Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb049190 Zea mays HOM05D006424 ORTHO05D007945 4.8e-146 521.2 268 100.0
Zm00001eb219530 Zea mays HOM05D006424 ORTHO05D007945 2.6e-131 472.2 270 86.3
Os03g0586500 Oryza sativa ssp. japonica HOM05D006424 ORTHO05D007945 1.8e-108 396.4 274 75.9
CSS0015595 Camellia sinensis var. sinensis HOM05D006424 ORTHO05D007945 3.8e-90 335.5 209 71.8
TAR383G1051 Trochodendron aralioides HOM05D006424 ORTHO05D007945 1.9e-89 333.2 215 71.2
Nn2g12084 Nelumbo nucifera HOM05D006424 ORTHO05D007945 2.4e-89 332.8 209 72.7
Rhsim12G0191200 Rhododendron simsii HOM05D006424 ORTHO05D007945 4.2e-89 332.0 216 69.4
DCAR_021344 Daucus carota HOM05D006424 ORTHO05D007945 2.1e-88 329.7 205 73.7
Nn8g39504 Nelumbo nucifera HOM05D006424 ORTHO05D007945 2.7e-88 329.3 206 72.8
ClCG09G002940 Citrullus lanatus HOM05D006424 ORTHO05D007945 4.6e-88 328.6 209 69.9
Cc04_g04390 Coffea canephora HOM05D006424 ORTHO05D007945 6.0e-88 328.2 205 70.7
Actinidia08796 Actinidia chinensis HOM05D006424 ORTHO05D007945 1.0e-87 327.4 209 69.9
Actinidia15982 Actinidia chinensis HOM05D006424 ORTHO05D007945 1.0e-87 327.4 205 69.8
MELO3C023426.2 Cucumis melo HOM05D006424 ORTHO05D007945 1.0e-87 327.4 207 70.5
GSVIVG01017340001 Vitis vinifera HOM05D006424 ORTHO05D007945 1.0e-87 327.4 265 60.8
CSS0035863 Camellia sinensis var. sinensis HOM05D006424 ORTHO05D007945 1.7e-87 326.6 221 67.9
Nitab4.5_0009497g0010 Nicotiana tabacum HOM05D006424 ORTHO05D007945 1.7e-87 326.6 209 71.8
Hma1.2p1_0042F.1_g025600 Hydrangea macrophylla HOM05D006424 ORTHO05D007945 2.3e-87 326.2 217 68.2
Lj9A500T81 Lonicera japonica HOM05D006424 ORTHO05D007945 3.0e-87 325.9 204 70.1
Sed0012965 Sechium edule HOM05D006424 ORTHO05D007945 6.6e-87 324.7 209 69.4
vmacro16897 Vaccinium macrocarpon HOM05D006424 ORTHO05D007945 8.7e-87 324.3 206 69.9
Duzib192G0907 Durio zibethinus HOM05D006424 ORTHO05D007945 1.1e-86 323.9 209 69.4
Peaxi162Scf00034g01413 Petunia axillaris HOM05D006424 ORTHO05D007945 1.1e-86 323.9 217 70.5
CsaV3_7G032330 Cucumis sativus L. HOM05D006424 ORTHO05D007945 1.5e-86 323.6 207 68.1
Migut.I00764 Erythranthe guttata HOM05D006424 ORTHO05D007945 2.5e-86 322.8 203 71.4
MBI04_g29330_MAGBIO Magnolia biondii HOM05D006424 ORTHO05D007945 2.5e-86 322.8 211 68.7
COL.COLO4_11949 Corchorus olitorius HOM05D006424 ORTHO05D007945 7.3e-86 321.2 211 67.3
Gohir.A06G185600 Gossypium hirsutum HOM05D006424 ORTHO05D007945 7.3e-86 321.2 209 68.9
Gohir.D06G192200 Gossypium hirsutum HOM05D006424 ORTHO05D007945 9.6e-86 320.9 209 68.4
PGR102G1391 Punica granatum HOM05D006424 ORTHO05D007945 1.3e-85 320.5 209 69.9
Ah.01g020600 Amaranthus hybridus HOM05D006424 ORTHO05D007945 1.6e-85 320.1 205 70.7
