Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb044550 Zea mays HOM05D006332 ORTHO05D008421 3.1e-265 917.9 462 100.0
Actinidia01892 Actinidia chinensis HOM05D006332 ORTHO05D008421 2.0e-163 579.7 441 66.4
TAR629G2846 Trochodendron aralioides HOM05D006332 ORTHO05D008421 2.6e-163 579.3 441 66.7
Migut.H01511 Erythranthe guttata HOM05D006332 ORTHO05D008421 1.8e-161 573.2 442 65.2
Cpa.g.sc27.66 Carica papaya HOM05D006332 ORTHO05D008421 7.0e-161 571.2 435 66.9
Dinv07538 Davidia involucrata HOM05D006332 ORTHO05D008421 1.0e-159 567.4 441 65.5
GSVIVG01002030001 Vitis vinifera HOM05D006332 ORTHO05D008421 2.3e-159 566.2 439 66.1
Prupe.4G044000 Prunus persica HOM05D006332 ORTHO05D008421 3.9e-159 565.5 438 65.5
Thecc.06G190700 Theobroma cacao HOM05D006332 ORTHO05D008421 4.3e-158 562.0 442 64.0
MSTRG.13186 Avicennia marina HOM05D006332 ORTHO05D008421 5.6e-158 561.6 447 64.0
Gohir.D06G130900 Gossypium hirsutum HOM05D006332 ORTHO05D008421 5.6e-158 561.6 442 63.8
Duzib235G1125 Durio zibethinus HOM05D006332 ORTHO05D008421 9.5e-158 560.8 439 65.4
Lj1C1207T6 Lonicera japonica HOM05D006332 ORTHO05D008421 4.7e-157 558.5 432 65.3
Nn6g34413 Nelumbo nucifera HOM05D006332 ORTHO05D008421 6.2e-157 558.1 440 63.9
PGR004G2698 Punica granatum HOM05D006332 ORTHO05D008421 6.2e-157 558.1 447 63.1
CANSAT35G2021 Cannabis sativa HOM05D006332 ORTHO05D008421 8.0e-157 557.8 439 63.8
HanXRQChr04g0124141 Helianthus annuus HOM05D006332 ORTHO05D008421 1.8e-156 556.6 441 64.2
PGSC0003DMG400022831 Solanum tuberosum HOM05D006332 ORTHO05D008421 4.0e-156 555.4 449 63.7
Cc02_g13080 Coffea canephora HOM05D006332 ORTHO05D008421 6.8e-156 554.7 444 64.2
Gohir.A06G126100 Gossypium hirsutum HOM05D006332 ORTHO05D008421 6.8e-156 554.7 444 63.5
Lj4g0020818 Lotus japonicus HOM05D006332 ORTHO05D008421 8.9e-156 554.3 436 65.4
Phvul.002G227700 Phaseolus vulgaris HOM05D006332 ORTHO05D008421 1.2e-155 553.9 442 65.4
MD10G1296600 Malus domestica HOM05D006332 ORTHO05D008421 1.5e-155 553.5 443 64.1
Aqoxy1G02544 Aquilegia oxysepala HOM05D006332 ORTHO05D008421 2.6e-155 552.7 438 64.4
Glyma.13G181100 Glycine max HOM05D006332 ORTHO05D008421 3.4e-155 552.4 440 64.5
HanXRQChr01g0003951 Helianthus annuus HOM05D006332 ORTHO05D008421 9.8e-155 550.8 435 64.4
MD05G1316100 Malus domestica HOM05D006332 ORTHO05D008421 9.8e-155 550.8 443 63.2
Solyc10g008990.4 Solanum lycopersicum HOM05D006332 ORTHO05D008421 1.7e-154 550.1 445 63.1
Eucgr.D00641 Eucalyptus grandis HOM05D006332 ORTHO05D008421 2.2e-154 549.7 444 65.1
HPP92_001753 Vanilla planifolia HOM05D006332 ORTHO05D008421 2.2e-154 549.7 446 63.5
CiPaw.09G057500 Carya illinoinensis HOM05D006332 ORTHO05D008421 4.9e-154 548.5 445 63.6
arahy.Tifrunner.gnm1.ann1.5TP18E Arachis hypogaea HOM05D006332 ORTHO05D008421 8.3e-154 547.7 433 64.7
