Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb068420 Zea mays HOM05D000509 ORTHO05D446256 6.1e-131 471.1 286 100.0
Zm00001eb068410 Zea mays HOM05D000509 ORTHO05D000466 1.4e-37 161.0 122 95.9
Os04g0649900 Oryza sativa ssp. japonica HOM05D000509 ORTHO05D000466 7.7e-33 145.2 143 72.7
Os02g0158500 Oryza sativa ssp. japonica HOM05D000509 ORTHO05D000466 3.1e-10 70.1 56 62.5
Aqoxy6G02916 Aquilegia oxysepala HOM05D000509 ORTHO05D000466 4.1e-10 69.7 66 50.0
Zm00001eb232590 Zea mays HOM05D000509 ORTHO05D000466 7.0e-10 68.9 55 61.8
CDE07G0074 Ceratophyllum demersum HOM05D000509 ORTHO05D000466 2.0e-09 67.4 59 54.2
Zm00001eb225830 Zea mays HOM05D000509 ORTHO05D000466 4.5e-09 66.2 131 35.9
MBI16_g04097_MAGBIO Magnolia biondii HOM05D000509 ORTHO05D000466 2.9e-08 63.5 59 47.5
Os06g0687600 Oryza sativa ssp. japonica HOM05D000509 ORTHO05D000466 3.8e-08 63.2 55 56.4
HPP92_010364 Vanilla planifolia HOM05D000509 ORTHO05D000466 3.8e-08 63.2 182 33.0
CDE04G2788 Ceratophyllum demersum HOM05D000509 ORTHO05D000466 6.6e-08 62.4 123 36.6
Hma1.2p1_0796F.1_g218980 Hydrangea macrophylla HOM05D000509 ORTHO05D000466 1.9e-07 60.8 55 52.7
PGR102G3086 Punica granatum HOM05D000509 ORTHO05D000466 1.9e-07 60.8 64 50.0
Dinv42176 Davidia involucrata HOM05D000509 ORTHO05D000466 3.3e-07 60.1 57 56.1
ECA246G1321 Erigeron canadensis HOM05D000509 ORTHO05D000466 4.3e-07 59.7 134 38.8
Lsat_1_v5_gn_3_90220 Lactuca sativa HOM05D000509 ORTHO05D000466 5.6e-07 59.3 129 42.6
Oeu010388.1 Olea europaea HOM05D000509 ORTHO05D000466 5.6e-07 59.3 56 53.6
Psat4g085120 Pisum sativum HOM05D000509 ORTHO05D000466 5.6e-07 59.3 60 51.7
Eucgr.I00888 Eucalyptus grandis HOM05D000509 ORTHO05D000466 7.3e-07 58.9 60 51.7
TWI75G1015 Tripterygium wilfordii HOM05D000509 ORTHO05D000466 9.5e-07 58.5 63 47.6
MBI03_g14515_MAGBIO Magnolia biondii HOM05D000509 ORTHO05D000466 1.2e-06 58.2 59 47.5
Migut.L00176 Erythranthe guttata HOM05D000509 ORTHO05D000466 1.6e-06 57.8 56 55.4
vmacro05262 Vaccinium macrocarpon HOM05D000509 ORTHO05D000466 1.6e-06 57.8 127 32.3
VMungo0251G0357 Vigna mungo HOM05D000509 ORTHO05D000466 1.6e-06 57.8 55 50.9
MSTRG.27738 Avicennia marina HOM05D000509 ORTHO05D000466 2.1e-06 57.4 129 40.3
CSS0003830 Camellia sinensis var. sinensis HOM05D000509 ORTHO05D000466 2.1e-06 57.4 58 50.0
Lsat_1_v5_gn_4_164481 Lactuca sativa HOM05D000509 ORTHO05D000466 2.1e-06 57.4 126 38.9
SalBow5G5179 Salvia bowleyana HOM05D000509 ORTHO05D000466 2.1e-06 57.4 60 50.0
