Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb053310 Zea mays HOM05D006132 ORTHO05D007305 1.0e-151 540.0 270 100.0
Psat0s3156g0040 Pisum sativum HOM05D006132 ORTHO05D007305 6.1e-48 195.3 257 44.7
GSVIVG01035326001 Vitis vinifera HOM05D006132 ORTHO05D007305 2.3e-47 193.4 280 44.6
Phvul.009G112700 Phaseolus vulgaris HOM05D006132 ORTHO05D007305 3.0e-47 193.0 262 44.7
Glyma.06G088900 Glycine max HOM05D006132 ORTHO05D007305 1.5e-46 190.7 262 44.3
Medtr3g110417 Medicago truncatula HOM05D006132 ORTHO05D007305 2.0e-46 190.3 240 46.2
arahy.Tifrunner.gnm1.ann1.GM174E Arachis hypogaea HOM05D006132 ORTHO05D007305 7.5e-46 188.3 252 46.0
Ca_15565_v3 Cicer arietinum L. HOM05D006132 ORTHO05D007305 7.5e-46 188.3 265 43.8
Duzib168G1248 Durio zibethinus HOM05D006132 ORTHO05D007305 9.8e-46 188.0 248 46.4
Glyma.04G087200 Glycine max HOM05D006132 ORTHO05D007305 9.8e-46 188.0 262 43.5
Lj1g0008631 Lotus japonicus HOM05D006132 ORTHO05D007305 9.8e-46 188.0 264 44.7
Nn8g39007 Nelumbo nucifera HOM05D006132 ORTHO05D007305 9.8e-46 188.0 272 44.1
Prupe.1G443500 Prunus persica HOM05D006132 ORTHO05D007305 1.7e-45 187.2 264 45.5
VMungo1309G3161 Vigna mungo HOM05D006132 ORTHO05D007305 1.7e-45 187.2 262 44.7
TPR.G12374 Trifolium pratense HOM05D006132 ORTHO05D007305 2.2e-45 186.8 264 44.3
CiPaw.07G201400 Carya illinoinensis HOM05D006132 ORTHO05D007305 1.4e-44 184.1 277 44.4
ClCG11G015000 Citrullus lanatus HOM05D006132 ORTHO05D007305 1.4e-44 184.1 268 41.8
Dinv23402 Davidia involucrata HOM05D006132 ORTHO05D007305 1.8e-44 183.7 246 45.9
TAR636G1718 Trochodendron aralioides HOM05D006132 ORTHO05D007305 1.8e-44 183.7 299 41.5
Dinv02537 Davidia involucrata HOM05D006132 ORTHO05D007305 2.4e-44 183.3 246 45.9
MBI01_g01249_MAGBIO Magnolia biondii HOM05D006132 ORTHO05D007305 3.1e-44 183.0 303 38.9
Atru.chr7.2044 Acer truncatum HOM05D006132 ORTHO05D007305 5.4e-44 182.2 248 46.4
SGA_v2.0_scaffold103G30057 Striga asiatica HOM05D006132 ORTHO05D007305 5.4e-44 182.2 254 42.9
Lalb_Chr08g0242871 Lupinus albus HOM05D006132 ORTHO05D007305 7.0e-44 181.8 242 47.1
arahy.Tifrunner.gnm1.ann1.XPLI6K Arachis hypogaea HOM05D006132 ORTHO05D007305 9.1e-44 181.4 269 43.9
Hund19486 Selenicereus undatus HOM05D006132 ORTHO05D007305 1.6e-43 180.6 267 42.7
Haze_01967 Corylus avellana HOM05D006132 ORTHO05D007305 2.0e-43 180.3 274 42.3
QL12p040855 Quercus lobata HOM05D006132 ORTHO05D007305 4.5e-43 179.1 277 43.7
Migut.A00170 Erythranthe guttata HOM05D006132 ORTHO05D007305 5.9e-43 178.7 263 42.6
CsaV3_3G048410 Cucumis sativus L. HOM05D006132 ORTHO05D007305 1.0e-42 177.9 244 43.4
Sed0028022 Sechium edule HOM05D006132 ORTHO05D007305 1.3e-42 177.6 270 41.5
HPP92_019594 Vanilla planifolia HOM05D006132 ORTHO05D007305 1.3e-42 177.6 285 43.2
