Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb052260 Zea mays HOM05D006571 ORTHO05D007771 2.7e-96 355.9 267 100.0
Zm00001eb217610 Zea mays HOM05D006571 ORTHO05D007771 5.8e-67 258.5 299 64.9
Os03g0668900 Oryza sativa ssp. japonica HOM05D006571 ORTHO05D007771 2.3e-47 193.4 268 67.2
Zm00001eb205800 Zea mays HOM05D006571 ORTHO05D007771 7.7e-43 178.3 142 71.1
Zm00001eb386610 Zea mays HOM05D006571 ORTHO05D007771 5.7e-30 135.6 95 76.8
Oeu023993.1 Olea europaea HOM05D006571 ORTHO05D007771 4.8e-29 132.5 167 48.5
AUR62003170 Chenopodium quinoa HOM05D006571 ORTHO05D007771 1.4e-28 131.0 168 48.2
Lj4g0016878 Lotus japonicus HOM05D006571 ORTHO05D007771 1.4e-28 131.0 167 47.3
Sc03g0000790 Simmondsia chinensis HOM05D006571 ORTHO05D007771 1.4e-28 131.0 167 48.5
TPR.G34976 Trifolium pratense HOM05D006571 ORTHO05D007771 2.4e-28 130.2 167 47.9
TAR376G1222 Trochodendron aralioides HOM05D006571 ORTHO05D007771 2.4e-28 130.2 168 47.0
Lj2P450T8 Lonicera japonica HOM05D006571 ORTHO05D007771 3.1e-28 129.8 165 46.7
CAN.G1028.5 Capsicum annuum HOM05D006571 ORTHO05D007771 4.1e-28 129.4 168 47.6
Glyma.02G057800 Glycine max HOM05D006571 ORTHO05D007771 4.1e-28 129.4 167 47.9
Glyma.16G140800 Glycine max HOM05D006571 ORTHO05D007771 5.3e-28 129.0 166 48.2
Potri.005G124700 Populus trichocarpa HOM05D006571 ORTHO05D007771 5.3e-28 129.0 167 47.3
Sabra05G0102400 Salix brachista HOM05D006571 ORTHO05D007771 7.0e-28 128.6 167 47.3
CARHR160190 Cardamine hirsuta HOM05D006571 ORTHO05D007771 1.2e-27 127.9 167 47.9
Nitab4.5_0001466g0040 Nicotiana tabacum HOM05D006571 ORTHO05D007771 1.2e-27 127.9 168 46.4
PGR102G1801 Punica granatum HOM05D006571 ORTHO05D007771 1.2e-27 127.9 191 49.2
Solyc03g034080.4 Solanum lycopersicum HOM05D006571 ORTHO05D007771 1.2e-27 127.9 170 46.5
Ca_22257_v3 Cicer arietinum L. HOM05D006571 ORTHO05D007771 1.6e-27 127.5 167 47.3
Manes.02G092300 Manihot esculenta HOM05D006571 ORTHO05D007771 1.6e-27 127.5 167 47.9
Phvul.003G252700 Phaseolus vulgaris HOM05D006571 ORTHO05D007771 1.6e-27 127.5 191 48.7
PGSC0003DMG400017777 Solanum tuberosum HOM05D006571 ORTHO05D007771 1.6e-27 127.5 168 46.4
Thecc.01G037900 Theobroma cacao HOM05D006571 ORTHO05D007771 1.6e-27 127.5 167 47.3
Aa31LG4G18850 Aethionema arabicum HOM05D006571 ORTHO05D007771 2.0e-27 127.1 163 48.5
MD02G1150500 Malus domestica HOM05D006571 ORTHO05D007771 2.0e-27 127.1 167 47.3
Medtr8g077860 Medicago truncatula HOM05D006571 ORTHO05D007771 2.0e-27 127.1 166 47.6
Sopen03g006860 Solanum pennellii HOM05D006571 ORTHO05D007771 2.0e-27 127.1 168 46.4