arahy.Tifrunner.gnm1.ann1.I941VF Arachis hypogaea HOM05D006332 ORTHO05D008421 1.1e-153 547.4 432 64.8
FAN16G1437 Fragaria x ananassa HOM05D006332 ORTHO05D008421 1.4e-153 547.0 438 64.2
FvH4_3g04870 Fragaria vesca HOM05D006332 ORTHO05D008421 2.4e-153 546.2 440 63.4
Ca_18532_v3 Cicer arietinum L. HOM05D006332 ORTHO05D008421 3.2e-153 545.8 439 63.6
Oeu053924.1 Olea europaea HOM05D006332 ORTHO05D008421 4.1e-153 545.4 440 63.4
COL.COLO4_31500 Corchorus olitorius HOM05D006332 ORTHO05D008421 5.4e-153 545.0 465 61.3
PSO063G3883 Papaver somniferum HOM05D006332 ORTHO05D008421 5.4e-153 545.0 445 62.2
THA.LOC104817534 Tarenaya hassleriana HOM05D006332 ORTHO05D008421 5.4e-153 545.0 445 63.4
RcHm_v2.0_Chr5g0008031 Rosa chinensis HOM05D006332 ORTHO05D008421 2.7e-152 542.7 440 63.2
AT2G47960 Arabidopsis thaliana HOM05D006332 ORTHO05D008421 6.0e-152 541.6 441 63.3
TWI38G1702 Tripterygium wilfordii HOM05D006332 ORTHO05D008421 7.8e-152 541.2 445 63.4
Psat7g112800 Pisum sativum HOM05D006332 ORTHO05D008421 1.0e-151 540.8 439 63.6
AL4G47550 Arabidopsis lyrata HOM05D006332 ORTHO05D008421 1.3e-151 540.4 439 63.3
FAN11G2101 Fragaria x ananassa HOM05D003523 ORTHO05D004493 1.3e-151 540.4 440 62.7
Thhalv10018568m.g Eutrema salsugineum HOM05D006332 ORTHO05D008421 1.7e-151 540.0 443 62.3
TPR.G12057 Trifolium pratense HOM05D006332 ORTHO05D008421 2.3e-151 539.7 444 62.6
VMungo0251G1219 Vigna mungo HOM05D006332 ORTHO05D008421 2.3e-151 539.7 436 64.4
CSS0022240 Camellia sinensis var. sinensis HOM05D006332 ORTHO05D008421 3.0e-151 539.3 441 63.7
Hma1.2p1_0881F.1_g231970 Hydrangea macrophylla HOM05D006332 ORTHO05D008421 3.0e-151 539.3 436 64.4
FAN21G2488 Fragaria x ananassa HOM05D003523 ORTHO05D004493 6.6e-151 538.1 431 63.1
PSO782G1256 Papaver somniferum HOM05D006332 ORTHO05D008421 6.6e-151 538.1 445 61.8
Lalb_Chr16g0383661 Lupinus albus HOM05D006332 ORTHO05D008421 1.1e-150 537.3 439 64.0
BcaC02g12534 Brassica carinata HOM05D006332 ORTHO05D008421 1.9e-150 536.6 443 62.3
QL05p039635 Quercus lobata HOM05D006332 ORTHO05D008421 1.9e-150 536.6 456 61.8
Sp4g29880 Schrenkiella parvula HOM05D006332 ORTHO05D008421 1.9e-150 536.6 445 62.5
Carub.0004s3069 Capsella rubella HOM05D006332 ORTHO05D008421 3.3e-150 535.8 449 61.9
CsaV3_1G012160 Cucumis sativus L. HOM05D006332 ORTHO05D008421 3.3e-150 535.8 443 61.9
Duzib160G0593 Durio zibethinus HOM05D006332 ORTHO05D008421 3.3e-150 535.8 436 63.3
Glyma.07G195200 Glycine max HOM05D006332 ORTHO05D008421 5.6e-150 535.0 439 63.1
Gorai.010G152800 Gossypium raimondii HOM05D006332 ORTHO05D008421 7.3e-150 534.6 428 63.8
Medtr4g088960 Medicago truncatula HOM05D006332 ORTHO05D008421 7.3e-150 534.6 440 62.5
Sed0003237 Sechium edule HOM05D006332 ORTHO05D008421 8.1e-149 531.2 442 61.3
MELO3C002589.2 Cucumis melo HOM05D006332 ORTHO05D008421 1.4e-148 530.4 443 60.9
