Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb059180 Zea mays HOM05D006090 ORTHO05D007600 9.8e-43 176.4 90 100.0
Os02g0749450 Oryza sativa ssp. japonica HOM05D006090 ORTHO05D007600 1.7e-39 165.6 90 91.1
Hma1.2p1_0052F.1_g030080 Hydrangea macrophylla HOM05D006090 ORTHO05D007600 2.4e-33 145.2 90 78.9
Solyc01g005110.3 Solanum lycopersicum HOM05D006090 ORTHO05D007600 3.5e-32 141.4 90 73.3
Sopen01g001130 Solanum pennellii HOM05D006090 ORTHO05D007600 3.5e-32 141.4 90 73.3
CSS0021939 Camellia sinensis var. sinensis HOM05D006090 ORTHO05D007600 4.6e-32 141.0 88 76.1
SalBow6G1264 Salvia bowleyana HOM05D006090 ORTHO05D007600 1.7e-31 139.0 90 72.2
SalBow6G7055 Salvia bowleyana HOM05D006090 ORTHO05D007600 1.7e-31 139.0 90 72.2
Dinv19173 Davidia involucrata HOM05D006090 ORTHO05D007600 3.0e-31 138.3 90 74.4
Oeu051534.1 Olea europaea HOM05D006090 ORTHO05D007600 3.0e-31 138.3 90 72.2
PGR044G2731 Punica granatum HOM05D006090 ORTHO05D007600 3.9e-31 137.9 90 75.6
Nitab4.5_0014260g0010 Nicotiana tabacum HOM05D006090 ORTHO05D007600 5.1e-31 137.5 90 71.1
Manes.06G087700 Manihot esculenta HOM05D006090 ORTHO05D007600 6.6e-31 137.1 90 74.4
Potri.002G245800 Populus trichocarpa HOM05D006090 ORTHO05D007600 6.6e-31 137.1 90 75.6
CAN.G282.104 Capsicum annuum HOM05D006090 ORTHO05D007600 8.6e-31 136.7 90 71.1
ECA248G3406 Erigeron canadensis HOM05D006090 ORTHO05D007600 1.1e-30 136.3 90 70.0
Peaxi162Scf01111g00025 Petunia axillaris HOM05D006090 ORTHO05D007600 1.1e-30 136.3 90 71.1
Prupe.8G199000 Prunus persica HOM05D006090 ORTHO05D007600 1.1e-30 136.3 87 73.6
BraA08t32537Z Brassica rapa HOM05D006090 ORTHO05D007600 1.5e-30 136.0 90 74.4
CDE09G0476 Ceratophyllum demersum HOM05D006090 ORTHO05D007600 1.5e-30 136.0 90 72.2
Hma1.2p1_0226F.1_g095400 Hydrangea macrophylla HOM05D006090 ORTHO05D007600 1.5e-30 136.0 90 74.4
vmacro14732 Vaccinium macrocarpon HOM05D006090 ORTHO05D007600 1.5e-30 136.0 87 74.7
CAN.G151.21 Capsicum annuum HOM05D006090 ORTHO05D007600 1.9e-30 135.6 90 71.1
MBI04_g03342_MAGBIO Magnolia biondii HOM05D006090 ORTHO05D007600 1.9e-30 135.6 90 71.1
Nn8g41078 Nelumbo nucifera HOM05D006090 ORTHO05D007600 2.5e-30 135.2 90 73.3
Nitab4.5_0000521g0090 Nicotiana tabacum HOM05D006090 ORTHO05D007600 2.5e-30 135.2 90 68.9
TWI18G0803 Tripterygium wilfordii HOM05D006090 ORTHO05D007600 2.5e-30 135.2 90 73.3
Migut.N03342 Erythranthe guttata HOM05D006090 ORTHO05D007600 3.3e-30 134.8 90 72.2
GSVIVG01028416001 Vitis vinifera HOM05D006090 ORTHO05D007600 3.3e-30 134.8 88 75.0
HanXRQChr01g0015271 Helianthus annuus HOM05D006090 ORTHO05D007600 4.3e-30 134.4 90 70.0
Rhsim01G0252800 Rhododendron simsii HOM05D006090 ORTHO05D007600 4.3e-30 134.4 90 72.2
