Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb061990 Zea mays HOM05D002134 ORTHO05D008658 0.0e+00 1271.9 794 100.0
MBI16_g17456_MAGBIO Magnolia biondii HOM05D002134 ORTHO05D008658 8.8e-87 325.9 602 42.4
GSVIVG01009687001 Vitis vinifera HOM05D002134 ORTHO05D008658 1.9e-73 281.6 610 42.5
Nn5g29542 Nelumbo nucifera HOM05D002134 ORTHO05D008658 6.1e-72 276.6 629 38.2
Dinv36064 Davidia involucrata HOM05D002134 ORTHO05D008658 3.0e-71 274.2 606 38.6
QL02p007944 Quercus lobata HOM05D002134 ORTHO05D008658 1.6e-67 261.9 663 39.4
Cfa018138 Carpinus fangiana HOM05D002134 ORTHO05D008658 4.6e-67 260.4 641 38.2
CiPaw.15G075800 Carya illinoinensis HOM05D002134 ORTHO05D008658 4.6e-67 260.4 602 36.4
TAR376G0546 Trochodendron aralioides HOM05D002134 ORTHO05D008658 1.5e-65 255.4 609 39.7
Eucgr.F01907 Eucalyptus grandis HOM05D002134 ORTHO05D008658 4.7e-64 250.4 594 36.2
Actinidia38014 Actinidia chinensis HOM05D002134 ORTHO05D008658 4.4e-62 243.8 597 37.7
DCAR_008767 Daucus carota HOM05D002134 ORTHO05D008658 5.8e-62 243.4 603 37.8
Manes.05G161600 Manihot esculenta HOM05D002134 ORTHO05D008658 1.3e-61 242.3 593 36.6
Lj1g0006718 Lotus japonicus HOM05D002134 ORTHO05D008658 3.7e-61 240.7 587 35.9
Haze_17986 Corylus avellana HOM05D002134 ORTHO05D008658 4.9e-61 240.4 686 35.6
Sed0018102 Sechium edule HOM05D002134 ORTHO05D008658 1.9e-60 238.4 619 38.6
Medtr3g111740 Medicago truncatula HOM05D002134 ORTHO05D008658 3.2e-60 237.7 598 37.5
Peaxi162Scf00925g00033 Petunia axillaris HOM05D002134 ORTHO05D008658 3.2e-60 237.7 575 36.7
vmacro04518 Vaccinium macrocarpon HOM05D002134 ORTHO05D008658 3.2e-60 237.7 681 35.4
Ciclev10000375m.g Citrus clementina HOM05D002134 ORTHO05D008658 7.0e-60 236.5 597 34.8
Nitab4.5_0000523g0050 Nicotiana tabacum HOM05D002134 ORTHO05D008658 7.0e-60 236.5 567 36.7
CANSAT25G1781 Cannabis sativa HOM05D002134 ORTHO05D008658 9.2e-60 236.1 593 35.8
Aqoxy6G01051 Aquilegia oxysepala HOM05D002134 ORTHO05D008658 1.2e-59 235.7 575 36.0
CSS0008789 Camellia sinensis var. sinensis HOM05D002134 ORTHO05D008658 4.6e-59 233.8 612 36.8
Nitab4.5_0006995g0020 Nicotiana tabacum HOM05D002134 ORTHO05D008658 4.6e-59 233.8 579 36.1
Atru.chr8.2604 Acer truncatum HOM05D002134 ORTHO05D008658 6.0e-59 233.4 614 35.5
Sabra02G0199600 Salix brachista HOM05D002134 ORTHO05D008658 1.7e-58 231.9 597 35.5
PSO675G8956 Papaver somniferum HOM05D002134 ORTHO05D008658 2.3e-58 231.5 613 36.1
Atru.chr13.512 Acer truncatum HOM05D002134 ORTHO05D008658 6.6e-58 229.9 617 35.0
Cc10_g03060 Coffea canephora HOM05D002134 ORTHO05D008658 1.1e-57 229.2 619 35.2
MELO3C003852.2 Cucumis melo HOM05D002134 ORTHO05D008658 1.5e-57 228.8 636 36.0
Ca_15521_v3 Cicer arietinum L. HOM05D002134 ORTHO05D008658 5.6e-57 226.9 608 35.2
PSO541G2605 Papaver somniferum HOM05D002134 ORTHO05D008658 7.3e-57 226.5 633 37.0
Rhsim07G0237200 Rhododendron simsii HOM05D002134 ORTHO05D008658 9.5e-57 226.1 635 34.0
Migut.C00708 Erythranthe guttata HOM05D002134 ORTHO05D008658 1.2e-56 225.7 569 35.3
Lalb_Chr23g0266641 Lupinus albus HOM05D002134 ORTHO05D008658 1.6e-56 225.3 600 34.8
ClCG05G019130 Citrullus lanatus HOM05D002134 ORTHO05D008658 4.7e-56 223.8 731 35.6
Potri.002G262800 Populus trichocarpa HOM05D002134 ORTHO05D008658 4.7e-56 223.8 596 36.9
