Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb064090 Zea mays HOM05D006925 ORTHO05D008830 1.4e-131 473.0 241 100.0
CDE05G0936 Ceratophyllum demersum HOM05D006925 ORTHO05D008830 1.2e-66 257.3 180 65.6
COL.COLO4_31098 Corchorus olitorius HOM05D006925 ORTHO05D008830 1.5e-66 256.9 180 66.7
FAN08G3037 Fragaria x ananassa HOM05D006925 ORTHO05D008830 2.6e-66 256.1 180 67.2
FAN18G1352 Fragaria x ananassa HOM05D006925 ORTHO05D008830 2.6e-66 256.1 180 67.2
FvH4_5g27220 Fragaria vesca HOM05D006925 ORTHO05D008830 7.6e-66 254.6 180 66.7
Nn5g27113 Nelumbo nucifera HOM05D006925 ORTHO05D008830 7.6e-66 254.6 181 64.6
Aqoxy5G01835 Aquilegia oxysepala HOM05D006925 ORTHO05D008830 1.3e-65 253.8 182 64.8
TWI14G0460 Tripterygium wilfordii HOM05D006925 ORTHO05D008830 1.7e-65 253.4 180 67.8
GSVIVG01023121001 Vitis vinifera HOM05D006925 ORTHO05D008830 1.7e-65 253.4 180 66.7
Thecc.06G062200 Theobroma cacao HOM05D006925 ORTHO05D008830 2.2e-65 253.1 180 67.8
CANSAT01G0563 Cannabis sativa HOM05D006925 ORTHO05D008830 2.9e-65 252.7 180 65.6
Cfa004416 Carpinus fangiana HOM05D006925 ORTHO05D008830 3.8e-65 252.3 180 67.2
Dinv30983 Davidia involucrata HOM05D006925 ORTHO05D008830 3.8e-65 252.3 180 66.7
QL02p103778 Quercus lobata HOM05D006925 ORTHO05D008830 6.4e-65 251.5 180 65.0
ClCG10G007640 Citrullus lanatus HOM05D006925 ORTHO05D008830 1.1e-64 250.8 180 66.1
MBI06_g17054_MAGBIO Magnolia biondii HOM05D006925 ORTHO05D008830 1.1e-64 250.8 180 65.6
MD15G1445500 Malus domestica HOM05D006925 ORTHO05D008830 1.1e-64 250.8 180 65.6
Sc03g0005610 Simmondsia chinensis HOM05D006925 ORTHO05D008830 1.1e-64 250.8 180 68.3
Gohir.A10G068400 Gossypium hirsutum HOM05D006925 ORTHO05D008830 1.4e-64 250.4 180 66.1
Hma1.2p1_0157F.1_g069250 Hydrangea macrophylla HOM05D006925 ORTHO05D008830 3.2e-64 249.2 180 66.1
RcHm_v2.0_Chr7g0218321 Rosa chinensis HOM05D006925 ORTHO05D008830 3.2e-64 249.2 180 65.6
MSTRG.16455 Avicennia marina HOM05D006925 ORTHO05D008830 4.2e-64 248.8 180 64.4
Ah.02g128580 Amaranthus hybridus HOM05D006925 ORTHO05D008830 5.4e-64 248.4 180 65.0
Gohir.D10G082800 Gossypium hirsutum HOM05D006925 ORTHO05D008830 7.1e-64 248.1 180 65.6
Gorai.011G089700 Gossypium raimondii HOM05D006925 ORTHO05D008830 7.1e-64 248.1 180 65.6
Prupe.1G587400 Prunus persica HOM05D006925 ORTHO05D008830 9.3e-64 247.7 180 65.0
Sopen10g013620 Solanum pennellii HOM05D006925 ORTHO05D008830 1.2e-63 247.3 180 65.6
A06p43640 Brassica napus HOM05D006925 ORTHO05D008830 2.1e-63 246.5 182 65.9
BraA06t27246Z Brassica rapa HOM05D006925 ORTHO05D008830 2.1e-63 246.5 182 65.9
PGR042G2053 Punica granatum HOM05D006925 ORTHO05D008830 2.7e-63 246.1 180 65.0
PGSC0003DMG400003436 Solanum tuberosum HOM05D006925 ORTHO05D008830 2.7e-63 246.1 180 65.0
Solyc10g044840.2 Solanum lycopersicum HOM05D006925 ORTHO05D008830 3.5e-63 245.7 180 65.0
unitig_8.g4519 Utricularia gibba HOM05D006925 ORTHO05D008830 3.5e-63 245.7 180 62.8
THA.LOC104824095 Tarenaya hassleriana HOM05D006925 ORTHO05D008830 4.6e-63 245.4 180 63.9
AL5G11640 Arabidopsis lyrata HOM05D006925 ORTHO05D008830 6.0e-63 245.0 181 66.3
BcaC06g31233 Brassica carinata HOM05D006925 ORTHO05D008830 6.0e-63 245.0 181 65.7
Sp2g13680 Schrenkiella parvula HOM05D006925 ORTHO05D008830 6.0e-63 245.0 181 66.3
