Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb044420 Zea mays HOM05D005869 ORTHO05D007229 2.7e-177 625.2 308 100.0
Nn4g22166 Nelumbo nucifera HOM05D005869 ORTHO05D007229 3.2e-85 319.3 278 62.6
ATR0829G022 Amborella trichopoda HOM05D005869 ORTHO05D007229 1.9e-82 310.1 286 58.0
TAR622G0237 Trochodendron aralioides HOM05D005869 ORTHO05D007229 7.4e-82 308.1 289 57.1
GSVIVG01004938001 Vitis vinifera HOM05D005869 ORTHO05D007229 1.3e-81 307.4 308 53.9
PSO017G3988 Papaver somniferum HOM05D005869 ORTHO05D007229 1.6e-81 307.0 287 56.4
Atru.chr11.2424 Acer truncatum HOM05D005869 ORTHO05D007229 6.3e-81 305.1 281 56.9
Hma1.2p1_1834F.1_g304595 Hydrangea macrophylla HOM05D005869 ORTHO05D007229 6.3e-81 305.1 289 56.4
Sopen12g020650 Solanum pennellii HOM05D005869 ORTHO05D007229 6.3e-81 305.1 290 55.2
Solyc12g041880.2 Solanum lycopersicum HOM05D005869 ORTHO05D007229 8.2e-81 304.7 290 55.9
PSO478G4440 Papaver somniferum HOM05D005869 ORTHO05D007229 3.1e-80 302.8 282 58.2
THA.LOC104820535 Tarenaya hassleriana HOM05D005869 ORTHO05D007229 3.1e-80 302.8 290 55.2
Aqoxy5G03171 Aquilegia oxysepala HOM05D005869 ORTHO05D007229 2.0e-79 300.1 291 55.7
Ciclev10032244m.g Citrus clementina HOM05D005869 ORTHO05D007229 7.7e-79 298.1 279 55.9
TWI36G0175 Tripterygium wilfordii HOM05D005869 ORTHO05D007229 1.7e-78 297.0 287 53.7
BcaC06g35333 Brassica carinata HOM05D005869 ORTHO05D007229 2.9e-78 296.2 288 54.9
Potri.003G163800 Populus trichocarpa HOM05D005869 ORTHO05D007229 2.9e-78 296.2 290 54.5
Gohir.D02G175000 Gossypium hirsutum HOM05D005869 ORTHO05D007229 3.8e-78 295.8 271 57.2
PGSC0003DMG400014477 Solanum tuberosum HOM05D005869 ORTHO05D007229 5.0e-78 295.4 293 53.9
Gohir.A03G152800 Gossypium hirsutum HOM05D005869 ORTHO05D007229 1.4e-77 293.9 271 56.8
Thhalv10008411m.g Eutrema salsugineum HOM05D005869 ORTHO05D007229 2.5e-77 293.1 289 54.7
Nitab4.5_0002899g0010 Nicotiana tabacum HOM05D005869 ORTHO05D007229 2.5e-77 293.1 292 55.1
Gorai.005G196600 Gossypium raimondii HOM05D005869 ORTHO05D007229 4.2e-77 292.4 271 56.8
CARHR027570 Cardamine hirsuta HOM05D005869 ORTHO05D007229 5.5e-77 292.0 288 55.2
Thecc.02G194400 Theobroma cacao HOM05D005869 ORTHO05D007229 7.2e-77 291.6 271 56.8
RcHm_v2.0_Chr4g0429061 Rosa chinensis HOM05D005869 ORTHO05D007229 1.6e-76 290.4 293 53.2
AT1G28100 Arabidopsis thaliana HOM05D005869 ORTHO05D007229 2.1e-76 290.0 290 54.8
Potri.001G066000 Populus trichocarpa HOM05D005869 ORTHO05D007229 2.1e-76 290.0 292 52.4
Oeu044507.2 Olea europaea HOM05D005869 ORTHO05D007229 2.7e-76 289.7 288 55.9
Actinidia09599 Actinidia chinensis HOM05D005869 ORTHO05D007229 6.1e-76 288.5 291 55.7
A07p11480 Brassica napus HOM05D005869 ORTHO05D007229 7.9e-76 288.1 297 53.2
Sabra01G0045900 Salix brachista HOM05D005869 ORTHO05D007229 1.0e-75 287.7 301 52.5
