Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb066410 Zea mays HOM05D005347 ORTHO05D007838 7.8e-107 390.6 212 100.0
Zm00001eb433610 Zea mays HOM05D005347 ORTHO05D007838 2.7e-75 285.8 147 94.6
Lj1g0017211 Lotus japonicus HOM05D005347 ORTHO05D007838 6.5e-69 264.6 147 87.1
Lalb_Chr25g0287111 Lupinus albus HOM05D005347 ORTHO05D007838 6.5e-69 264.6 147 87.1
Aa31sc144G60 Aethionema arabicum HOM05D005347 ORTHO05D007838 1.1e-68 263.8 150 84.7
Sp6g30390 Schrenkiella parvula HOM05D005347 ORTHO05D007838 1.1e-68 263.8 150 84.7
Phvul.001G132200 Phaseolus vulgaris HOM05D005347 ORTHO05D007838 1.4e-68 263.5 147 86.4
AL6G24240 Arabidopsis lyrata HOM05D005347 ORTHO05D007838 1.9e-68 263.1 150 84.7
AT5G13630 Arabidopsis thaliana HOM05D005347 ORTHO05D007838 1.9e-68 263.1 150 84.7
CARHR199810 Cardamine hirsuta HOM05D005347 ORTHO05D007838 1.9e-68 263.1 150 84.7
Lalb_Chr20g0110491 Lupinus albus HOM05D005347 ORTHO05D007838 3.2e-68 262.3 147 85.7
VMungo1383G0107 Vigna mungo HOM05D005347 ORTHO05D007838 3.2e-68 262.3 147 85.7
BcaB01g05345 Brassica carinata HOM05D005347 ORTHO05D007838 5.5e-68 261.5 151 84.8
A03p06120 Brassica napus HOM05D005347 ORTHO05D007838 5.5e-68 261.5 151 84.8
C03p07120 Brassica napus HOM05D005347 ORTHO05D007838 5.5e-68 261.5 151 84.8
BolC3t13211H Brassica oleracea HOM05D005347 ORTHO05D007838 5.5e-68 261.5 151 84.8
BraA03t09944Z Brassica rapa HOM05D005347 ORTHO05D007838 5.5e-68 261.5 151 84.8
Glyma.10G097800 Glycine max HOM05D005347 ORTHO05D007838 5.5e-68 261.5 147 85.0
Glyma.19G139300 Glycine max HOM05D005347 ORTHO05D007838 7.1e-68 261.2 147 85.7
arahy.Tifrunner.gnm1.ann1.RSU8B2 Arachis hypogaea HOM05D005347 ORTHO05D007838 9.3e-68 260.8 147 84.4
arahy.Tifrunner.gnm1.ann1.XR90DA Arachis hypogaea HOM05D005347 ORTHO05D007838 9.3e-68 260.8 147 84.4
Phvul.007G252700 Phaseolus vulgaris HOM05D005347 ORTHO05D007838 9.3e-68 260.8 147 84.4
BcaB01g05344 Brassica carinata HOM05D005347 ORTHO05D021808 1.2e-67 260.4 151 84.8
Carub.0006s1179 Capsella rubella HOM05D005347 ORTHO05D007838 1.2e-67 260.4 150 84.0
CDE05G2234 Ceratophyllum demersum HOM05D005347 ORTHO05D007838 1.2e-67 260.4 147 84.4
CiPaw.10G033300 Carya illinoinensis HOM05D005347 ORTHO05D007838 1.6e-67 260.0 147 87.1
Thhalv10012443m.g Eutrema salsugineum HOM05D005347 ORTHO05D007838 2.1e-67 259.6 150 83.3
Ca_26018_v3 Cicer arietinum L. HOM05D005347 ORTHO05D007838 2.7e-67 259.2 147 83.7
MELO3C023131.2 Cucumis melo HOM05D005347 ORTHO05D007838 2.7e-67 259.2 147 86.4
Nitab4.5_0010636g0020 Nicotiana tabacum HOM05D005347 ORTHO05D007838 2.7e-67 259.2 150 83.3
TPR.G10615 Trifolium pratense HOM05D005347 ORTHO05D007838 2.7e-67 259.2 147 83.7