CiPaw.05G000400 Carya illinoinensis HOM05D006925 ORTHO05D008830 7.9e-63 244.6 180 63.9
Thhalv10004663m.g Eutrema salsugineum HOM05D006925 ORTHO05D008830 7.9e-63 244.6 181 65.7
BcaC06g34054 Brassica carinata HOM05D006925 ORTHO05D008830 1.0e-62 244.2 182 64.8
C07p33220 Brassica napus HOM05D006925 ORTHO05D008830 1.0e-62 244.2 182 64.8
BolC7t43833H Brassica oleracea HOM05D006925 ORTHO05D008830 1.0e-62 244.2 182 64.8
CsaV3_3G006780 Cucumis sativus L. HOM05D006925 ORTHO05D008830 1.0e-62 244.2 181 63.5
Potri.003G046600 Populus trichocarpa HOM05D006925 ORTHO05D008830 1.3e-62 243.8 180 64.4
Duzib160G0166 Durio zibethinus HOM05D006925 ORTHO05D008830 1.7e-62 243.4 180 64.4
Nitab4.5_0002274g0030 Nicotiana tabacum HOM05D006925 ORTHO05D008830 1.7e-62 243.4 180 65.0
ATR1089G139 Amborella trichopoda HOM05D006925 ORTHO05D008830 2.3e-62 243.0 180 62.2
ECA248G0237 Erigeron canadensis HOM05D002199 ORTHO05D007829 2.3e-62 243.0 181 63.0
HanXRQChr03g0071141 Helianthus annuus HOM05D006925 ORTHO05D008830 2.3e-62 243.0 181 61.9
arahy.Tifrunner.gnm1.ann1.EDE5FN Arachis hypogaea HOM05D006925 ORTHO05D008830 3.0e-62 242.7 181 64.6
Aa31LG2G7670 Aethionema arabicum HOM05D006925 ORTHO05D008830 3.9e-62 242.3 182 64.8
DCAR_004828 Daucus carota HOM05D006925 ORTHO05D008830 5.1e-62 241.9 180 62.8
Sabra03G0019700 Salix brachista HOM05D006925 ORTHO05D000812 5.1e-62 241.9 180 62.8
CAN.G402.4 Capsicum annuum HOM05D006925 ORTHO05D008830 6.6e-62 241.5 180 64.4
Peaxi162Scf00055g00018 Petunia axillaris HOM05D006925 ORTHO05D008830 6.6e-62 241.5 180 64.4
arahy.Tifrunner.gnm1.ann1.MTF64G Arachis hypogaea HOM05D006925 ORTHO05D008830 8.7e-62 241.1 181 64.1
Cc02_g23820 Coffea canephora HOM05D006925 ORTHO05D008830 1.9e-61 240.0 181 61.9
Eucgr.G00053 Eucalyptus grandis HOM05D006925 ORTHO05D008830 1.9e-61 240.0 181 64.6
Lsat_1_v5_gn_7_69720 Lactuca sativa HOM05D006925 ORTHO05D008830 2.5e-61 239.6 190 60.0
Migut.B00701 Erythranthe guttata HOM05D006925 ORTHO05D008830 3.3e-61 239.2 182 61.5
Haze_09956 Corylus avellana HOM05D006925 ORTHO05D008830 4.3e-61 238.8 196 60.7
Carub.0005s0146 Capsella rubella HOM05D006925 ORTHO05D008830 7.4e-61 238.0 170 67.6
Actinidia00135 Actinidia chinensis HOM05D006925 ORTHO05D008830 9.6e-61 237.7 180 62.8
CSS0004280 Camellia sinensis var. sinensis HOM05D006925 ORTHO05D008830 9.6e-61 237.7 180 61.7
CSS0028149 Camellia sinensis var. sinensis HOM05D006925 ORTHO05D008830 9.6e-61 237.7 180 61.7
Sed0012673 Sechium edule HOM05D006925 ORTHO05D008830 1.3e-60 237.3 200 59.0
FAN13G1230 Fragaria x ananassa HOM05D006925 ORTHO05D008830 2.1e-60 236.5 165 67.9
Manes.06G015100 Manihot esculenta HOM05D006925 ORTHO05D008830 2.8e-60 236.1 170 66.5
Medtr4g134410 Medicago truncatula HOM05D006925 ORTHO05D008830 6.2e-60 235.0 187 63.1
HPP92_001204 Vanilla planifolia HOM05D006925 ORTHO05D008830 1.1e-59 234.2 180 59.4
VMungo1215G1006 Vigna mungo HOM05D006925 ORTHO05D008830 1.8e-59 233.4 181 63.5
Ca_13518_v3 Cicer arietinum L. HOM05D006925 ORTHO05D008830 5.3e-59 231.9 183 63.9
AUR62032491 Chenopodium quinoa HOM05D006925 ORTHO05D008830 6.9e-59 231.5 172 66.3
PSO210G4845 Papaver somniferum HOM05D006925 ORTHO05D008830 6.9e-59 231.5 182 62.1