Sp1g24290 Schrenkiella parvula HOM05D005869 ORTHO05D007229 1.4e-75 287.3 288 53.8
PGR102G3220 Punica granatum HOM05D005869 ORTHO05D007229 1.8e-75 287.0 292 53.1
Cc11_g15130 Coffea canephora HOM05D005869 ORTHO05D007229 2.3e-75 286.6 276 55.4
Duzib132G0160 Durio zibethinus HOM05D005869 ORTHO05D007229 2.3e-75 286.6 271 55.0
Prupe.1G217100 Prunus persica HOM05D005869 ORTHO05D007229 3.0e-75 286.2 286 52.4
CDE05G0434 Ceratophyllum demersum HOM05D005869 ORTHO05D007229 5.1e-75 285.4 286 54.2
Carub.0001s2653 Capsella rubella HOM05D005869 ORTHO05D007229 8.8e-75 284.6 278 54.7
Migut.K01077 Erythranthe guttata HOM05D005869 ORTHO05D007229 8.8e-75 284.6 281 55.5
BraA07t28937Z Brassica rapa HOM05D005869 ORTHO05D007229 1.1e-74 284.3 304 51.6
Manes.08G102300 Manihot esculenta HOM05D005869 ORTHO05D007229 1.5e-74 283.9 290 52.1
C07p17290 Brassica napus HOM05D005869 ORTHO05D007229 2.5e-74 283.1 288 53.5
Eucgr.B03550 Eucalyptus grandis HOM05D005869 ORTHO05D007229 2.5e-74 283.1 272 58.5
FvH4_4g22830 Fragaria vesca HOM05D005869 ORTHO05D007229 2.5e-74 283.1 273 53.1
AL1G41620 Arabidopsis lyrata HOM05D005869 ORTHO05D007229 4.3e-74 282.3 290 54.5
HPP92_000723 Vanilla planifolia HOM05D005869 ORTHO05D007229 5.7e-74 282.0 290 50.0
CSS0039203 Camellia sinensis var. sinensis HOM05D005869 ORTHO05D007229 9.7e-74 281.2 287 55.1
MD16G1129300 Malus domestica HOM05D005869 ORTHO05D007229 2.2e-73 280.0 296 51.4
ClCG07G011870 Citrullus lanatus HOM05D005869 ORTHO05D007229 2.8e-73 279.6 285 54.4
BolC7t42232H Brassica oleracea HOM05D005869 ORTHO05D007229 3.7e-73 279.3 295 51.9
MELO3C017808.2 Cucumis melo HOM05D005869 ORTHO05D007229 4.8e-73 278.9 288 54.2
EL10Ac6g13596 Beta vulgaris HOM05D005869 ORTHO05D007229 1.1e-72 277.7 289 52.2
BcaB07g32415 Brassica carinata HOM05D005869 ORTHO05D007229 2.4e-72 276.6 277 53.8
Rhsim12G0098100 Rhododendron simsii HOM05D005869 ORTHO05D007229 2.4e-72 276.6 294 53.7
Duzib052G0289 Durio zibethinus HOM05D005869 ORTHO05D007229 6.9e-72 275.0 277 53.4
Peaxi162Scf00128g01773 Petunia axillaris HOM05D005869 ORTHO05D007229 6.9e-72 275.0 269 56.1
CsaV3_4G002340 Cucumis sativus L. HOM05D005869 ORTHO05D007229 1.2e-71 274.2 286 52.8
Sed0007329 Sechium edule HOM05D005869 ORTHO05D007229 2.0e-71 273.5 282 53.5
arahy.Tifrunner.gnm1.ann1.WRPQ8T Arachis hypogaea HOM05D005869 ORTHO05D007229 2.6e-71 273.1 289 51.6
MSTRG.8047 Avicennia marina HOM05D005869 ORTHO05D007229 2.6e-71 273.1 298 50.3
MD13G1129300 Malus domestica HOM05D005869 ORTHO05D007229 3.4e-71 272.7 289 51.9
arahy.Tifrunner.gnm1.ann1.3C70LE Arachis hypogaea HOM05D005869 ORTHO05D007229 4.5e-71 272.3 289 51.6
BraA09t39308Z Brassica rapa HOM05D005869 ORTHO05D007229 1.7e-70 270.4 294 50.3
A09p37960 Brassica napus HOM05D005869 ORTHO05D007229 5.0e-70 268.9 279 53.0