Cpa.g.sc10.267 Carica papaya HOM05D006424 ORTHO05D007945 1.6e-85 320.1 209 67.5
AUR62016338 Chenopodium quinoa HOM05D006424 ORTHO05D007945 1.6e-85 320.1 211 69.7
Manes.11G056800 Manihot esculenta HOM05D006424 ORTHO05D007945 1.6e-85 320.1 205 70.7
Aqoxy7G03662 Aquilegia oxysepala HOM05D006424 ORTHO05D007945 2.8e-85 319.3 206 68.4
Gorai.010G225400 Gossypium raimondii HOM05D006424 ORTHO05D007945 2.8e-85 319.3 209 67.9
ATR0322G065 Amborella trichopoda HOM05D006424 ORTHO05D007945 4.8e-85 318.5 212 65.6
Lalb_Chr04g0262371 Lupinus albus HOM05D006424 ORTHO05D007945 6.2e-85 318.2 203 69.0
PSO210G3245 Papaver somniferum HOM05D006424 ORTHO05D007945 6.2e-85 318.2 211 68.2
Thecc.06G024200 Theobroma cacao HOM05D006424 ORTHO05D007945 6.2e-85 318.2 211 67.8
Oeu039429.1 Olea europaea HOM05D006424 ORTHO05D007945 8.1e-85 317.8 205 71.7
Eucgr.F03876 Eucalyptus grandis HOM05D006424 ORTHO05D007945 1.1e-84 317.4 207 69.1
HanXRQChr04g0097881 Helianthus annuus HOM05D006424 ORTHO05D007945 1.4e-84 317.0 217 66.8
MSTRG.22746 Avicennia marina HOM05D006424 ORTHO05D007945 1.8e-84 316.6 197 71.1
Manes.04G112700 Manihot esculenta HOM05D006424 ORTHO05D007945 1.8e-84 316.6 204 70.6
Lsat_1_v5_gn_1_34401 Lactuca sativa HOM05D006424 ORTHO05D007945 3.1e-84 315.8 203 69.5
PSO210G5365 Papaver somniferum HOM05D006424 ORTHO05D007945 3.1e-84 315.8 211 67.8
THA.LOC104810510 Tarenaya hassleriana HOM05D006424 ORTHO05D007945 3.1e-84 315.8 209 69.4
CAN.G47.13 Capsicum annuum HOM05D006424 ORTHO05D007945 4.0e-84 315.5 205 70.2
PGSC0003DMG402028626 Solanum tuberosum HOM05D006424 ORTHO05D007945 4.0e-84 315.5 209 68.4
QL05p029818 Quercus lobata HOM05D006424 ORTHO05D007945 6.9e-84 314.7 209 66.0
Cfa001961 Carpinus fangiana HOM05D006424 ORTHO05D007945 9.0e-84 314.3 207 68.6
BcaC01g03854 Brassica carinata HOM05D006424 ORTHO05D007945 1.2e-83 313.9 206 69.4
A03p39490 Brassica napus HOM05D006424 ORTHO05D007945 1.2e-83 313.9 210 68.1
CANSAT56G3050 Cannabis sativa HOM05D006424 ORTHO05D007945 1.5e-83 313.5 207 68.1
AUR62011520 Chenopodium quinoa HOM05D006424 ORTHO05D007945 1.5e-83 313.5 205 69.8
Potri.001G204300 Populus trichocarpa HOM05D006424 ORTHO05D007945 1.5e-83 313.5 205 68.3
BcaB06g25691 Brassica carinata HOM05D006424 ORTHO05D007945 2.6e-83 312.8 210 68.1
VMungo0331G1912 Vigna mungo HOM05D006424 ORTHO05D007945 2.6e-83 312.8 215 64.7
C03p47890 Brassica napus HOM05D006424 ORTHO05D007945 3.4e-83 312.4 210 68.1
BcaC05g28929 Brassica carinata HOM05D006424 ORTHO05D007945 4.5e-83 312.0 210 68.1
A05p33570 Brassica napus HOM05D006424 ORTHO05D007945 4.5e-83 312.0 210 68.1
C05p50560 Brassica napus HOM05D006424 ORTHO05D007945 4.5e-83 312.0 210 68.1