Phvul.003G090400 Phaseolus vulgaris HOM05D006925 ORTHO05D008830 6.9e-59 231.5 180 63.3
Glyma.07G271000 Glycine max HOM05D006925 ORTHO05D008830 3.4e-58 229.2 182 62.1
MELO3C016443.2 Cucumis melo HOM05D006925 ORTHO05D008830 1.3e-57 227.3 165 64.8
Mapoly0001s0380 Marchantia polymorpha HOM05D006925 ORTHO05D008830 1.3e-57 227.3 181 60.8
Lj4g0023352 Lotus japonicus HOM05D006925 ORTHO05D008830 2.9e-57 226.1 184 61.4
Lalb_Chr07g0176851 Lupinus albus HOM05D006925 ORTHO05D008830 6.4e-57 224.9 227 53.7
Pp3c15_4340 Physcomitrium patens HOM05D006925 ORTHO05D008830 9.3e-56 221.1 182 57.1
EL10Ac6g13952 Beta vulgaris HOM05D006925 ORTHO05D008830 3.5e-55 219.2 234 50.0
Pp3c9_8480 Physcomitrium patens HOM05D006925 ORTHO05D008830 9.6e-53 211.1 182 55.5
AUR62040119 Chenopodium quinoa HOM05D006925 ORTHO05D008830 3.7e-52 209.1 198 56.1
Hund15314 Selenicereus undatus HOM05D006925 ORTHO05D008830 8.1e-52 208.0 165 62.4
Lj5A307T31 Lonicera japonica HOM05D006925 ORTHO05D008830 1.1e-51 207.6 165 61.8
Psat4g001760 Pisum sativum HOM05D006925 ORTHO05D008830 1.4e-51 207.2 184 57.6
AagrBONN_evm.TU.Sc2ySwM_369.585 Anthoceros agrestis HOM05D006925 ORTHO05D008830 2.4e-51 206.5 177 55.4
SGA_v2.0_scaffold254G45226 Striga asiatica HOM05D006925 ORTHO05D008830 3.1e-51 206.1 243 43.6
vmacro01630 Vaccinium macrocarpon HOM05D006925 ORTHO05D008830 3.4e-50 202.6 168 61.3
Nitab4.5_0000288g0050 Nicotiana tabacum HOM05D006925 ORTHO05D008830 8.4e-49 198.0 180 55.0
TAR628G1169 Trochodendron aralioides HOM05D006925 ORTHO05D008830 3.2e-48 196.1 138 65.2
SMO358G0233 Selaginella moellendorffii HOM05D006925 ORTHO05D008830 7.1e-48 194.9 180 54.4
TPR.G5931 Trifolium pratense HOM05D006925 ORTHO05D008830 2.1e-47 193.4 190 52.6
SEGI_06138 Sequoiadendron giganteum HOM05D006925 ORTHO05D008830 6.0e-47 191.8 170 55.9
CARHR144990 Cardamine hirsuta HOM05D006925 ORTHO05D008830 6.7e-46 188.3 143 63.6
AT2G02410 Arabidopsis thaliana HOM05D006925 ORTHO05D008830 3.2e-40 169.5 167 53.9
Sabra03G0019900 Salix brachista HOM05D006925 ORTHO05D008830 3.7e-28 129.4 101 59.4
Ciclev10003645m.g Citrus clementina HOM05D006925 ORTHO05D008830 6.3e-28 128.6 104 56.7
Rhsim11G0114700 Rhododendron simsii HOM05D006925 ORTHO05D008830 5.3e-27 125.6 226 38.1
Os03g0843200 Oryza sativa ssp. japonica HOM05D006925 ORTHO05D008830 5.5e-24 115.5 57 96.5
SMO201G0205 Selaginella moellendorffii HOM05D006925 ORTHO05D008830 5.3e-19 99.0 83 54.2
SMO199G0001 Selaginella moellendorffii HOM05D006925 ORTHO05D008830 6.1e-15 85.5 68 58.8
SEGI_30664 Sequoiadendron giganteum HOM05D006925 ORTHO05D008830 1.8e-14 84.0 86 50.0
CBR_g49407 Chara braunii HOM05D000019 ORTHO05D000002 3.0e-14 83.2 125 38.4
PRCOL_00002508 Prasinoderma coloniale HOM05D006925 ORTHO05D008830 5.2e-14 82.4 151 35.1
AL5G11650 Arabidopsis lyrata HOM05D006925 ORTHO05D008830 6.5e-09 65.5 43 69.8
TAR628G1563 Trochodendron aralioides HOM05D006925 ORTHO05D008830 2.5e-08 63.5 43 65.1
CBR_g46374 Chara braunii HOM05D000019 ORTHO05D000353 4.2e-08 62.8 44 59.1
Glyma.17G002900 Glycine max HOM05D006925 ORTHO05D008830 4.2e-08 62.8 43 67.4
Glyma.20G064100 Glycine max HOM05D006925 ORTHO05D008830 1.8e-06 57.4 41 65.9


User provided reference genes

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