FvH4_6g23800 Fragaria vesca HOM05D005347 ORTHO05D007838 3.5e-67 258.8 147 87.1
FAN14G0383 Fragaria x ananassa HOM05D005347 ORTHO05D007838 3.5e-67 258.8 147 87.1
Cfa016819 Carpinus fangiana HOM05D005347 ORTHO05D007838 4.6e-67 258.5 147 86.4
Haze_19858 Corylus avellana HOM05D005347 ORTHO05D007838 4.6e-67 258.5 147 86.4
FAN02G3940 Fragaria x ananassa HOM05D005347 ORTHO05D007838 4.6e-67 258.5 147 87.1
FAN05G5756 Fragaria x ananassa HOM05D005347 ORTHO05D007838 4.6e-67 258.5 147 87.1
FAN09G2062 Fragaria x ananassa HOM05D005347 ORTHO05D007838 4.6e-67 258.5 147 87.1
Lju124C41T11 Lonicera japonica HOM05D005347 ORTHO05D021808 4.6e-67 258.5 150 82.7
PGR004G1765 Punica granatum HOM05D005347 ORTHO05D007838 4.6e-67 258.5 147 85.7
RcHm_v2.0_Chr3g0482331 Rosa chinensis HOM05D005347 ORTHO05D007838 4.6e-67 258.5 147 86.4
CAN.G676.69 Capsicum annuum HOM05D005347 ORTHO05D007838 6.0e-67 258.1 147 83.0
Eucgr.A02348 Eucalyptus grandis HOM05D005347 ORTHO05D007838 6.0e-67 258.1 147 85.7
HanXRQChr10g0288781 Helianthus annuus HOM05D005347 ORTHO05D007838 6.0e-67 258.1 150 82.7
MBI17_g13973_MAGBIO Magnolia biondii HOM05D005347 ORTHO05D007838 6.0e-67 258.1 160 81.2
Nn7g36281 Nelumbo nucifera HOM05D005347 ORTHO05D007838 6.0e-67 258.1 147 85.7
SGA_v2.0_scaffold105G30411 Striga asiatica HOM05D005347 ORTHO05D007838 6.0e-67 258.1 150 82.0
TWI53G0247 Tripterygium wilfordii HOM05D005347 ORTHO05D007838 6.0e-67 258.1 147 85.7
Cpa.g.sc92.51 Carica papaya HOM05D005347 ORTHO05D007838 7.9e-67 257.7 147 86.4
ClCG04G000090 Citrullus lanatus HOM05D005347 ORTHO05D007838 7.9e-67 257.7 147 85.7
CsaV3_4G011730 Cucumis sativus L. HOM05D005347 ORTHO05D007838 7.9e-67 257.7 147 85.7
Prupe.7G061100 Prunus persica HOM05D005347 ORTHO05D007838 7.9e-67 257.7 147 86.4
Sc04g0002790 Simmondsia chinensis HOM05D005347 ORTHO05D007838 1.0e-66 257.3 147 85.7
HanXRQChr10g0296641 Helianthus annuus HOM05D005347 ORTHO05D007838 1.3e-66 256.9 150 82.0
SalBow6G2907 Salvia bowleyana HOM05D005347 ORTHO05D007838 1.3e-66 256.9 147 83.7
Duzib093G0142 Durio zibethinus HOM05D005347 ORTHO05D007838 1.8e-66 256.5 160 80.6
Glyma.03G137000 Glycine max HOM05D005347 ORTHO05D007838 1.8e-66 256.5 147 83.7
MD03G1176300 Malus domestica HOM05D005347 ORTHO05D021808 1.8e-66 256.5 147 85.7
MD12G1073700 Malus domestica HOM05D005347 ORTHO05D007838 1.8e-66 256.5 147 85.7
MD14G1072000 Malus domestica HOM05D005347 ORTHO05D007838 1.8e-66 256.5 147 85.7
Psat6g120040 Pisum sativum HOM05D005347 ORTHO05D007838 1.8e-66 256.5 147 83.0
QL07p000318 Quercus lobata HOM05D005347 ORTHO05D007838 1.8e-66 256.5 160 80.6
Ciclev10004154m.g Citrus clementina HOM05D005347 ORTHO05D007838 2.3e-66 256.1 150 84.0