BcaB04g17463 Brassica carinata HOM05D006090 ORTHO05D007600 5.6e-30 134.0 90 73.3
MD05G1171700 Malus domestica HOM05D006090 ORTHO05D007600 5.6e-30 134.0 87 74.7
TAR362G1026 Trochodendron aralioides HOM05D006090 ORTHO05D007600 5.6e-30 134.0 90 73.3
Lsat_1_v5_gn_8_5041 Lactuca sativa HOM05D006090 ORTHO05D007600 7.3e-30 133.7 90 70.0
MD10G1159900 Malus domestica HOM05D006090 ORTHO05D007600 7.3e-30 133.7 86 74.4
A08p05190 Brassica napus HOM05D006090 ORTHO05D007600 9.5e-30 133.3 90 73.3
Gohir.A07G199200 Gossypium hirsutum HOM05D006090 ORTHO05D007600 9.5e-30 133.3 90 68.9
Medtr7g056250 Medicago truncatula HOM05D006090 ORTHO05D007600 9.5e-30 133.3 90 70.0
Psat3g148760 Pisum sativum HOM05D006090 ORTHO05D007600 9.5e-30 133.3 90 71.1
BcaC07g37170 Brassica carinata HOM05D006090 ORTHO05D007600 1.2e-29 132.9 90 72.2
C08p05430 Brassica napus HOM05D006090 ORTHO05D007600 1.2e-29 132.9 90 72.2
BolC8t47360H Brassica oleracea HOM05D006090 ORTHO05D007600 1.2e-29 132.9 90 72.2
Thhalv10011899m.g Eutrema salsugineum HOM05D006090 ORTHO05D007600 1.2e-29 132.9 90 72.2
FvH4_2g18550 Fragaria vesca HOM05D006090 ORTHO05D007600 1.2e-29 132.9 87 71.3
FAN15G1212 Fragaria x ananassa HOM05D006090 ORTHO05D007600 1.2e-29 132.9 87 71.3
PSO170G6116 Papaver somniferum HOM05D006090 ORTHO05D007600 1.2e-29 132.9 90 73.3
THA.LOC104802658 Tarenaya hassleriana HOM05D006090 ORTHO05D007600 1.6e-29 132.5 90 70.0
CARHR037780 Cardamine hirsuta HOM05D006090 ORTHO05D007600 2.1e-29 132.1 90 71.1
Cc06_g17130 Coffea canephora HOM05D006090 ORTHO05D007600 2.1e-29 132.1 90 70.0
Thecc.02G015400 Theobroma cacao HOM05D006090 ORTHO05D007600 2.1e-29 132.1 90 71.1
TPR.G6479 Trifolium pratense HOM05D006090 ORTHO05D007600 2.1e-29 132.1 90 67.8
TWI75G0179 Tripterygium wilfordii HOM05D006090 ORTHO05D007600 2.8e-29 131.7 90 73.3
AL1G54720 Arabidopsis lyrata HOM05D006090 ORTHO05D007600 3.6e-29 131.3 90 71.1
PSO445G0009 Papaver somniferum HOM05D006090 ORTHO05D007600 3.6e-29 131.3 90 72.2
Sp1g35110 Schrenkiella parvula HOM05D006090 ORTHO05D007600 3.6e-29 131.3 90 71.1
AT1G48140 Arabidopsis thaliana HOM05D006090 ORTHO05D007600 4.7e-29 131.0 90 71.1
EL10Ac7g17901 Beta vulgaris HOM05D006090 ORTHO05D007600 4.7e-29 131.0 90 70.0
Carub.0001s3724 Capsella rubella HOM05D006090 ORTHO05D007600 4.7e-29 131.0 90 70.0
Gohir.D07G205600 Gossypium hirsutum HOM05D006090 ORTHO05D007600 4.7e-29 131.0 90 66.7
RcHm_v2.0_Chr6g0284111 Rosa chinensis HOM05D006090 ORTHO05D007600 4.7e-29 131.0 87 67.8
Gorai.001G231600 Gossypium raimondii HOM05D006090 ORTHO05D007600 6.2e-29 130.6 90 66.7
CANSAT21G0941 Cannabis sativa HOM05D006090 ORTHO05D007600 8.1e-29 130.2 87 72.4