EL10Ac8g20347 Beta vulgaris HOM05D006332 ORTHO05D008421 1.8e-148 530.0 435 62.1
A05p00090 Brassica napus HOM05D004682 ORTHO05D006197 2.3e-148 529.6 437 62.7
BraA05t19005Z Brassica rapa HOM05D004682 ORTHO05D006197 2.3e-148 529.6 437 62.7
C04p00010 Brassica napus HOM05D004682 ORTHO05D006197 4.0e-148 528.9 436 62.4
BolC4t21648H Brassica oleracea HOM05D004682 ORTHO05D006197 4.0e-148 528.9 436 62.4
Haze_06500 Corylus avellana HOM05D006332 ORTHO05D008421 4.0e-148 528.9 449 61.2
BcaB02g08727 Brassica carinata HOM05D006332 ORTHO05D008421 5.2e-148 528.5 447 62.2
Gohir.A10G024200 Gossypium hirsutum HOM05D006332 ORTHO05D008421 8.9e-148 527.7 438 61.2
Potri.004G040500 Populus trichocarpa HOM05D006332 ORTHO05D008421 1.2e-147 527.3 439 62.4
Manes.16G025600 Manihot esculenta HOM05D006332 ORTHO05D008421 2.6e-147 526.2 443 62.1
CDE08G0172 Ceratophyllum demersum HOM05D006332 ORTHO05D008421 1.3e-146 523.9 441 59.0
ClCG03G005920 Citrullus lanatus HOM05D006332 ORTHO05D008421 2.9e-146 522.7 437 60.9
ECA236G3091 Erigeron canadensis HOM05D006332 ORTHO05D008421 3.7e-146 522.3 444 60.6
Gorai.011G026200 Gossypium raimondii HOM05D006332 ORTHO05D008421 4.9e-146 521.9 432 61.3
ATR0680G340 Amborella trichopoda HOM05D006332 ORTHO05D008421 8.3e-146 521.2 433 62.8
TWI63G1670 Tripterygium wilfordii HOM05D006332 ORTHO05D008421 1.1e-145 520.8 459 61.0
ECA248G3961 Erigeron canadensis HOM05D006332 ORTHO05D008421 3.2e-145 519.2 438 61.2
Gohir.D10G024900 Gossypium hirsutum HOM05D006332 ORTHO05D008421 4.1e-145 518.8 431 61.0
Nitab4.5_0003942g0020 Nicotiana tabacum HOM05D006332 ORTHO05D008421 9.2e-145 517.7 449 60.4
AUR62016979 Chenopodium quinoa HOM05D006332 ORTHO05D008421 1.7e-143 513.5 442 60.4
Peaxi162Scf00530g00823 Petunia axillaris HOM05D006332 ORTHO05D008421 3.9e-143 512.3 444 60.4
AUR62014792 Chenopodium quinoa HOM05D006332 ORTHO05D008421 8.9e-140 501.1 459 58.6
CARHR143350 Cardamine hirsuta HOM05D006332 ORTHO05D008421 9.2e-137 491.1 388 64.9
MBI17_g03748_MAGBIO Magnolia biondii HOM05D006332 ORTHO05D008421 2.3e-135 486.5 434 60.6
Nn1g04020 Nelumbo nucifera HOM05D006332 ORTHO05D008421 3.9e-135 485.7 367 68.4
Lsat_1_v5_gn_7_19001 Lactuca sativa HOM05D006332 ORTHO05D008421 1.1e-134 484.2 434 59.0
Ciclev10015324m.g Citrus clementina HOM05D006332 ORTHO05D008421 1.9e-134 483.4 446 57.8
SGA_v2.0_scaffold49G18281 Striga asiatica HOM05D006332 ORTHO05D008421 3.3e-134 482.6 459 56.4
Aa31LG1G29380 Aethionema arabicum HOM05D006332 ORTHO05D008421 3.6e-133 479.2 443 58.2
Sabra04G0025000 Salix brachista HOM05D006332 ORTHO05D008421 4.2e-129 465.7 499 53.5
Hma1.2p1_0126F.1_g059220 Hydrangea macrophylla HOM05D006332 ORTHO05D008421 4.6e-128 462.2 454 55.5
Cfa000416 Carpinus fangiana HOM05D006332 ORTHO05D008421 6.6e-127 458.4 338 66.3
