Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb057090 Zea mays HOM05D005574 ORTHO05D007102 1.1e-210 736.5 400 100.0
Os03g0747100 Oryza sativa ssp. japonica HOM05D005574 ORTHO05D007102 4.9e-126 455.3 367 67.0
HPP92_009613 Vanilla planifolia HOM05D005574 ORTHO05D007102 4.1e-48 196.4 323 38.4
CiPaw.02G098000 Carya illinoinensis HOM05D005574 ORTHO05D007102 1.4e-45 188.0 326 37.7
Nn6g34090 Nelumbo nucifera HOM05D005574 ORTHO05D007102 1.4e-45 188.0 318 36.8
PSO210G4004 Papaver somniferum HOM05D005574 ORTHO05D007102 1.9e-45 187.6 319 37.6
QL06p002087 Quercus lobata HOM05D005574 ORTHO05D007102 5.5e-45 186.0 325 36.0
Prupe.1G015700 Prunus persica HOM05D005574 ORTHO05D007102 1.2e-44 184.9 317 37.5
TAR362G0087 Trochodendron aralioides HOM05D005574 ORTHO05D007102 1.0e-43 181.8 316 36.7
GSVIVG01017997001 Vitis vinifera HOM05D005574 ORTHO05D007102 1.8e-43 181.0 321 36.8
Manes.03G177100 Manihot esculenta HOM05D005574 ORTHO05D007102 5.2e-43 179.5 309 37.9
Thecc.04G192400 Theobroma cacao HOM05D005574 ORTHO05D007102 1.5e-42 177.9 322 36.0
Dinv44545 Davidia involucrata HOM05D005574 ORTHO05D007102 5.7e-42 176.0 322 35.1
Haze_00883 Corylus avellana HOM05D005574 ORTHO05D007102 9.7e-42 175.3 321 35.2
Glyma.10G247300 Glycine max HOM05D005574 ORTHO05D007102 1.3e-41 174.9 319 36.1
TWI53G0495 Tripterygium wilfordii HOM05D005574 ORTHO05D007102 1.3e-41 174.9 322 36.0
Cfa015664 Carpinus fangiana HOM05D005574 ORTHO05D007102 1.7e-41 174.5 321 35.8
Glyma.20G147200 Glycine max HOM05D005574 ORTHO05D007102 2.2e-41 174.1 318 36.5
CANSAT78G2217 Cannabis sativa HOM05D005574 ORTHO05D007102 3.7e-41 173.3 319 35.4
MD16G1195700 Malus domestica HOM05D005574 ORTHO05D007102 1.1e-40 171.8 306 36.6
Rhsim04G0201500 Rhododendron simsii HOM05D005574 ORTHO05D007102 1.1e-40 171.8 326 34.7
Potri.010G086100 Populus trichocarpa HOM05D005574 ORTHO05D007102 1.8e-40 171.0 306 34.6
TPR.G5479 Trifolium pratense HOM05D005574 ORTHO05D007102 1.8e-40 171.0 309 35.6
Ciclev10005241m.g Citrus clementina HOM05D005574 ORTHO05D007102 2.4e-40 170.6 313 34.2
Sabra10G0057600 Salix brachista HOM05D005574 ORTHO05D007102 2.4e-40 170.6 306 34.3
Duzib268G0255 Durio zibethinus HOM05D005574 ORTHO05D007102 4.1e-40 169.9 313 34.8
Psat6g206920 Pisum sativum HOM05D005574 ORTHO05D007102 4.1e-40 169.9 314 36.3
CsaV3_3G013190 Cucumis sativus L. HOM05D005574 ORTHO05D007102 5.3e-40 169.5 323 35.6
Atru.chr4.2447 Acer truncatum HOM05D005574 ORTHO05D007102 7.0e-40 169.1 314 35.4
Sed0027704 Sechium edule HOM05D005574 ORTHO05D007102 5.9e-39 166.0 315 35.6
VMungo0720G0566 Vigna mungo HOM05D005574 ORTHO05D007102 5.9e-39 166.0 319 36.1
Aqoxy2G03411 Aquilegia oxysepala HOM05D005574 ORTHO05D007102 1.3e-38 164.9 331 33.8
