Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb049770 Zea mays HOM05D007442 ORTHO05D009284 6.3e-64 247.3 126 100.0
Os03g0595300 Oryza sativa ssp. japonica HOM05D007442 ORTHO05D009284 8.1e-35 150.6 122 69.7
Nn1g07499 Nelumbo nucifera HOM05D007442 ORTHO05D009284 1.3e-32 143.3 82 84.1
Manes.12G065601 Manihot esculenta HOM05D007442 ORTHO05D009284 8.4e-32 140.6 70 95.7
Thhalv10002726m.g Eutrema salsugineum HOM05D007442 ORTHO05D009284 1.9e-31 139.4 90 76.7
Atru.BG.34.p Acer truncatum HOM05D007442 ORTHO05D009284 9.2e-31 137.1 68 92.6
Gohir.A07G191900 Gossypium hirsutum HOM05D007442 ORTHO05D009284 1.2e-30 136.7 112 66.1
Gohir.D07G198200 Gossypium hirsutum HOM05D007442 ORTHO05D009284 1.2e-30 136.7 119 64.7
Gorai.001G221800 Gossypium raimondii HOM05D007442 ORTHO05D009284 1.2e-30 136.7 119 64.7
Potri.014G167300 Populus trichocarpa HOM05D007442 ORTHO05D009284 1.2e-30 136.7 70 91.4
TWI18G1416 Tripterygium wilfordii HOM05D007442 ORTHO05D009284 1.2e-30 136.7 80 85.0
Thecc.01G195900 Theobroma cacao HOM05D007442 ORTHO05D009284 1.6e-30 136.3 122 65.6
CsaV3_6G009590 Cucumis sativus L. HOM05D007442 ORTHO05D009284 2.1e-30 136.0 86 79.1
Eucgr.H00878 Eucalyptus grandis HOM05D007442 ORTHO05D009284 2.1e-30 136.0 87 74.7
GSVIVG01030083001 Vitis vinifera HOM05D007442 ORTHO05D009284 2.1e-30 136.0 77 85.7
Sabra14G0127300 Salix brachista HOM05D007442 ORTHO05D009284 3.5e-30 135.2 70 90.0
THA.LOC104826628 Tarenaya hassleriana HOM05D007442 ORTHO05D009284 3.5e-30 135.2 116 64.7
BcaC06g35915 Brassica carinata HOM05D007442 ORTHO05D009284 4.6e-30 134.8 78 84.6
C05p43360 Brassica napus HOM05D007442 ORTHO05D009284 4.6e-30 134.8 78 84.6
BolC7t41415H Brassica oleracea HOM05D007442 ORTHO05D009284 4.6e-30 134.8 78 84.6
BraA07t28440Z Brassica rapa HOM05D007442 ORTHO05D009284 4.6e-30 134.8 86 75.6
Carub.0003s2673 Capsella rubella HOM05D007442 ORTHO05D009284 4.6e-30 134.8 82 80.5
BcaB06g26827 Brassica carinata HOM05D007442 ORTHO05D009284 6.0e-30 134.4 70 90.0
SGA_v2.0_scaffold49G18406 Striga asiatica HOM05D007442 ORTHO05D009284 6.0e-30 134.4 70 90.0
Dinv26606 Davidia involucrata HOM05D007442 ORTHO05D009284 7.8e-30 134.0 88 76.1
AL3G42820 Arabidopsis lyrata HOM05D007442 ORTHO05D009284 1.0e-29 133.7 78 83.3
AT4G13500 Arabidopsis thaliana HOM05D007442 ORTHO05D009284 1.0e-29 133.7 78 83.3
Dinv21296 Davidia involucrata HOM05D007442 ORTHO05D009284 1.0e-29 133.7 78 83.3
FAN05G2406 Fragaria x ananassa HOM05D007442 ORTHO05D009284 1.0e-29 133.7 70 90.0
Oeu064352.1 Olea europaea HOM05D007442 ORTHO05D009284 1.0e-29 133.7 70 90.0
Phvul.008G289000 Phaseolus vulgaris HOM05D007442 ORTHO05D009284 1.0e-29 133.7 92 75.0
ClCG02G009230 Citrullus lanatus HOM05D007442 ORTHO05D009284 1.3e-29 133.3 82 80.5
Sp3g23760 Schrenkiella parvula HOM05D007442 ORTHO05D009284 1.3e-29 133.3 78 83.3