VMungo0251G2973 Vigna mungo HOM05D006571 ORTHO05D007771 2.0e-27 127.1 191 48.7
CiPaw.01G036100 Carya illinoinensis HOM05D006571 ORTHO05D007771 2.6e-27 126.7 167 46.7
Psat4g091960 Pisum sativum HOM05D006571 ORTHO05D007771 3.5e-27 126.3 165 46.7
Carub.0005s1702 Capsella rubella HOM05D006571 ORTHO05D007771 4.5e-27 125.9 163 48.5
Zm00001eb327200 Zea mays HOM05D006571 ORTHO05D007771 4.5e-27 125.9 164 47.6
CiPaw.02G016100 Carya illinoinensis HOM05D006571 ORTHO05D007771 5.9e-27 125.6 167 47.3
HanXRQChr16g0530131 Helianthus annuus HOM05D006571 ORTHO05D007771 5.9e-27 125.6 167 45.5
Oeu044138.1 Olea europaea HOM05D006571 ORTHO05D007771 7.7e-27 125.2 165 46.1
arahy.Tifrunner.gnm1.ann1.J8IV3X Arachis hypogaea HOM05D006571 ORTHO05D007771 1.0e-26 124.8 167 46.1
arahy.Tifrunner.gnm1.ann1.P9WABM Arachis hypogaea HOM05D006571 ORTHO05D007771 1.0e-26 124.8 167 46.1
Haze_15108 Corylus avellana HOM05D006571 ORTHO05D007771 1.0e-26 124.8 165 47.3
MD15G1265000 Malus domestica HOM05D006571 ORTHO05D007771 1.3e-26 124.4 165 47.3
Oeu024877.2 Olea europaea HOM05D006571 ORTHO05D007771 1.3e-26 124.4 168 45.2
Peaxi162Scf00751g00044 Petunia axillaris HOM05D006571 ORTHO05D007771 1.3e-26 124.4 167 46.1
Sabra07G0024000 Salix brachista HOM05D006571 ORTHO05D007771 1.3e-26 124.4 168 47.6
Duzib147G0515 Durio zibethinus HOM05D006571 ORTHO05D007771 1.7e-26 124.0 167 46.1
Gohir.A11G185200 Gossypium hirsutum HOM05D006571 ORTHO05D007771 1.7e-26 124.0 166 47.0
Potri.007G027500 Populus trichocarpa HOM05D006571 ORTHO05D007771 1.7e-26 124.0 168 47.6
Gohir.D11G191700 Gossypium hirsutum HOM05D006571 ORTHO05D007771 2.2e-26 123.6 166 46.4
THA.LOC104807447 Tarenaya hassleriana HOM05D006571 ORTHO05D007771 2.2e-26 123.6 168 46.4
MBI16_g37746_MAGBIO Magnolia biondii HOM05D006571 ORTHO05D007771 2.9e-26 123.2 163 46.6
Duzib264G0679 Durio zibethinus HOM05D006571 ORTHO05D007771 3.8e-26 122.9 161 47.8
Gohir.D03G015600 Gossypium hirsutum HOM05D006571 ORTHO05D007771 3.8e-26 122.9 161 47.2
Gorai.003G015800 Gossypium raimondii HOM05D006571 ORTHO05D007771 3.8e-26 122.9 161 47.2
PSO170G0995 Papaver somniferum HOM05D006571 ORTHO05D007771 3.8e-26 122.9 170 45.9
Gorai.007G204400 Gossypium raimondii HOM05D006571 ORTHO05D007771 5.0e-26 122.5 165 46.7
SalBow5G2751 Salvia bowleyana HOM05D006571 ORTHO05D007771 5.0e-26 122.5 167 45.5
ATR0733G171 Amborella trichopoda HOM05D006571 ORTHO05D007771 8.5e-26 121.7 166 46.4
Duzib187G0259 Durio zibethinus HOM05D006571 ORTHO05D007771 8.5e-26 121.7 163 46.6
CANSAT01G0415 Cannabis sativa HOM05D006571 ORTHO05D007771 1.1e-25 121.3 163 45.4