BolC5t33801H Brassica oleracea HOM05D006424 ORTHO05D007945 4.5e-83 312.0 210 68.1
Sopen12g021950 Solanum pennellii HOM05D006424 ORTHO05D007945 7.6e-83 311.2 205 68.8
TWI12G0141 Tripterygium wilfordii HOM05D006424 ORTHO05D007945 7.6e-83 311.2 218 65.6
Solyc12g042770.3 Solanum lycopersicum HOM05D006424 ORTHO05D007945 9.9e-83 310.8 205 68.8
Lj3g0018478 Lotus japonicus HOM05D006424 ORTHO05D007945 1.3e-82 310.5 203 68.0
Sp3g14150 Schrenkiella parvula HOM05D006424 ORTHO05D007945 2.2e-82 309.7 211 65.9
Glyma.08G213000 Glycine max HOM05D006424 ORTHO05D007945 2.9e-82 309.3 203 68.5
Medtr4g010140 Medicago truncatula HOM05D006424 ORTHO05D007945 2.9e-82 309.3 203 67.5
CARHR090930 Cardamine hirsuta HOM05D006424 ORTHO05D007945 3.8e-82 308.9 210 66.7
Phvul.010G156300 Phaseolus vulgaris HOM05D006424 ORTHO05D007945 3.8e-82 308.9 203 66.5
Prupe.3G087300 Prunus persica HOM05D006424 ORTHO05D007945 3.8e-82 308.9 207 65.7
ECA247G2617 Erigeron canadensis HOM05D006424 ORTHO05D007945 6.4e-82 308.1 205 66.3
Aa31LG8G3030 Aethionema arabicum HOM05D006424 ORTHO05D007945 8.4e-82 307.8 210 66.2
Ca_20445_v3 Cicer arietinum L. HOM05D006424 ORTHO05D007945 1.1e-81 307.4 215 65.6
BraA03t13099Z Brassica rapa HOM05D006424 ORTHO05D007945 1.4e-81 307.0 210 67.1
unitig_27.g24949 Utricularia gibba HOM05D006424 ORTHO05D007945 1.4e-81 307.0 211 66.4
Sabra01G0157400 Salix brachista HOM05D006424 ORTHO05D007945 1.9e-81 306.6 202 67.8
Glyma.07G029900 Glycine max HOM05D006424 ORTHO05D007945 2.4e-81 306.2 201 67.7
AT3G15840 Arabidopsis thaliana HOM05D006424 ORTHO05D007945 3.2e-81 305.8 210 66.7
CDE07G1654 Ceratophyllum demersum HOM05D006424 ORTHO05D007945 3.2e-81 305.8 201 69.2
Thhalv10022443m.g Eutrema salsugineum HOM05D006424 ORTHO05D007945 3.2e-81 305.8 209 67.5
TPR.G38617 Trifolium pratense HOM05D001630 ORTHO05D007945 4.2e-81 305.4 200 68.0
BraA05t22180Z Brassica rapa HOM05D006424 ORTHO05D007945 5.4e-81 305.1 210 67.1
RcHm_v2.0_Chr2g0135411 Rosa chinensis HOM05D006424 ORTHO05D007945 5.4e-81 305.1 208 64.4
Carub.0003s1558 Capsella rubella HOM05D006424 ORTHO05D007945 7.1e-81 304.7 210 66.2
AL3G28500 Arabidopsis lyrata HOM05D006424 ORTHO05D007945 2.7e-80 302.8 210 65.7
CiPaw.01G248200 Carya illinoinensis HOM05D006424 ORTHO05D007945 7.9e-80 301.2 203 67.0
CiPaw.02G157300 Carya illinoinensis HOM05D006424 ORTHO05D007945 7.9e-80 301.2 203 66.5
FAN14G0356 Fragaria x ananassa HOM05D006424 ORTHO05D007945 1.0e-79 300.8 206 64.1
FAN05G3690 Fragaria x ananassa HOM05D006424 ORTHO05D007945 1.3e-79 300.4 206 64.1
MD17G1212100 Malus domestica HOM05D006424 ORTHO05D007945 1.3e-79 300.4 211 64.0
Haze_16559 Corylus avellana HOM05D006424 ORTHO05D007945 2.3e-79 299.7 228 61.4