Lsat_1_v5_gn_7_96821 Lactuca sativa HOM05D007442 ORTHO05D009284 1.7e-29 132.9 86 76.7
TWI36G1704 Tripterygium wilfordii HOM05D007442 ORTHO05D009284 1.7e-29 132.9 78 83.3
VMungo0647G0872 Vigna mungo HOM05D007442 ORTHO05D009284 1.7e-29 132.9 92 75.0
Duzib138G0628 Durio zibethinus HOM05D007442 ORTHO05D009284 2.3e-29 132.5 113 63.7
Prupe.3G197600 Prunus persica HOM05D007442 ORTHO05D009284 2.3e-29 132.5 117 59.8
Sc06g0009910 Simmondsia chinensis HOM05D007442 ORTHO05D009284 2.3e-29 132.5 121 62.8
Cc00_g11580 Coffea canephora HOM05D007442 ORTHO05D009284 3.0e-29 132.1 101 69.3
QL04p068504 Quercus lobata HOM05D007442 ORTHO05D009284 3.0e-29 132.1 69 85.5
Lj8A135T99 Lonicera japonica HOM05D007442 ORTHO05D009284 3.9e-29 131.7 88 72.7
CSS0032520 Camellia sinensis var. sinensis HOM05D007442 ORTHO05D009284 5.1e-29 131.3 89 74.2
FvH4_6g40630 Fragaria vesca HOM05D007442 ORTHO05D009284 5.1e-29 131.3 70 88.6
FAN02G0623 Fragaria x ananassa HOM05D007442 ORTHO05D009284 5.1e-29 131.3 70 88.6
FAN14G4407 Fragaria x ananassa HOM05D007442 ORTHO05D009284 5.1e-29 131.3 70 88.6
PGSC0003DMG400018833 Solanum tuberosum HOM05D007442 ORTHO05D009284 5.1e-29 131.3 79 79.7
C07p09770 Brassica napus HOM05D007442 ORTHO05D009284 6.6e-29 131.0 78 83.3
PGR083G2291 Punica granatum HOM05D007442 ORTHO05D009284 6.6e-29 131.0 79 83.5
MD17G1116900 Malus domestica HOM05D007442 ORTHO05D009284 8.6e-29 130.6 71 88.7
Sed0005163 Sechium edule HOM05D007442 ORTHO05D009284 8.6e-29 130.6 138 58.0
arahy.Tifrunner.gnm1.ann1.8YE7LP Arachis hypogaea HOM05D007442 ORTHO05D009284 1.1e-28 130.2 78 83.3
arahy.Tifrunner.gnm1.ann1.C8HW3T Arachis hypogaea HOM05D007442 ORTHO05D009284 1.1e-28 130.2 78 83.3
CANSAT80G0988 Cannabis sativa HOM05D007442 ORTHO05D009284 1.1e-28 130.2 82 75.6
Ciclev10017197m.g Citrus clementina HOM05D007442 ORTHO05D009284 1.1e-28 130.2 78 78.2
RcHm_v2.0_Chr2g0156001 Rosa chinensis HOM05D007442 ORTHO05D009284 1.1e-28 130.2 77 81.8
Sed0010901 Sechium edule HOM05D007442 ORTHO05D009284 1.5e-28 129.8 70 87.1
unitig_62.g23255 Utricularia gibba HOM05D007442 ORTHO05D009284 1.5e-28 129.8 127 59.8
Nitab4.5_0000006g0670 Nicotiana tabacum HOM05D007442 ORTHO05D009284 1.9e-28 129.4 77 84.4
FAN09G1668 Fragaria x ananassa HOM05D007442 ORTHO05D009284 2.5e-28 129.0 70 87.1
Glyma.02G308900 Glycine max HOM05D007442 ORTHO05D009284 2.5e-28 129.0 127 59.1
Nitab4.5_0002154g0020 Nicotiana tabacum HOM05D007442 ORTHO05D009284 2.5e-28 129.0 77 83.1
Peaxi162Scf00147g01918 Petunia axillaris HOM05D007442 ORTHO05D009284 3.3e-28 128.6 77 81.8
CiPaw.03G281600 Carya illinoinensis HOM05D007442 ORTHO05D009284 4.3e-28 128.3 111 58.6
MD09G1126600 Malus domestica HOM05D007442 ORTHO05D009284 4.3e-28 128.3 71 87.3
PSO210G6456 Papaver somniferum HOM05D007442 ORTHO05D009284 4.3e-28 128.3 78 80.8