COL.COLO4_28282 Corchorus olitorius HOM05D005347 ORTHO05D007838 2.3e-66 256.1 147 85.0
Lsat_1_v5_gn_9_29020 Lactuca sativa HOM05D005347 ORTHO05D007838 2.3e-66 256.1 150 82.7
Lsat_1_v5_gn_9_29121 Lactuca sativa HOM05D005347 ORTHO05D007838 2.3e-66 256.1 150 82.7
Nitab4.5_0005195g0040 Nicotiana tabacum HOM05D005347 ORTHO05D007838 2.3e-66 256.1 150 82.0
TAR369G0767 Trochodendron aralioides HOM05D005347 ORTHO05D021808 2.3e-66 256.1 147 85.0
TAR465G0003 Trochodendron aralioides HOM05D005347 ORTHO05D007838 2.3e-66 256.1 147 85.0
TAR623G0733 Trochodendron aralioides HOM05D005347 ORTHO05D021808 2.3e-66 256.1 147 85.0
Cc06_g17100 Coffea canephora HOM05D005347 ORTHO05D007838 3.0e-66 255.8 147 83.0
Dinv12481 Davidia involucrata HOM05D005347 ORTHO05D007838 3.0e-66 255.8 147 85.7
Manes.08G050600 Manihot esculenta HOM05D005347 ORTHO05D007838 3.9e-66 255.4 147 85.0
Sabra06G0035800 Salix brachista HOM05D005347 ORTHO05D007838 3.9e-66 255.4 147 85.0
Sed0003738 Sechium edule HOM05D005347 ORTHO05D007838 3.9e-66 255.4 147 85.0
MSTRG.10814 Avicennia marina HOM05D005347 ORTHO05D007838 5.1e-66 255.0 147 83.0
Oeu017946.1 Olea europaea HOM05D005347 ORTHO05D007838 5.1e-66 255.0 147 85.7
Peaxi162Scf00130g00022 Petunia axillaris HOM05D005347 ORTHO05D007838 5.1e-66 255.0 150 83.3
Thecc.05G153600 Theobroma cacao HOM05D005347 ORTHO05D007838 5.1e-66 255.0 147 84.4
Potri.006G051100 Populus trichocarpa HOM05D005347 ORTHO05D007838 6.7e-66 254.6 147 85.0
Rhsim04G0102500 Rhododendron simsii HOM05D005347 ORTHO05D007838 6.7e-66 254.6 160 79.4
CSS0016317 Camellia sinensis var. sinensis HOM05D005347 ORTHO05D007838 8.7e-66 254.2 147 85.0
AUR62024447 Chenopodium quinoa HOM05D005347 ORTHO05D007838 8.7e-66 254.2 160 79.4
AUR62026037 Chenopodium quinoa HOM05D005347 ORTHO05D007838 8.7e-66 254.2 160 79.4
ECA247G2461 Erigeron canadensis HOM05D005347 ORTHO05D007838 8.7e-66 254.2 150 81.3
Solyc04g015750.3 Solanum lycopersicum HOM05D005347 ORTHO05D007838 8.7e-66 254.2 150 82.7
Sopen04g007830 Solanum pennellii HOM05D005347 ORTHO05D007838 8.7e-66 254.2 150 82.7
EL10Ac3g07089 Beta vulgaris HOM05D005347 ORTHO05D007838 1.1e-65 253.8 160 79.4
Migut.J01759 Erythranthe guttata HOM05D005347 ORTHO05D007838 1.1e-65 253.8 151 81.5
Gohir.A09G122100 Gossypium hirsutum HOM05D005347 ORTHO05D007838 1.1e-65 253.8 147 84.4
Gorai.006G136500 Gossypium raimondii HOM05D005347 ORTHO05D007838 1.1e-65 253.8 147 84.4
Nn2g15252 Nelumbo nucifera HOM05D005347 ORTHO05D007838 1.1e-65 253.8 147 83.0
Actinidia38547 Actinidia chinensis HOM05D005347 ORTHO05D007838 2.5e-65 252.7 147 83.7
Dinv39601 Davidia involucrata HOM05D005347 ORTHO05D007838 2.5e-65 252.7 147 84.4