MBI16_g45959_MAGBIO Magnolia biondii HOM05D002134 ORTHO05D008658 2.3e-55 221.5 539 38.8
PGR031G3893 Punica granatum HOM05D002134 ORTHO05D008658 1.2e-54 219.2 593 37.6
Sopen07g013310 Solanum pennellii HOM05D002134 ORTHO05D008658 1.7e-53 215.3 580 34.1
CsaV3_3G045010 Cucumis sativus L. HOM05D002134 ORTHO05D008658 2.9e-53 214.5 734 35.7
TPR.G12392 Trifolium pratense HOM05D002134 ORTHO05D008658 8.3e-53 213.0 610 35.4
Lj4A785T29 Lonicera japonica HOM05D002134 ORTHO05D008658 1.4e-52 212.2 472 39.0
Glyma.04G033100 Glycine max HOM05D002134 ORTHO05D008658 3.2e-52 211.1 585 35.0
ECA247G2410 Erigeron canadensis HOM05D002134 ORTHO05D008658 4.1e-52 210.7 611 34.2
HanXRQChr04g0105601 Helianthus annuus HOM05D002134 ORTHO05D008658 5.4e-52 210.3 600 35.7
ATR0733G232 Amborella trichopoda HOM05D002134 ORTHO05D008658 9.2e-52 209.5 581 35.5
MD08G1033500 Malus domestica HOM05D002134 ORTHO05D008658 1.2e-51 209.1 542 35.8
SGA_v2.0_scaffold48G18075 Striga asiatica HOM05D002134 ORTHO05D008658 2.7e-51 208.0 610 33.3
Duzib116G0898 Durio zibethinus HOM05D002134 ORTHO05D008658 6.0e-51 206.8 589 32.8
Thecc.08G024500 Theobroma cacao HOM05D002134 ORTHO05D008658 6.0e-51 206.8 631 34.2
Prupe.1G381400 Prunus persica HOM05D002134 ORTHO05D008658 1.0e-50 206.1 532 36.3
FvH4_2g39970 Fragaria vesca HOM05D002134 ORTHO05D008658 3.0e-50 204.5 584 35.3
Gohir.A01G116400 Gossypium hirsutum HOM05D002134 ORTHO05D008658 1.9e-49 201.8 594 32.5
Phvul.009G057000 Phaseolus vulgaris HOM05D002134 ORTHO05D008658 3.3e-49 201.1 567 33.2
Solyc07g025380.3 Solanum lycopersicum HOM05D002134 ORTHO05D008658 5.6e-49 200.3 580 33.1
Gorai.002G128800 Gossypium raimondii HOM05D002134 ORTHO05D008658 1.6e-48 198.7 589 33.3
SalBow7G3154 Salvia bowleyana HOM05D002134 ORTHO05D008658 1.6e-48 198.7 594 33.2
Gohir.D01G104800 Gossypium hirsutum HOM05D002134 ORTHO05D008658 2.8e-48 198.0 589 32.8
Psat0s2660g0080 Pisum sativum HOM05D002134 ORTHO05D008658 2.8e-48 198.0 588 34.5
RcHm_v2.0_Chr6g0300781 Rosa chinensis HOM05D002134 ORTHO05D008658 1.8e-47 195.3 552 37.1
TWI12G0094 Tripterygium wilfordii HOM05D002134 ORTHO05D008658 2.4e-47 194.9 607 34.9
CAN.G52.14 Capsicum annuum HOM05D002134 ORTHO05D008658 5.2e-47 193.7 574 33.1
arahy.Tifrunner.gnm1.ann1.20CGAG Arachis hypogaea HOM05D002134 ORTHO05D008658 6.8e-47 193.4 613 37.0
Duzib093G1270 Durio zibethinus HOM05D002134 ORTHO05D008658 1.2e-46 192.6 582 33.2
Glyma.06G033100 Glycine max HOM05D002134 ORTHO05D008658 4.4e-46 190.7 643 31.4
MD15G1030200 Malus domestica HOM05D002134 ORTHO05D008658 4.9e-45 187.2 611 32.7
FAN27G2069 Fragaria x ananassa HOM05D002134 ORTHO05D008658 6.4e-45 186.8 607 32.9
THA.LOC104813840 Tarenaya hassleriana HOM05D002134 ORTHO05D008658 5.4e-44 183.7 600 34.0
VMungo1309G2241 Vigna mungo HOM05D006576 ORTHO05D008644 3.5e-43 181.0 539 35.8
PGSC0003DMG400007581 Solanum tuberosum HOM05D002134 ORTHO05D008658 7.8e-43 179.9 619 30.9
Lsat_1_v5_gn_1_17581 Lactuca sativa HOM05D002134 ORTHO05D008658 3.0e-42 177.9 615 34.1
CDE02G0502 Ceratophyllum demersum HOM05D002134 ORTHO05D008658 1.9e-41 175.3 611 30.6
Hma1.2p1_0203F.1_g086500 Hydrangea macrophylla HOM05D002134 ORTHO05D008658 9.6e-41 172.9 225 50.7