Solyc05g024430.3 Solanum lycopersicum HOM05D007442 ORTHO05D009284 4.3e-28 128.3 89 73.0
TPR.G35906 Trifolium pratense HOM05D007442 ORTHO05D009284 4.3e-28 128.3 90 74.4
MSTRG.12248 Avicennia marina HOM05D007442 ORTHO05D009284 5.6e-28 127.9 82 76.8
LjContig00081g0000923 Lotus japonicus HOM05D007442 ORTHO05D009284 5.6e-28 127.9 109 63.3
PSO302G0215 Papaver somniferum HOM05D007442 ORTHO05D009284 5.6e-28 127.9 79 79.7
Sopen05g019430 Solanum pennellii HOM05D007442 ORTHO05D009284 5.6e-28 127.9 77 81.8
Actinidia35204 Actinidia chinensis HOM05D007442 ORTHO05D009284 7.3e-28 127.5 113 62.8
Cfa014227 Carpinus fangiana HOM05D007442 ORTHO05D009284 7.3e-28 127.5 77 77.9
Medtr5g098530 Medicago truncatula HOM05D007442 ORTHO05D009284 1.2e-27 126.7 83 74.7
Psat2g002440 Pisum sativum HOM05D007442 ORTHO05D009284 2.1e-27 125.9 69 87.0
Haze_12630 Corylus avellana HOM05D007442 ORTHO05D009284 3.6e-27 125.2 65 86.2
Duzib211G0040 Durio zibethinus HOM05D007442 ORTHO05D009284 3.6e-27 125.2 123 59.3
TAR629G1602 Trochodendron aralioides HOM05D007442 ORTHO05D009284 3.6e-27 125.2 65 87.7
EL10Ac9g22680 Beta vulgaris HOM05D007442 ORTHO05D009284 4.7e-27 124.8 75 78.7
ECA236G2600 Erigeron canadensis HOM05D007442 ORTHO05D009284 1.1e-26 123.6 78 76.9
Migut.H01284 Erythranthe guttata HOM05D007442 ORTHO05D009284 2.4e-26 122.5 66 86.4
Aa31LG5G16680 Aethionema arabicum HOM05D001040 ORTHO05D002795 4.0e-26 121.7 90 70.0
HanXRQChr11g0329011 Helianthus annuus HOM05D007442 ORTHO05D009284 6.8e-26 120.9 123 54.5
DCAR_021093 Daucus carota HOM05D007442 ORTHO05D009284 1.5e-25 119.8 83 73.5
Lalb_Chr04g0247091 Lupinus albus HOM05D007442 ORTHO05D009284 2.9e-24 115.5 79 72.2
SEGI_21691 Sequoiadendron giganteum HOM05D007442 ORTHO05D009284 3.8e-24 115.2 79 72.2
SMO364G0127 Selaginella moellendorffii HOM05D007442 ORTHO05D009284 1.2e-22 110.2 69 73.9
CDE04G1945 Ceratophyllum demersum HOM05D007442 ORTHO05D009284 1.6e-22 109.8 70 77.1
Glyma.14G004000 Glycine max HOM05D007442 ORTHO05D009284 2.7e-22 109.0 92 66.3
vmacro09481 Vaccinium macrocarpon HOM05D007442 ORTHO05D009284 6.0e-22 107.8 133 45.9
Mapoly0072s0101 Marchantia polymorpha HOM05D007442 ORTHO05D009284 1.0e-21 107.1 69 69.6
MBI16_g07768_MAGBIO Magnolia biondii HOM05D007442 ORTHO05D009284 1.3e-19 100.1 48 95.8
CARHR103090 Cardamine hirsuta HOM05D007442 ORTHO05D009284 2.8e-19 99.0 49 91.8
Pp3c21_15030 Physcomitrium patens HOM05D007442 ORTHO05D009284 1.9e-15 86.3 57 64.9
Rhsim04G0028000 Rhododendron simsii HOM05D000264 ORTHO05D009284 5.4e-15 84.7 56 67.9
AagrBONN_evm.TU.Sc2ySwM_368.44 Anthoceros agrestis HOM05D007442 ORTHO05D009284 2.1e-14 82.8 52 69.2
Cre03.g151200 Chlamydomonas reinhardtii HOM05D007442 ORTHO05D009284 1.5e-09 66.6 81 43.2


User provided reference genes

Program Settings