FAN02G1519 Fragaria x ananassa HOM05D006424 ORTHO05D007945 3.0e-79 299.3 206 63.6
Ciclev10026222m.g Citrus clementina HOM05D006424 ORTHO05D007945 6.7e-79 298.1 204 63.2
BolC3t17067H Brassica oleracea HOM05D006424 ORTHO05D007945 4.3e-78 295.4 230 60.0
Nitab4.5_0003157g0020 Nicotiana tabacum HOM05D006424 ORTHO05D007945 5.6e-78 295.0 209 67.5
Atru.chr1.2950 Acer truncatum HOM05D006424 ORTHO05D007945 1.8e-76 290.0 202 63.4
FvH4_6g29710 Fragaria vesca HOM05D006424 ORTHO05D007945 6.9e-76 288.1 196 64.3
arahy.Tifrunner.gnm1.ann1.92ZGJC Arachis hypogaea HOM05D006424 ORTHO05D007945 1.2e-72 277.3 203 62.1
FAN09G3401 Fragaria x ananassa HOM05D006424 ORTHO05D007945 3.0e-71 272.7 224 57.1
Mapoly0024s0088 Marchantia polymorpha HOM05D006424 ORTHO05D007945 1.3e-69 267.3 204 57.8
AagrBONN_evm.TU.Sc2ySwM_344.5484 Anthoceros agrestis HOM05D006424 ORTHO05D007945 2.4e-68 263.1 214 54.2
Pp3c22_2660 Physcomitrium patens HOM05D006424 ORTHO05D007945 2.4e-68 263.1 210 58.1
SalBow2G1302 Salvia bowleyana HOM05D006424 ORTHO05D007945 1.5e-67 260.4 214 58.4
CBR_g38381 Chara braunii HOM05D006424 ORTHO05D007945 3.8e-66 255.8 204 53.9
Pp3c9_11540 Physcomitrium patens HOM05D006424 ORTHO05D007945 3.8e-66 255.8 209 56.0
SMO331G0083 Selaginella moellendorffii HOM05D006424 ORTHO05D007945 6.0e-64 248.4 205 53.2
Dinv38123 Davidia involucrata HOM05D006424 ORTHO05D007945 4.5e-59 232.3 140 73.6
Sed0007474 Sechium edule HOM05D006424 ORTHO05D007945 5.1e-55 218.8 132 68.9
Thecc.06G024600 Theobroma cacao HOM05D006424 ORTHO05D007945 1.5e-54 217.2 192 54.7
Thecc.K0004600 Theobroma cacao HOM05D006424 ORTHO05D007945 4.3e-54 215.7 146 66.4
Pp3c15_11500 Physcomitrium patens HOM05D006424 ORTHO05D007945 2.6e-51 206.5 198 49.0
SEGI_16074 Sequoiadendron giganteum HOM05D006424 ORTHO05D007945 4.2e-49 199.1 132 61.4
Hund06560 Selenicereus undatus HOM05D006424 ORTHO05D007945 6.7e-47 191.8 165 55.2
arahy.Tifrunner.gnm1.ann1.7R86JN Arachis hypogaea HOM05D006424 ORTHO05D007945 7.2e-41 171.8 202 46.0
EL10Ac9g21901 Beta vulgaris HOM05D006424 ORTHO05D007945 5.9e-35 152.1 90 72.2
Psat7g257120 Pisum sativum HOM05D006424 ORTHO05D007945 1.5e-33 147.5 96 67.7
QL05p029868 Quercus lobata HOM05D006424 ORTHO05D007945 5.2e-23 112.5 72 68.1
QL05p029832 Quercus lobata HOM05D006424 ORTHO05D007945 1.5e-17 94.4 59 66.1
Oeu000425.1 Olea europaea HOM05D006424 ORTHO05D007945 2.1e-16 90.5 107 46.7
arahy.Tifrunner.gnm1.ann1.ZYH6JG Arachis hypogaea HOM05D006424 ORTHO05D007945 9.2e-12 75.1 55 56.4
arahy.Tifrunner.gnm1.ann1.YP381G Arachis hypogaea HOM05D006424 ORTHO05D007945 3.1e-07 60.1 47 55.3


User provided reference genes

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