Sed0020001 Sechium edule HOM05D002134 ORTHO05D008658 1.2e-40 172.6 489 39.3
FAN15G0789 Fragaria x ananassa HOM05D002134 ORTHO05D003893 3.1e-39 167.9 582 33.2
Hund27548 Selenicereus undatus HOM05D002134 ORTHO05D008658 4.0e-39 167.5 557 33.6
Hund27550 Selenicereus undatus HOM05D002134 ORTHO05D008658 4.0e-39 167.5 557 33.6
unitig_37.g12967 Utricularia gibba HOM05D002134 ORTHO05D008658 5.3e-39 167.2 572 34.6
FAN20G2431 Fragaria x ananassa HOM05D002134 ORTHO05D003893 1.5e-38 165.6 580 33.1
Aa31LG4G5340 Aethionema arabicum HOM05D002134 ORTHO05D008658 3.4e-38 164.5 662 31.9
Thhalv10019843m.g Eutrema salsugineum HOM05D002134 ORTHO05D008658 9.9e-38 162.9 607 32.1
BraA07t31617Z Brassica rapa HOM05D002134 ORTHO05D008658 4.9e-37 160.6 595 30.3
A07p40750 Brassica napus HOM05D002134 ORTHO05D008658 3.5e-35 154.5 587 30.2
arahy.Tifrunner.gnm1.ann1.6UHH7V Arachis hypogaea HOM05D002134 ORTHO05D008658 3.9e-34 151.0 640 31.1
Carub.0002s2196 Capsella rubella HOM05D002134 ORTHO05D008658 6.6e-34 150.2 600 32.2
BcaC08g46941 Brassica carinata HOM05D000061 ORTHO05D008658 5.6e-33 147.1 596 29.9
C06p49130 Brassica napus HOM05D002134 ORTHO05D008658 5.6e-33 147.1 595 29.7
BolC6t39947H Brassica oleracea HOM05D002134 ORTHO05D008658 5.6e-33 147.1 595 29.7
SEGI_00628 Sequoiadendron giganteum HOM05D002134 ORTHO05D008658 2.8e-32 144.8 619 29.7
AL2G35050 Arabidopsis lyrata HOM05D002134 ORTHO05D008658 1.5e-30 139.0 601 32.3
Lalb_Chr08g0245851 Lupinus albus HOM05D002134 ORTHO05D008658 5.8e-30 137.1 612 28.4
HPP92_018472 Vanilla planifolia HOM05D002134 ORTHO05D008658 3.8e-29 134.4 368 36.4
Sp5g30280 Schrenkiella parvula HOM05D002134 ORTHO05D008658 1.9e-28 132.1 611 28.0
AT1G75150 Arabidopsis thaliana HOM05D002134 ORTHO05D008658 5.4e-28 130.6 604 31.6
BcaC08g46976 Brassica carinata HOM05D002134 ORTHO05D008658 7.1e-28 130.2 613 28.7
CARHR068480 Cardamine hirsuta HOM05D002134 ORTHO05D008658 9.3e-28 129.8 610 30.2
Sc02g0006290 Simmondsia chinensis HOM05D002134 ORTHO05D008658 6.0e-27 127.1 485 29.5
EL10Ac1g01833 Beta vulgaris HOM05D002134 ORTHO05D008658 1.0e-26 126.3 599 30.1
Pp3c7_550 Physcomitrium patens HOM05D002134 ORTHO05D008658 1.7e-21 109.0 618 26.5
Pp3c7_551 Physcomitrium patens HOM05D002134 ORTHO05D008658 1.7e-21 109.0 618 26.5
SHI17315 Sapria himalayana HOM05D002134 ORTHO05D008658 8.4e-21 106.7 199 38.7
Mapoly0032s0034 Marchantia polymorpha HOM05D002134 ORTHO05D008658 1.3e-18 99.4 615 25.7
Cpa.g.sc64.74 Carica papaya HOM05D002134 ORTHO05D008658 2.3e-18 98.6 378 29.9
HPP92_018471 Vanilla planifolia HOM05D002134 ORTHO05D008658 5.6e-17 94.0 183 41.5
SMO144G0024 Selaginella moellendorffii HOM05D002134 ORTHO05D008658 1.3e-16 92.8 558 26.0
Zm00001eb212390 Zea mays HOM05D002134 ORTHO05D008658 6.9e-15 87.0 127 48.0
COL.COLO4_26340 Corchorus olitorius HOM05D005308 ORTHO05D006494 1.7e-13 82.4 355 27.3
AUR62034948 Chenopodium quinoa HOM05D002134 ORTHO05D008658 2.2e-13 82.0 483 25.9
AUR62035457 Chenopodium quinoa HOM05D002134 ORTHO05D008658 6.0e-11 73.9 641 24.2
Ah.11g043170 Amaranthus hybridus HOM05D002134 ORTHO05D008658 2.3e-10 72.0 605 26.0
Cpa.g.sc64.73 Carica papaya HOM05D002134 ORTHO05D008658 1.1e-09 69.7 195 32.8


User provided reference genes

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