DCAR_004087 Daucus carota HOM05D006332 ORTHO05D008421 6.9e-124 448.4 349 65.0
Lsat_1_v5_gn_1_127821 Lactuca sativa HOM05D006332 ORTHO05D008421 1.2e-123 447.6 439 54.4
Hund21245 Selenicereus undatus HOM05D006332 ORTHO05D008421 6.0e-120 435.3 442 54.1
Hma1.2p1_0881F.1_g231960 Hydrangea macrophylla HOM05D006332 ORTHO05D008421 1.0e-119 434.5 344 66.3
Duzib192G0908 Durio zibethinus HOM05D006332 ORTHO05D008421 1.8e-119 433.7 391 59.1
Nitab4.5_0009738g0010 Nicotiana tabacum HOM05D006332 ORTHO05D008421 2.8e-117 426.4 361 60.7
AagrBONN_evm.TU.Sc2ySwM_344.1820 Anthoceros agrestis HOM05D006332 ORTHO05D008421 2.4e-116 423.3 443 50.1
unitig_8.g3355 Utricularia gibba HOM05D006332 ORTHO05D008421 2.4e-113 413.3 450 51.8
Pp3c1_28670 Physcomitrium patens HOM05D006332 ORTHO05D008421 4.6e-112 409.1 440 49.1
Mapoly0122s0006 Marchantia polymorpha HOM05D006332 ORTHO05D008421 1.3e-111 407.5 447 49.2
SMO364G0571 Selaginella moellendorffii HOM05D006332 ORTHO05D008421 8.7e-111 404.8 437 48.7
Sc24g0000810 Simmondsia chinensis HOM05D006332 ORTHO05D008421 6.2e-109 398.7 305 66.6
CAN.G413.15 Capsicum annuum HOM05D006332 ORTHO05D008421 9.0e-108 394.8 329 61.4
Atru.chr10.1934 Acer truncatum HOM05D006332 ORTHO05D008421 2.0e-99 367.1 287 67.2
SMO364G0067 Selaginella moellendorffii HOM05D006332 ORTHO05D008421 2.7e-88 330.1 313 52.7
CBR_g24248 Chara braunii HOM05D006332 ORTHO05D008421 9.7e-78 295.0 460 39.3
Gohir.A10G024325 Gossypium hirsutum HOM05D006332 ORTHO05D008421 3.0e-71 273.5 205 69.3
SHI01800 Sapria himalayana HOM05D006332 ORTHO05D008421 9.7e-70 268.5 276 55.8
Nitab4.5_0009738g0020 Nicotiana tabacum HOM05D006332 ORTHO05D008421 2.6e-62 243.8 241 50.2
Sopen10g004770 Solanum pennellii HOM05D006332 ORTHO05D008421 4.8e-61 239.6 215 54.4
PRCOL_00003805 Prasinoderma coloniale HOM05D006332 ORTHO05D008421 1.7e-42 177.9 398 32.4
Gohir.A10G024350 Gossypium hirsutum HOM05D006332 ORTHO05D008421 3.2e-36 157.1 157 49.0
SHI01798 Sapria himalayana HOM05D000002 ORTHO05D000001 6.0e-27 126.3 201 38.3
Ciclev10009862m.g Citrus clementina HOM05D006332 ORTHO05D008421 2.3e-26 124.4 102 59.8
Atru.chr10.1933 Acer truncatum HOM05D006332 ORTHO05D008421 6.2e-24 116.3 119 47.1
Os10g0498800 Oryza sativa ssp. japonica HOM05D006332 ORTHO05D008421 9.9e-22 109.0 64 87.5
PSO017G7020 Papaver somniferum HOM05D006332 ORTHO05D000676 7.3e-17 92.8 113 38.9
TPR.G24681 Trifolium pratense HOM05D006332 ORTHO05D001923 2.8e-16 90.9 59 69.5
PSO170G5489 Papaver somniferum HOM05D006332 ORTHO05D008421 3.6e-16 90.5 99 41.4
Nitab4.5_0009738g0030 Nicotiana tabacum HOM05D006332 ORTHO05D008421 1.9e-09 68.2 95 45.3
CDE02G4141 Ceratophyllum demersum HOM05D006332 ORTHO05D008421 9.9e-06 55.8 32 78.1


User provided reference genes

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