Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb048780 Zea mays HOM05D001047 ORTHO05D000768 1.5e-82 309.7 183 100.0
Zm00001eb223620 Zea mays HOM05D001047 ORTHO05D000768 3.9e-30 135.6 169 61.5
Os10g0391400 Oryza sativa ssp. japonica HOM05D001047 ORTHO05D000768 1.9e-29 133.3 173 61.3
Zm00001eb048770 Zea mays HOM05D001047 ORTHO05D000768 8.7e-22 107.8 175 53.1
Zm00001eb006000 Zea mays HOM05D001047 ORTHO05D000768 3.4e-18 95.9 167 49.1
Os03g0181100 Oryza sativa ssp. japonica HOM05D001047 ORTHO05D000768 3.5e-15 85.9 169 41.4
Os10g0392400 Oryza sativa ssp. japonica HOM05D001047 ORTHO05D000768 1.1e-11 74.3 179 35.2
RcHm_v2.0_Chr2g0146371 Rosa chinensis HOM05D001047 ORTHO05D000768 2.5e-08 63.2 156 36.5
Os07g0615200 Oryza sativa ssp. japonica HOM05D001047 ORTHO05D000768 5.5e-08 62.0 225 34.2
Os10g0391801 Oryza sativa ssp. japonica HOM05D001047 ORTHO05D000768 7.2e-08 61.6 145 41.4
Zm00001eb132920 Zea mays HOM05D014806 ORTHO05D000768 1.6e-07 60.5 134 40.3
FAN02G1879 Fragaria x ananassa HOM05D001047 ORTHO05D000768 2.7e-07 59.7 156 33.3
Oeu025295.1 Olea europaea HOM05D001047 ORTHO05D000768 2.7e-07 59.7 191 30.4
AUR62001446 Chenopodium quinoa HOM05D001047 ORTHO05D000768 3.6e-07 59.3 115 40.0
SalBow5G2121 Salvia bowleyana HOM05D001047 ORTHO05D000768 3.6e-07 59.3 164 33.5
Zm00001eb223590 Zea mays HOM05D001047 ORTHO05D000768 6.1e-07 58.5 101 44.6
Os03g0180800 Oryza sativa ssp. japonica HOM05D001047 ORTHO05D049874 7.9e-07 58.2 155 34.8
Os03g0180900 Oryza sativa ssp. japonica HOM05D001047 ORTHO05D000768 7.9e-07 58.2 180 32.8
arahy.Tifrunner.gnm1.ann1.76C240 Arachis hypogaea HOM05D001047 ORTHO05D000768 1.0e-06 57.8 85 47.1
CsaV3_6G007840 Cucumis sativus L. HOM05D006285 ORTHO05D007249 1.0e-06 57.8 91 47.3
DCAR_011935 Daucus carota HOM05D001047 ORTHO05D000768 1.0e-06 57.8 179 32.4
HanXRQChr12g0354451 Helianthus annuus HOM05D001047 ORTHO05D000768 1.0e-06 57.8 82 45.1
FAN09G2579 Fragaria x ananassa HOM05D001047 ORTHO05D000768 1.4e-06 57.4 156 33.3
TAR624G0161 Trochodendron aralioides HOM05D001047 ORTHO05D000768 1.4e-06 57.4 93 45.2
unitig_8.g4682 Utricularia gibba HOM05D001047 ORTHO05D000768 1.4e-06 57.4 160 36.2
FAN14G3719 Fragaria x ananassa HOM05D001047 ORTHO05D000768 1.8e-06 57.0 157 33.1
SEGI_19168 Sequoiadendron giganteum HOM05D001047 ORTHO05D000768 2.3e-06 56.6 79 45.6
MELO3C022348.2 Cucumis melo HOM05D006285 ORTHO05D007249 3.9e-06 55.8 79 51.9
FvH4_6g35140 Fragaria vesca HOM05D001047 ORTHO05D000768 3.9e-06 55.8 164 32.9
Nitab4.5_0004234g0080 Nicotiana tabacum HOM05D001047 ORTHO05D000768 3.9e-06 55.8 110 40.0
ClCG06G001800 Citrullus lanatus HOM05D006285 ORTHO05D007249 5.1e-06 55.5 89 48.3
HPP92_026310 Vanilla planifolia HOM05D001047 ORTHO05D000768 5.1e-06 55.5 143 31.5
HanXRQChr10g0311841 Helianthus annuus HOM05D001047 ORTHO05D000768 6.7e-06 55.1 88 47.7
HanXRQChr15g0497141 Helianthus annuus HOM05D001047 ORTHO05D000768 6.7e-06 55.1 94 41.5
Lsat_1_v5_gn_4_91521 Lactuca sativa HOM05D001047 ORTHO05D000768 6.7e-06 55.1 112 41.1
SGA_v2.0_scaffold31G12677 Striga asiatica HOM05D001047 ORTHO05D000768 6.7e-06 55.1 108 37.0
Zm00001eb342610 Zea mays HOM05D014806 ORTHO05D000768 6.7e-06 55.1 88 44.3


User provided reference genes

Program Settings