SEGI_37850 Sequoiadendron giganteum HOM05D000509 ORTHO05D000466 2.8e-06 57.0 55 47.3
Solyc02g064945.1 Solanum lycopersicum HOM05D000509 ORTHO05D000466 2.8e-06 57.0 60 53.3
Sopen02g015070 Solanum pennellii HOM05D000509 ORTHO05D000466 2.8e-06 57.0 60 53.3
Zm00001eb411100 Zea mays HOM05D000509 ORTHO05D000466 2.8e-06 57.0 54 51.9
Cc07_g06260 Coffea canephora HOM05D000509 ORTHO05D000466 3.6e-06 56.6 127 33.9
ECA232G4955 Erigeron canadensis HOM05D000509 ORTHO05D000466 3.6e-06 56.6 130 32.3
Medtr4g094895 Medicago truncatula HOM05D000509 ORTHO05D000466 3.6e-06 56.6 59 49.2
Oeu044296.1 Olea europaea HOM05D000509 ORTHO05D000466 3.6e-06 56.6 57 49.1
TPR.G14590 Trifolium pratense HOM05D000509 ORTHO05D000466 3.6e-06 56.6 59 49.2
TAR376G0426 Trochodendron aralioides HOM05D000509 ORTHO05D000466 3.6e-06 56.6 124 31.5
Cpa.g.sc200.19 Carica papaya HOM05D000509 ORTHO05D000466 4.7e-06 56.2 64 46.9
HanXRQChr11g0328301 Helianthus annuus HOM05D000509 ORTHO05D000466 4.7e-06 56.2 184 31.0
Lj7A74T40 Lonicera japonica HOM05D000509 ORTHO05D000466 4.7e-06 56.2 51 54.9
Nitab4.5_0009331g0010 Nicotiana tabacum HOM05D000509 ORTHO05D000466 4.7e-06 56.2 62 45.2
Peaxi162Scf00549g00028 Petunia axillaris HOM05D000509 ORTHO05D000466 4.7e-06 56.2 51 58.8
Rhsim10G0113500 Rhododendron simsii HOM05D000509 ORTHO05D000466 4.7e-06 56.2 64 48.4
PGSC0003DMG400025875 Solanum tuberosum HOM05D000509 ORTHO05D000466 4.7e-06 56.2 60 48.3
THA.LOC104827326 Tarenaya hassleriana HOM05D000509 ORTHO05D000466 4.7e-06 56.2 128 33.6
TWI09G1421 Tripterygium wilfordii HOM05D000509 ORTHO05D000466 4.7e-06 56.2 127 31.5
Actinidia36469 Actinidia chinensis HOM05D000509 ORTHO05D000466 6.1e-06 55.8 58 53.4
Ca_27523_v3 Cicer arietinum L. HOM05D000509 ORTHO05D000466 6.1e-06 55.8 58 48.3
Oeu013733.1 Olea europaea HOM05D000509 ORTHO05D000466 6.1e-06 55.8 67 46.3
Potri.005G141300 Populus trichocarpa HOM05D000509 ORTHO05D000466 6.1e-06 55.8 55 50.9
Zm00001eb138390 Zea mays HOM05D000509 ORTHO05D000466 6.1e-06 55.8 50 56.0
MSTRG.20173 Avicennia marina HOM05D000509 ORTHO05D000466 8.0e-06 55.5 57 47.4
Haze_15369 Corylus avellana HOM05D000509 ORTHO05D000466 8.0e-06 55.5 55 50.9
Dinv30020 Davidia involucrata HOM05D000509 ORTHO05D000466 8.0e-06 55.5 51 56.9
Nitab4.5_0014182g0010 Nicotiana tabacum HOM05D000509 ORTHO05D000466 8.0e-06 55.5 62 45.2
Oeu013234.1 Olea europaea HOM05D000509 ORTHO05D000466 8.0e-06 55.5 56 55.4


User provided reference genes

Program Settings