114.8 123 48.0
SMO147G0304 Selaginella moellendorffii HOM05D005441 ORTHO05D006879 9.5e-24 114.0 110 48.2
Psat6g118360 Pisum sativum HOM05D005441 ORTHO05D006879 1.6e-23 113.2 109 53.2
HanXRQChr14g0444961 Helianthus annuus HOM05D005441 ORTHO05D006879 2.1e-23 112.8 123 48.8
Solyc04g016490.4 Solanum lycopersicum HOM05D005441 ORTHO05D006879 2.8e-23 112.5 125 47.2
Cpa.g.sc120.4 Carica papaya HOM05D005441 ORTHO05D006879 3.6e-23 112.1 99 54.5
Mapoly0006s0192 Marchantia polymorpha HOM05D005441 ORTHO05D006879 3.6e-23 112.1 109 48.6
CAN.G1237.6 Capsicum annuum HOM05D005441 ORTHO05D006879 6.2e-23 111.3 125 46.4
Peaxi162Scf00130g00934 Petunia axillaris HOM05D005441 ORTHO05D006879 1.4e-22 110.2 125 47.2
PGSC0003DMG400012721 Solanum tuberosum HOM05D005441 ORTHO05D006879 1.4e-22 110.2 125 46.4
MSTRG.19833 Avicennia marina HOM05D005441 ORTHO05D006879 4.0e-22 108.6 121 49.6
Haze_19745 Corylus avellana HOM05D005441 ORTHO05D006879 8.9e-22 107.5 123 49.6
CiPaw.09G041500 Carya illinoinensis HOM05D005441 ORTHO05D006879 3.2e-19 99.0 105 49.5
FAN09G0607 Fragaria x ananassa HOM05D005441 ORTHO05D006879 8.6e-17 90.9 137 41.6
TPR.G29527 Trifolium pratense HOM05D005441 ORTHO05D006879 3.3e-16 89.0 67 59.7
QL05p004537 Quercus lobata HOM05D005441 ORTHO05D006879 7.3e-16 87.8 89 48.3
Sc19g0008470 Simmondsia chinensis HOM05D005441 ORTHO05D006879 1.2e-15 87.0 89 50.6
QL07p005518 Quercus lobata HOM05D005441 ORTHO05D006879 1.4e-14 83.6 122 40.2
Dinv39675 Davidia involucrata HOM05D005441 ORTHO05D006879 4.0e-14 82.0 80 52.5
CARHR084630 Cardamine hirsuta HOM05D005441 ORTHO05D006879 4.4e-13 78.6 82 50.0
Rhsim03G0030500 Rhododendron simsii HOM05D005441 ORTHO05D006879 4.4e-13 78.6 89 43.8
QL07p005351 Quercus lobata HOM05D005441 ORTHO05D006879 9.2e-11 70.9 57 56.1
Pp3c1_39520 Physcomitrium patens HOM05D005441 ORTHO05D006879 2.1e-10 69.7 73 45.2
Aqoxy3G01901 Aquilegia oxysepala HOM05D005441 ORTHO05D006879 7.8e-10 67.8 73 52.1
unitig_22.g6054 Utricularia gibba HOM05D001412 ORTHO05D002473 2.8e-07 59.3 122 31.1


User provided reference genes

Program Settings