TWI36G1609 Tripterygium wilfordii HOM05D006090 ORTHO05D007600 8.1e-29 130.2 88 72.7
Eucgr.A02241 Eucalyptus grandis HOM05D006090 ORTHO05D007600 1.1e-28 129.8 90 71.1
Lsat_1_v5_gn_5_180801 Lactuca sativa HOM05D006090 ORTHO05D007600 1.1e-28 129.8 84 71.4
Atru.chr6.1016 Acer truncatum HOM05D006090 ORTHO05D007600 1.4e-28 129.4 89 67.4
CiPaw.01G050400 Carya illinoinensis HOM05D006090 ORTHO05D007600 1.4e-28 129.4 90 72.2
QL09p032732 Quercus lobata HOM05D006090 ORTHO05D007600 2.3e-28 128.6 86 74.4
Sp3g06170 Schrenkiella parvula HOM05D006090 ORTHO05D007600 3.1e-28 128.3 88 68.2
Aa31LG10G5590 Aethionema arabicum HOM05D006090 ORTHO05D007600 4.0e-28 127.9 97 66.0
Glyma.08G349000 Glycine max HOM05D006090 ORTHO05D007600 4.0e-28 127.9 90 67.8
Ca_06547_v3 Cicer arietinum L. HOM05D006090 ORTHO05D007600 5.2e-28 127.5 90 65.6
Aa31LG5G17800 Aethionema arabicum HOM05D006090 ORTHO05D007600 6.8e-28 127.1 90 64.4
Phvul.002G080700 Phaseolus vulgaris HOM05D006090 ORTHO05D007600 6.8e-28 127.1 86 69.8
QL02p097583 Quercus lobata HOM05D006090 ORTHO05D007600 6.8e-28 127.1 86 73.3
Sed0025432 Sechium edule HOM05D006090 ORTHO05D007600 6.8e-28 127.1 90 67.8
ClCG10G009020 Citrullus lanatus HOM05D006090 ORTHO05D007600 1.2e-27 126.3 90 65.6
Thecc.01G220300 Theobroma cacao HOM05D006090 ORTHO05D007600 1.2e-27 126.3 87 67.8
Duzib211G0047 Durio zibethinus HOM05D006090 ORTHO05D007600 2.0e-27 125.6 90 66.7
Duzib211G0371 Durio zibethinus HOM05D006090 ORTHO05D007600 2.0e-27 125.6 90 66.7
Lalb_Chr03g0041481 Lupinus albus HOM05D006090 ORTHO05D007600 2.0e-27 125.6 88 65.9
HPP92_023706 Vanilla planifolia HOM05D006090 ORTHO05D007600 2.0e-27 125.6 87 69.0
Lj1g0010865 Lotus japonicus HOM05D006090 ORTHO05D007600 3.4e-27 124.8 88 67.0
Lj5g0019908 Lotus japonicus HOM05D006090 ORTHO05D007600 3.4e-27 124.8 88 67.0
BcaB04g21317 Brassica carinata HOM05D006090 ORTHO05D007600 9.9e-27 123.2 88 62.5
FAN24G0022 Fragaria x ananassa HOM05D006090 ORTHO05D007600 1.3e-26 122.9 100 61.0
BcaC08g43006 Brassica carinata HOM05D006090 ORTHO05D007600 2.2e-26 122.1 91 65.9
C06p02550 Brassica napus HOM05D006090 ORTHO05D007600 2.2e-26 122.1 91 65.9
PGR004G1711 Punica granatum HOM05D006090 ORTHO05D007600 2.2e-26 122.1 89 68.5
PGSC0003DMG400022770 Solanum tuberosum HOM05D006090 ORTHO05D007600 2.2e-26 122.1 124 52.4
unitig_8.g4837 Utricularia gibba HOM05D006090 ORTHO05D007600 3.7e-26 121.3 90 64.4
Sed0016973 Sechium edule HOM05D006090 ORTHO05D007600 6.4e-26 120.6 86 65.1
Phvul.002G081100 Phaseolus vulgaris HOM05D006090 ORTHO05D007600 8.3e-26 120.2 84 69.0
BolC6t35383H Brassica oleracea HOM05D006090 ORTHO05D007600 2.4e-25 118.6 91 64.8