MD08G1108900 Malus domestica HOM05D006132 ORTHO05D007305 1.7e-42 177.2 268 43.3
Thecc.09G049200 Theobroma cacao HOM05D006132 ORTHO05D007305 1.7e-42 177.2 249 45.4
vmacro00180 Vaccinium macrocarpon HOM05D006132 ORTHO05D007305 1.7e-42 177.2 265 44.5
MELO3C003478.2 Cucumis melo HOM05D006132 ORTHO05D007305 3.8e-42 176.0 239 43.9
Ciclev10010526m.g Citrus clementina HOM05D006132 ORTHO05D007305 6.6e-42 175.3 235 46.8
PSO210G2191 Papaver somniferum HOM05D006132 ORTHO05D007305 6.6e-42 175.3 293 41.6
Potri.018G057900 Populus trichocarpa HOM05D006132 ORTHO05D007305 6.6e-42 175.3 256 44.5
Cc08_g10020 Coffea canephora HOM05D006132 ORTHO05D007305 1.5e-41 174.1 243 42.8
Manes.03G057600 Manihot esculenta HOM05D006132 ORTHO05D007305 1.5e-41 174.1 259 44.4
Aqoxy7G03955 Aquilegia oxysepala HOM05D006132 ORTHO05D007305 1.9e-41 173.7 292 40.4
Gohir.A07G022180 Gossypium hirsutum HOM05D006132 ORTHO05D007305 2.5e-41 173.3 244 45.9
DCAR_007699 Daucus carota HOM05D006132 ORTHO05D007305 3.3e-41 172.9 243 42.8
Gohir.D07G023900 Gossypium hirsutum HOM05D006132 ORTHO05D007305 4.2e-41 172.6 265 43.8
PSO210G7354 Papaver somniferum HOM05D006132 ORTHO05D007305 4.2e-41 172.6 291 41.6
TWI34G0160 Tripterygium wilfordii HOM05D006132 ORTHO05D007305 1.2e-40 171.0 237 42.2
Gorai.001G024600 Gossypium raimondii HOM05D006132 ORTHO05D007305 2.1e-40 170.2 265 43.4
MSTRG.25925 Avicennia marina HOM05D006132 ORTHO05D007305 3.6e-40 169.5 262 42.4
RcHm_v2.0_Chr6g0306811 Rosa chinensis HOM05D006132 ORTHO05D007305 3.6e-40 169.5 271 42.4
Sc09g0009530 Simmondsia chinensis HOM05D006132 ORTHO05D007305 4.7e-40 169.1 246 43.5
Rhsim11G0049000 Rhododendron simsii HOM05D006132 ORTHO05D007305 6.1e-40 168.7 259 45.2
THA.LOC104818581 Tarenaya hassleriana HOM05D006132 ORTHO05D007305 1.0e-39 167.9 258 43.0
Carub.0007s0767 Capsella rubella HOM05D006132 ORTHO05D007305 1.5e-38 164.1 238 42.4
BraA01t00520Z Brassica rapa HOM05D006132 ORTHO05D007305 2.0e-38 163.7 240 42.9
A01p05470 Brassica napus HOM05D006132 ORTHO05D007305 3.4e-38 162.9 246 41.9
FAN20G0110 Fragaria x ananassa HOM05D006132 ORTHO05D007305 4.4e-38 162.5 268 42.5
Nitab4.5_0002021g0060 Nicotiana tabacum HOM05D006132 ORTHO05D007305 5.7e-38 162.2 268 40.3
AL7G18910 Arabidopsis lyrata HOM05D006132 ORTHO05D007305 7.5e-38 161.8 237 43.0
FvH4_2g35140 Fragaria vesca HOM05D006132 ORTHO05D007305 9.8e-38 161.4 272 41.5
BcaC09g52078 Brassica carinata HOM05D006132 ORTHO05D007305 1.3e-37 161.0 240 43.3
C01p06070 Brassica napus HOM05D006132 ORTHO05D007305 1.3e-37 161.0 240 43.3
BolC1t00600H Brassica oleracea HOM05D006132 ORTHO05D007305 1.7e-37 160.6 240 43.3
Lj8C561G12 Lonicera japonica HOM05D006132 ORTHO05D007305 1.7e-37 160.6 243 42.8