Nn1g05052 Nelumbo nucifera HOM05D006571 ORTHO05D007771 1.1e-25 121.3 154 48.1
ECA246G1775 Erigeron canadensis HOM05D006571 ORTHO05D007771 1.5e-25 120.9 167 44.9
RcHm_v2.0_Chr2g0101911 Rosa chinensis HOM05D006571 ORTHO05D007771 1.5e-25 120.9 162 46.9
TWI53G0501 Tripterygium wilfordii HOM05D006571 ORTHO05D007771 1.5e-25 120.9 163 44.8
GSVIVG01031937001 Vitis vinifera HOM05D006571 ORTHO05D007771 1.5e-25 120.9 162 46.9
EL10Ac6g14930 Beta vulgaris HOM05D006571 ORTHO05D007771 1.9e-25 120.6 167 45.5
Cc07_g09340 Coffea canephora HOM05D006571 ORTHO05D007771 1.9e-25 120.6 162 46.3
Prupe.7G152600 Prunus persica HOM05D006571 ORTHO05D007771 1.9e-25 120.6 161 47.2
QL06p045652 Quercus lobata HOM05D006571 ORTHO05D007771 1.9e-25 120.6 161 46.6
AL5G30850 Arabidopsis lyrata HOM05D006571 ORTHO05D007771 2.5e-25 120.2 163 46.0
CDE04G1022 Ceratophyllum demersum HOM05D006571 ORTHO05D007771 2.5e-25 120.2 163 46.6
Lalb_Chr16g0377891 Lupinus albus HOM05D006571 ORTHO05D007771 3.2e-25 119.8 166 44.6
AT3G50690 Arabidopsis thaliana HOM05D006571 ORTHO05D007771 5.5e-25 119.0 163 46.0
COL.COLO4_22100 Corchorus olitorius HOM05D006571 ORTHO05D007771 5.5e-25 119.0 159 46.5
FvH4_1g13531 Fragaria vesca HOM05D006571 ORTHO05D007771 5.5e-25 119.0 162 45.7
FAN26G3136 Fragaria x ananassa HOM05D006571 ORTHO05D007771 5.5e-25 119.0 162 45.7
Gohir.A02G164500 Gossypium hirsutum HOM05D006571 ORTHO05D007771 5.5e-25 119.0 161 46.6
Zm00001eb426950 Zea mays HOM05D022938 ORTHO05D007771 5.5e-25 119.0 118 64.4
Thhalv10025306m.g Eutrema salsugineum HOM05D006571 ORTHO05D007771 7.2e-25 118.6 163 44.8
CDE07G0561 Ceratophyllum demersum HOM05D006571 ORTHO05D007771 9.4e-25 118.2 162 46.3
Manes.01G133900 Manihot esculenta HOM05D006571 ORTHO05D007771 9.4e-25 118.2 161 46.0
Migut.L00283 Erythranthe guttata HOM05D006571 ORTHO05D007771 1.2e-24 117.9 166 45.2
Lalb_Chr09g0322511 Lupinus albus HOM05D006571 ORTHO05D007771 1.2e-24 117.9 163 46.0
Hma1.2p1_0400F.1_g144570 Hydrangea macrophylla HOM05D006571 ORTHO05D007771 1.6e-24 117.5 162 44.4
Actinidia36549 Actinidia chinensis HOM05D006571 ORTHO05D007771 2.1e-24 117.1 161 46.6
A01p02240 Brassica napus HOM05D006571 ORTHO05D007771 2.1e-24 117.1 167 44.3
FAN23G2572 Fragaria x ananassa HOM05D006571 ORTHO05D007771 2.1e-24 117.1 161 46.0
PSO764G0269 Papaver somniferum HOM05D006571 ORTHO05D007771 2.7e-24 116.7 170 44.1
Pp3c2_24900 Physcomitrium patens HOM05D006571 ORTHO05D007771 3.6e-24 116.3 168 42.3
Pp3c2_24950 Physcomitrium patens HOM05D006571 ORTHO05D007771 3.6e-24 116.3 168 42.3
GSVIVG01018984001 Vitis vinifera HOM05D006571 ORTHO05D007771 3.6e-24 116.3 161 45.3