MD13G1194900 Malus domestica HOM05D005574 ORTHO05D007102 1.3e-38 164.9 323 34.1
Actinidia23520 Actinidia chinensis HOM05D005574 ORTHO05D007102 1.7e-38 164.5 323 34.7
ClCG05G005090 Citrullus lanatus HOM05D005574 ORTHO05D007102 1.7e-38 164.5 323 35.3
MELO3C006525.2 Cucumis melo HOM05D005574 ORTHO05D007102 1.7e-38 164.5 319 35.4
Phvul.007G058100 Phaseolus vulgaris HOM05D005574 ORTHO05D007102 3.8e-38 163.3 316 34.5
Ca_10888_v3 Cicer arietinum L. HOM05D005574 ORTHO05D007102 5.0e-38 162.9 311 34.1
FAN07G2976 Fragaria x ananassa HOM05D005574 ORTHO05D007102 5.0e-38 162.9 311 34.7
Lj5g0023935 Lotus japonicus HOM05D005574 ORTHO05D007102 5.0e-38 162.9 325 35.4
RcHm_v2.0_Chr4g0415861 Rosa chinensis HOM05D005574 ORTHO05D007102 5.0e-38 162.9 319 34.5
PSO761G0453 Papaver somniferum HOM05D005574 ORTHO05D007102 6.5e-38 162.5 302 34.4
CSS0019466 Camellia sinensis var. sinensis HOM05D005574 ORTHO05D007102 1.1e-37 161.8 317 33.1
COL.COLO4_05700 Corchorus olitorius HOM05D005574 ORTHO05D007102 1.1e-37 161.8 319 32.0
Medtr1g103560 Medicago truncatula HOM05D005574 ORTHO05D007102 1.1e-37 161.8 312 34.0
arahy.Tifrunner.gnm1.ann1.PUQJ4X Arachis hypogaea HOM05D005574 ORTHO05D007102 2.5e-37 160.6 323 35.3
CDE07G0532 Ceratophyllum demersum HOM05D005574 ORTHO05D007102 3.2e-37 160.2 322 35.1
FvH4_4g16270 Fragaria vesca HOM05D005574 ORTHO05D007102 4.2e-37 159.8 313 35.1
FAN12G0525 Fragaria x ananassa HOM05D005574 ORTHO05D007102 7.2e-37 159.1 313 34.8
FAN12G2145 Fragaria x ananassa HOM05D005574 ORTHO05D007102 7.2e-37 159.1 313 34.8
FAN12G2997 Fragaria x ananassa HOM05D005574 ORTHO05D007102 7.2e-37 159.1 313 34.8
arahy.Tifrunner.gnm1.ann1.R5YE9W Arachis hypogaea HOM05D005574 ORTHO05D007102 9.4e-37 158.7 323 35.0
Peaxi162Scf00092g00614 Petunia axillaris HOM05D005574 ORTHO05D007102 1.2e-36 158.3 311 34.1
FAN02G2947 Fragaria x ananassa HOM05D005574 ORTHO05D007102 1.6e-36 157.9 312 32.7
Hma1.2p1_0602F.1_g187410 Hydrangea macrophylla HOM05D005574 ORTHO05D007102 1.6e-36 157.9 315 35.6
Sed0003604 Sechium edule HOM05D005574 ORTHO05D007102 2.7e-36 157.1 320 34.7
Solyc09g082180.3 Solanum lycopersicum HOM05D005574 ORTHO05D007102 3.6e-36 156.8 315 31.7
Migut.G00347 Erythranthe guttata HOM05D005574 ORTHO05D007102 4.7e-36 156.4 316 34.8
Nitab4.5_0001920g0060 Nicotiana tabacum HOM05D005574 ORTHO05D007102 4.7e-36 156.4 308 32.8
Sopen09g031060 Solanum pennellii HOM05D005574 ORTHO05D007102 6.1e-36 156.0 321 31.5
ATR0697G187 Amborella trichopoda HOM05D005574 ORTHO05D007102 8.8e-35 152.1 340 33.5
Nitab4.5_0004135g0020 Nicotiana tabacum HOM05D005574 ORTHO05D007102 2.0e-34 151.0 321 30.8
Gorai.011G151700 Gossypium raimondii HOM05D005574 ORTHO05D007102 2.6e-34 150.6 321 30.8