Sp7g30590 Schrenkiella parvula HOM05D006132 ORTHO05D007305 2.9e-37 159.8 242 42.1
PGR031G1631 Punica granatum HOM05D006132 ORTHO05D007305 3.7e-37 159.5 241 43.2
Nitab4.5_0000318g0080 Nicotiana tabacum HOM05D006132 ORTHO05D007305 6.4e-37 158.7 269 39.8
AT4G32820 Arabidopsis thaliana HOM05D006132 ORTHO05D007305 1.1e-36 157.9 273 39.2
Aa31sc208G40 Aethionema arabicum HOM05D006132 ORTHO05D007305 1.8e-36 157.1 239 41.4
SalBow4G1475 Salvia bowleyana HOM05D006132 ORTHO05D007305 1.8e-36 157.1 242 41.3
Aa31LG5G17300 Aethionema arabicum HOM05D006132 ORTHO05D007305 4.1e-36 156.0 239 41.4
COL.COLO4_21010 Corchorus olitorius HOM05D006132 ORTHO05D007305 4.1e-36 156.0 269 40.5
Oeu038827.1 Olea europaea HOM05D006132 ORTHO05D007305 4.1e-36 156.0 250 42.0
Solyc08g066010.2 Solanum lycopersicum HOM05D006132 ORTHO05D007305 4.1e-36 156.0 247 40.1
ATR0815G026 Amborella trichopoda HOM05D006132 ORTHO05D007305 5.4e-36 155.6 261 42.5
EL10Ac2g03960 Beta vulgaris HOM05D006132 ORTHO05D007305 4.6e-35 152.5 264 39.4
Sopen08g019670 Solanum pennellii HOM05D006132 ORTHO05D007305 4.6e-35 152.5 253 39.1
unitig_0.g2566 Utricularia gibba HOM05D006132 ORTHO05D007305 1.7e-34 150.6 237 43.9
AUR62040212 Chenopodium quinoa HOM05D006132 ORTHO05D007305 2.3e-34 150.2 248 39.9
SHI18802 Sapria himalayana HOM05D006132 ORTHO05D007305 5.0e-34 149.1 265 41.9
Lsat_1_v5_gn_3_109020 Lactuca sativa HOM05D006132 ORTHO05D007305 6.6e-34 148.7 265 40.0
Thhalv10026823m.g Eutrema salsugineum HOM05D006132 ORTHO05D007305 1.1e-33 147.9 258 42.2
CAN.G9.6 Capsicum annuum HOM05D006132 ORTHO05D007305 4.3e-33 146.0 248 39.9
AUR62009214 Chenopodium quinoa HOM05D006132 ORTHO05D007305 2.8e-32 143.3 248 39.9
Eucgr.C00619 Eucalyptus grandis HOM05D006132 ORTHO05D007305 1.4e-31 141.0 238 40.8
ECA240G1625 Erigeron canadensis HOM05D006132 ORTHO05D007305 3.4e-30 136.3 236 38.6
HanXRQChr03g0077991 Helianthus annuus HOM05D006132 ORTHO05D007305 7.5e-30 135.2 238 40.8
TAR636G2276 Trochodendron aralioides HOM05D006132 ORTHO05D007305 2.9e-29 133.3 112 60.7
Ah.11g044450 Amaranthus hybridus HOM05D006132 ORTHO05D007305 4.1e-28 129.4 237 37.1
Actinidia01213 Actinidia chinensis HOM05D006132 ORTHO05D007305 2.1e-16 90.5 238 33.2
SMO365G0056 Selaginella moellendorffii HOM05D006132 ORTHO05D007305 2.6e-14 83.6 243 33.3
Mapoly0021s0014 Marchantia polymorpha HOM05D006132 ORTHO05D007305 1.3e-13 81.3 318 26.4
Pp3c4_1880 Physcomitrium patens HOM05D006132 ORTHO05D007305 1.7e-13 80.9 330 27.3
AagrBONN_evm.TU.Sc2ySwM_344.875 Anthoceros agrestis HOM05D006132 ORTHO05D007305 7.1e-12 75.5 128 36.7
SMO351G0355 Selaginella moellendorffii HOM05D023170 ORTHO05D007305 1.2e-06 58.2 71 49.3


User provided reference genes

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