BNapus_Darmor_BZH_scaffold_109p00180 Brassica napus HOM05D006090 ORTHO05D007600 4.1e-25 117.9 88 62.5
BcaB07g33788 Brassica carinata HOM05D006090 ORTHO05D007600 7.1e-25 117.1 94 63.8
Cpa.g.sc71.6 Carica papaya HOM05D006090 ORTHO05D007600 4.6e-24 114.4 84 69.0
Ciclev10023078m.g Citrus clementina HOM05D006090 ORTHO05D007600 1.7e-23 112.5 72 69.4
Haze_03967 Corylus avellana HOM05D006090 ORTHO05D007600 1.7e-23 112.5 97 60.8
arahy.Tifrunner.gnm1.ann1.7I8V6Q Arachis hypogaea HOM05D006090 ORTHO05D007600 1.6e-21 105.9 86 61.6
arahy.Tifrunner.gnm1.ann1.NKLH1V Arachis hypogaea HOM05D006090 ORTHO05D007600 2.1e-21 105.5 86 60.5
Medtr3g437420 Medicago truncatula HOM05D006090 ORTHO05D007600 8.1e-21 103.6 70 67.1
Actinidia30052 Actinidia chinensis HOM05D006090 ORTHO05D007600 1.4e-20 102.8 63 74.6
Duzib138G1257 Durio zibethinus HOM05D006090 ORTHO05D007600 1.8e-20 102.4 69 68.1
CDE02G0014 Ceratophyllum demersum HOM05D006090 ORTHO05D007600 4.0e-20 101.3 69 68.1
MELO3C026729.2 Cucumis melo HOM05D006090 ORTHO05D007600 4.0e-20 101.3 70 68.6
Cpa.g.sc428.3 Carica papaya HOM05D006090 ORTHO05D007600 6.8e-20 100.5 70 68.6
Mapoly0057s0028 Marchantia polymorpha HOM05D006090 ORTHO05D007600 6.8e-20 100.5 93 53.8
Phvul.009G016400 Phaseolus vulgaris HOM05D006090 ORTHO05D007600 5.8e-19 97.4 66 69.7
Rhsim13G0047700 Rhododendron simsii HOM05D006090 ORTHO05D007600 7.6e-19 97.1 71 70.4
Lj2C1126T3 Lonicera japonica HOM05D006090 ORTHO05D007600 1.3e-18 96.3 61 73.8
Eucgr.K03282 Eucalyptus grandis HOM05D006090 ORTHO05D007600 1.7e-18 95.9 57 80.7
BraA01t04392Z Brassica rapa HOM05D006090 ORTHO05D007600 1.1e-17 93.2 68 66.2
Glyma.18G167500 Glycine max HOM05D006090 ORTHO05D007600 9.2e-17 90.1 58 74.1
Sabra02G0187100 Salix brachista HOM05D006090 ORTHO05D007600 1.2e-16 89.7 74 59.5
AagrBONN_evm.TU.Sc2ySwM_228.829 Anthoceros agrestis HOM05D006090 ORTHO05D007600 3.9e-15 84.7 89 47.2
TAR633G0277 Trochodendron aralioides HOM05D006090 ORTHO05D007600 6.6e-15 84.0 52 78.8
CiPaw.02G023500 Carya illinoinensis HOM05D006090 ORTHO05D007600 1.5e-14 82.8 80 58.8
Haze_15253 Corylus avellana HOM05D006090 ORTHO05D007600 2.5e-14 82.0 77 58.4
Pp3c20_9690 Physcomitrium patens HOM05D006090 ORTHO05D007600 2.5e-14 82.0 93 43.0
Nitab4.5_0001873g0080 Nicotiana tabacum HOM05D006090 ORTHO05D007600 3.2e-09 65.1 47 66.0
arahy.Tifrunner.gnm1.ann1.L6G805 Arachis hypogaea HOM05D006090 ORTHO05D007600 4.2e-09 64.7 53 62.3
Aa31LG11G3540 Aethionema arabicum HOM05D006090 ORTHO05D007600 2.5e-06 55.5 33 69.7
Pp3c15_25421 Physcomitrium patens HOM05D006090 ORTHO05D007600 7.3e-06 53.9 81 35.8


User provided reference genes

Program Settings