Dinv14005 Davidia involucrata HOM05D005574 ORTHO05D007102 3.3e-34 150.2 312 34.6
Sc19g0004060 Simmondsia chinensis HOM05D005574 ORTHO05D007102 4.4e-34 149.8 325 33.8
MSTRG.9977 Avicennia marina HOM05D005574 ORTHO05D007102 7.5e-34 149.1 305 32.8
Gohir.D10G136700 Gossypium hirsutum HOM05D005574 ORTHO05D007102 1.7e-33 147.9 320 31.9
MSTRG.4036 Avicennia marina HOM05D005574 ORTHO05D007102 2.2e-33 147.5 345 31.6
Cc03_g03930 Coffea canephora HOM05D005574 ORTHO05D007102 3.7e-33 146.7 306 34.3
Sp1g04310 Schrenkiella parvula HOM05D005574 ORTHO05D007102 1.4e-32 144.8 325 29.2
Gohir.A10G129500 Gossypium hirsutum HOM05D005574 ORTHO05D007102 3.1e-32 143.7 320 30.0
SGA_v2.0_scaffold257G45710 Striga asiatica HOM05D005574 ORTHO05D007102 5.3e-32 142.9 303 32.0
DCAR_030644 Daucus carota HOM05D005574 ORTHO05D007102 1.2e-31 141.7 308 32.5
Lalb_Chr02g0140631 Lupinus albus HOM05D005574 ORTHO05D007102 1.2e-31 141.7 312 33.3
BraA10t42684Z Brassica rapa HOM05D005574 ORTHO05D007102 1.6e-31 141.4 315 29.2
Hund12118 Selenicereus undatus HOM05D005574 ORTHO05D007102 2.7e-31 140.6 319 31.0
BcaC05g24386 Brassica carinata HOM05D005574 ORTHO05D007102 4.5e-31 139.8 321 30.8
A10p04140 Brassica napus HOM05D005574 ORTHO05D007102 4.5e-31 139.8 315 29.2
C05p03780 Brassica napus HOM05D005574 ORTHO05D007102 4.5e-31 139.8 321 30.8
BolC5t29155H Brassica oleracea HOM05D005574 ORTHO05D007102 4.5e-31 139.8 321 30.8
BcaB02g06860 Brassica carinata HOM05D005574 ORTHO05D007102 1.3e-30 138.3 322 31.4
Aa31LG1G19200 Aethionema arabicum HOM05D005574 ORTHO05D007102 1.7e-30 137.9 298 30.9
MBI15_g31435_MAGBIO Magnolia biondii HOM05D005574 ORTHO05D007102 2.2e-30 137.5 249 37.3
THA.LOC104800960 Tarenaya hassleriana HOM05D005574 ORTHO05D007102 3.8e-30 136.7 325 31.1
AUR62034712 Chenopodium quinoa HOM05D005574 ORTHO05D007102 6.5e-30 136.0 320 30.9
Oeu058969.1 Olea europaea HOM05D005574 ORTHO05D007102 6.5e-30 136.0 316 30.1
EL10Ac3g06494 Beta vulgaris HOM05D005574 ORTHO05D007102 1.1e-29 135.2 330 29.7
Duzib151G0572 Durio zibethinus HOM05D005574 ORTHO05D007102 1.5e-29 134.8 175 37.7
SalBow2G1029 Salvia bowleyana HOM05D005574 ORTHO05D007102 5.5e-29 132.9 303 30.0
AL1G15280 Arabidopsis lyrata HOM05D005574 ORTHO05D007102 7.2e-29 132.5 333 30.0
AUR62033680 Chenopodium quinoa HOM05D005574 ORTHO05D007102 9.4e-29 132.1 298 32.9
Eucgr.B01081 Eucalyptus grandis HOM05D005574 ORTHO05D007102 1.2e-28 131.7 310 33.5
Ah.13g071610 Amaranthus hybridus HOM05D005574 ORTHO05D007102 2.1e-28 131.0 317 31.2
Thhalv10002568m.g Eutrema salsugineum HOM05D005574 ORTHO05D007102 3.0e-27 127.1 317 25.9
SMO174G0025 Selaginella moellendorffii HOM05D005574 ORTHO05D007102 8.8e-27 125.6 317 29.3
Carub.0001s0477 Capsella rubella HOM05D005574 ORTHO05D007102 1.5e-26 124.8 324 29.6