Atru.chr3.554 Acer truncatum HOM05D006571 ORTHO05D007771 4.7e-24 115.9 154 47.4
BcaNung00714 Brassica carinata HOM05D006571 ORTHO05D007771 4.7e-24 115.9 167 43.7
C01p02460 Brassica napus HOM05D006571 ORTHO05D007771 4.7e-24 115.9 167 43.7
BolC1t00234H Brassica oleracea HOM05D006571 ORTHO05D007771 4.7e-24 115.9 167 43.7
Hma1.2p1_0066F.1_g036610 Hydrangea macrophylla HOM05D006571 ORTHO05D007771 4.7e-24 115.9 162 45.1
SGA_v2.0_scaffold402G50988 Striga asiatica HOM05D006571 ORTHO05D007771 4.7e-24 115.9 166 44.0
BraA01t00212Z Brassica rapa HOM05D006571 ORTHO05D007771 6.1e-24 115.5 167 43.7
BcaNung04428 Brassica carinata HOM05D006571 ORTHO05D007771 8.0e-24 115.2 167 44.3
Mapoly0013s0183 Marchantia polymorpha HOM05D006571 ORTHO05D007771 1.0e-23 114.8 166 42.2
SMO144G0154 Selaginella moellendorffii HOM05D006571 ORTHO05D007771 1.0e-23 114.8 165 43.0
TWI09G0338 Tripterygium wilfordii HOM05D006571 ORTHO05D007771 1.0e-23 114.8 157 45.2
Aqoxy6G01074 Aquilegia oxysepala HOM05D006571 ORTHO05D007771 2.3e-23 113.6 167 43.7
Actinidia12116 Actinidia chinensis HOM05D006571 ORTHO05D007771 8.8e-23 111.7 159 44.0
CSS0027902 Camellia sinensis var. sinensis HOM05D006571 ORTHO05D007771 8.8e-23 111.7 162 43.2
Hund14147 Selenicereus undatus HOM05D006571 ORTHO05D007771 1.1e-22 111.3 157 44.6
THA.LOC104804229 Tarenaya hassleriana HOM05D006571 ORTHO05D007771 2.6e-22 110.2 190 41.1
Pp3c1_12220 Physcomitrium patens HOM05D006571 ORTHO05D007771 1.3e-21 107.8 170 39.4
Pp3c1_12230 Physcomitrium patens HOM05D006571 ORTHO05D007771 1.3e-21 107.8 170 39.4
TAR628G0135 Trochodendron aralioides HOM05D006571 ORTHO05D007771 1.8e-20 104.0 149 45.0
Dinv26822 Davidia involucrata HOM05D006571 ORTHO05D007771 2.4e-20 103.6 153 42.5
AUR62007988 Chenopodium quinoa HOM05D006571 ORTHO05D007771 7.0e-20 102.1 93 57.0
Zm00001eb297010 Zea mays HOM05D022938 ORTHO05D007771 1.0e-18 98.2 58 94.8
Zm00001eb297020 Zea mays HOM05D022938 ORTHO05D007771 1.0e-18 98.2 58 94.8
Lj9A368T57 Lonicera japonica HOM05D006571 ORTHO05D007771 8.0e-16 88.6 170 37.6
Zm00001eb188300 Zea mays HOM05D022938 ORTHO05D007771 1.8e-15 87.4 58 86.2
Zm00001eb167400 Zea mays HOM05D022938 ORTHO05D007771 1.3e-13 81.3 58 81.0
Oeu000712.1 Olea europaea HOM05D006571 ORTHO05D007771 3.7e-13 79.7 63 60.3
SEGI_17530 Sequoiadendron giganteum HOM05D006571 ORTHO05D007771 7.2e-09 65.5 162 35.2
Cre08.g363700 Chlamydomonas reinhardtii HOM05D006571 ORTHO05D007771 1.0e-07 61.6 91 42.9


User provided reference genes

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