Actinidia17237 Actinidia chinensis HOM05D005347 ORTHO05D007838 3.3e-65 252.3 160 78.8
Oeu008920.1 Olea europaea HOM05D005347 ORTHO05D007838 3.3e-65 252.3 147 85.0
Ah.13g076460 Amaranthus hybridus HOM05D005347 ORTHO05D007838 4.3e-65 251.9 147 83.0
Aqoxy2G00152 Aquilegia oxysepala HOM05D005347 ORTHO05D007838 4.3e-65 251.9 147 81.6
Duzib128G0418 Durio zibethinus HOM05D005347 ORTHO05D007838 4.3e-65 251.9 147 84.4
HPP92_012089 Vanilla planifolia HOM05D005347 ORTHO05D007838 4.3e-65 251.9 147 83.0
Atru.chr1.1096 Acer truncatum HOM05D005347 ORTHO05D007838 7.4e-65 251.1 150 82.7
Gohir.D09G118200 Gossypium hirsutum HOM05D005347 ORTHO05D007838 7.4e-65 251.1 147 83.7
PGSC0003DMG400027276 Solanum tuberosum HOM05D005347 ORTHO05D007838 7.4e-65 251.1 160 78.1
Hma1.2p1_2002F.1_g310740 Hydrangea macrophylla HOM05D005347 ORTHO05D007838 1.3e-64 250.4 147 83.0
unitig_578.g15983 Utricularia gibba HOM05D005347 ORTHO05D007838 1.6e-64 250.0 150 78.7
DCAR_013602 Daucus carota HOM05D005347 ORTHO05D007838 3.7e-64 248.8 147 83.0
PSO339G0901 Papaver somniferum HOM05D005347 ORTHO05D007838 4.8e-64 248.4 147 81.0
PSO384G4351 Papaver somniferum HOM05D005347 ORTHO05D007838 4.8e-64 248.4 147 81.0
ATR0626G393 Amborella trichopoda HOM05D005347 ORTHO05D007838 1.8e-63 246.5 147 81.0
CDE07G0141 Ceratophyllum demersum HOM05D005347 ORTHO05D021808 1.8e-63 246.5 138 84.8
SEGI_14472 Sequoiadendron giganteum HOM05D005347 ORTHO05D007838 1.5e-62 243.4 147 79.6
GSVIVG01033277001 Vitis vinifera HOM05D005347 ORTHO05D007838 1.2e-59 233.8 138 84.1
SMO347G0130 Selaginella moellendorffii HOM05D005347 ORTHO05D007838 7.4e-57 224.6 148 71.6
Pp3c10_13960 Physcomitrium patens HOM05D005347 ORTHO05D007838 1.8e-55 219.9 148 69.6
Pp3c10_13970 Physcomitrium patens HOM05D005347 ORTHO05D007838 1.8e-55 219.9 148 69.6
Mapoly0008s0194 Marchantia polymorpha HOM05D005347 ORTHO05D007838 3.1e-55 219.2 148 68.9
CBR_g40549 Chara braunii HOM05D005347 ORTHO05D007838 2.2e-53 213.0 148 68.9
AagrBONN_evm.TU.Sc2ySwM_368.2268 Anthoceros agrestis HOM05D005347 ORTHO05D007838 1.9e-52 209.9 148 64.9
PRCOL_00001535 Prasinoderma coloniale HOM05D005347 ORTHO05D007838 6.7e-50 201.4 148 61.5
Cre07.g325500 Chlamydomonas reinhardtii HOM05D005347 ORTHO05D007838 1.7e-48 196.8 147 61.9
MCO07G263 Micromonas commoda HOM05D005347 ORTHO05D007838 2.8e-48 196.1 147 64.6
MD09G1118200 Malus domestica HOM05D005347 ORTHO05D007838 8.2e-48 194.5 120 84.2
vmacro09075 Vaccinium macrocarpon HOM05D005347 ORTHO05D007838 1.7e-32 143.7 160 50.0
Psat4g101600 Pisum sativum HOM05D000140 ORTHO05D014072 3.8e-13 79.3 118 39.0


User provided reference genes

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