CAN.G2204.2 Capsicum annuum HOM05D000340 ORTHO05D007102 4.4e-26 123.2 157 40.1
Lsat_1_v5_gn_5_104360 Lactuca sativa HOM05D005574 ORTHO05D007102 5.7e-26 122.9 336 29.2
CARHR004930 Cardamine hirsuta HOM05D005574 ORTHO05D007102 9.8e-26 122.1 316 27.8
PGR142G0953 Punica granatum HOM05D005574 ORTHO05D007102 1.3e-25 121.7 335 29.9
SEGI_38250 Sequoiadendron giganteum HOM05D005574 ORTHO05D007102 6.3e-25 119.4 318 28.6
ECA234G0493 Erigeron canadensis HOM05D005574 ORTHO05D007102 7.7e-23 112.5 315 29.5
HanXRQChr10g0294751 Helianthus annuus HOM05D005574 ORTHO05D007102 1.3e-22 111.7 320 29.1
Actinidia40140 Actinidia chinensis HOM05D005574 ORTHO05D007102 2.2e-22 110.9 141 42.6
CDE06G2673 Ceratophyllum demersum HOM05D005574 ORTHO05D007102 3.8e-22 110.2 246 32.9
Potri.008G154400 Populus trichocarpa HOM05D005574 ORTHO05D007102 3.8e-22 110.2 243 30.5
CAN.G2204.4 Capsicum annuum HOM05D005574 ORTHO05D007102 8.5e-22 109.0 122 42.6
AT1G05440 Arabidopsis thaliana HOM05D005574 ORTHO05D007102 4.2e-21 106.7 221 31.2
AagrBONN_evm.TU.Sc2ySwM_117.3111 Anthoceros agrestis HOM05D005574 ORTHO05D007102 2.0e-18 97.8 271 29.2
Cpa.g.sc58.90 Carica papaya HOM05D005574 ORTHO05D007102 4.4e-18 96.7 106 42.5
ECA234G4095 Erigeron canadensis HOM05D005574 ORTHO05D007102 1.1e-16 92.0 201 30.8
C01p35960 Brassica napus HOM05D005574 ORTHO05D007102 7.0e-16 89.4 150 34.0
BolC1t04542H Brassica oleracea HOM05D005574 ORTHO05D007102 7.0e-16 89.4 150 34.0
unitig_32.g11728 Utricularia gibba HOM05D005574 ORTHO05D007102 9.2e-16 89.0 337 27.6
BolC5t33236H Brassica oleracea HOM05D005574 ORTHO05D007102 1.6e-15 88.2 141 34.8
C03p05690 Brassica napus HOM05D005574 ORTHO05D022054 3.3e-13 80.5 104 41.3
BolC1t03554H Brassica oleracea HOM05D005574 ORTHO05D022054 5.6e-13 79.7 89 43.8
BcaC07g42131 Brassica carinata HOM05D005574 ORTHO05D007102 4.1e-08 63.5 87 35.6
C08p51720 Brassica napus HOM05D005574 ORTHO05D007102 4.1e-08 63.5 87 35.6
A09p67440 Brassica napus HOM05D005574 ORTHO05D007102 7.0e-08 62.8 87 34.5
BcaC09g49493 Brassica carinata HOM05D005574 ORTHO05D007102 1.6e-07 61.6 122 32.8
A02p27770 Brassica napus HOM05D005574 ORTHO05D007102 3.5e-07 60.5 102 32.4
BraA02t07818Z Brassica rapa HOM05D005574 ORTHO05D007102 3.5e-07 60.5 102 32.4
BraA07t27929Z Brassica rapa HOM05D005574 ORTHO05D007102 3.5e-07 60.5 102 32.4
BolC3t13081H Brassica oleracea HOM05D005574 ORTHO05D007102 5.9e-07 59.7 101 32.7
A03p47670 Brassica napus HOM05D005574 ORTHO05D007102 3.9e-06 57.0 101 32.7
BraA09t37853Z Brassica rapa HOM05D005574 ORTHO05D007102 3.9e-06 57.0 101 32.7
BraA09t41109Z Brassica rapa HOM05D005574 ORTHO05D007102 5.0e-06 56.6 82 37.8


User provided reference genes

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