C05p26800 Brassica napus HOM05D005869 ORTHO05D007229 1.9e-69 266.9 288 52.4
Lalb_Chr25g0285611 Lupinus albus HOM05D005869 ORTHO05D007229 2.5e-69 266.5 285 52.3
vmacro16076 Vaccinium macrocarpon HOM05D005869 ORTHO05D007229 2.5e-69 266.5 307 50.5
Phvul.005G075700 Phaseolus vulgaris HOM05D005869 ORTHO05D007229 3.2e-69 266.2 275 52.7
Psat1g007680 Pisum sativum HOM05D005869 ORTHO05D007229 5.5e-69 265.4 276 50.0
TPR.G35001 Trifolium pratense HOM05D005869 ORTHO05D007229 5.5e-69 265.4 271 52.4
CiPaw.05G102600 Carya illinoinensis HOM05D005869 ORTHO05D007229 7.2e-69 265.0 314 47.8
BcaC05g26814 Brassica carinata HOM05D005869 ORTHO05D007229 1.6e-68 263.8 270 54.8
Glyma.13G264200 Glycine max HOM05D005869 ORTHO05D007229 2.1e-68 263.5 283 51.2
Manes.09G187100 Manihot esculenta HOM05D005869 ORTHO05D007229 2.7e-68 263.1 219 58.9
ECA233G2015 Erigeron canadensis HOM05D005869 ORTHO05D007229 6.1e-68 261.9 289 49.5
Ah.03g135600 Amaranthus hybridus HOM05D005869 ORTHO05D007229 1.8e-67 260.4 276 52.2
Medtr2g072940 Medicago truncatula HOM05D005869 ORTHO05D007229 3.9e-67 259.2 274 51.1
BolC5t31401H Brassica oleracea HOM05D005869 ORTHO05D007229 6.7e-67 258.5 277 52.0
Pp3c14_12070 Physcomitrium patens HOM05D005869 ORTHO05D007229 3.3e-66 256.1 290 48.3
Lj3g0004461 Lotus japonicus HOM05D005869 ORTHO05D007229 2.2e-65 253.4 277 52.7
HanXRQChr12g0363371 Helianthus annuus HOM05D005869 ORTHO05D007229 1.8e-64 250.4 287 49.5
HanXRQChr08g0210441 Helianthus annuus HOM05D005869 ORTHO05D007229 2.4e-64 250.0 289 50.9
MBI11_g11870_MAGBIO Magnolia biondii HOM05D000422 ORTHO05D001248 1.0e-62 244.6 299 50.5
VMungo1080G1469 Vigna mungo HOM05D005869 ORTHO05D007229 1.1e-61 241.1 270 50.7
AagrBONN_evm.TU.Sc2ySwM_368.1764 Anthoceros agrestis HOM05D005869 ORTHO05D007229 3.6e-60 236.1 291 46.7
Sed0028093 Sechium edule HOM05D005869 ORTHO05D007229 5.3e-56 222.2 302 47.0
Aa31sc1106G20 Aethionema arabicum HOM05D005869 ORTHO05D007229 1.6e-55 220.7 343 41.4
Mapoly0153s0008 Marchantia polymorpha HOM05D005869 ORTHO05D007229 4.5e-55 219.2 307 43.6
HanXRQChr08g0210391 Helianthus annuus HOM05D005869 ORTHO05D007229 3.8e-54 216.1 307 43.0
Lj6A836G36 Lonicera japonica HOM05D005869 ORTHO05D007229 2.5e-53 213.4 297 45.1
BcaB03g13954 Brassica carinata HOM05D005869 ORTHO05D007229 4.2e-53 212.6 172 62.8
CANSAT01G1948 Cannabis sativa HOM05D005869 ORTHO05D007229 7.2e-53 211.8 242 48.8
Cpa.g.sc498.3 Carica papaya HOM05D005869 ORTHO05D007229 8.0e-52 208.4 178 60.1
MCO09G131 Micromonas commoda HOM05D005869 ORTHO05D007229 1.8e-51 207.2 288 43.8
Os10g0499600 Oryza sativa ssp. japonica HOM05D005869 ORTHO05D007229 5.3e-48 195.7 108 84.3
QL03p049767 Quercus lobata HOM05D005869 ORTHO05D007229 1.2e-47 194.5 175 57.1
Cre03.g194450 Chlamydomonas reinhardtii HOM05D005869 ORTHO05D007229 2.9e-46 189.9 292 41.1
Migut.K01074 Erythranthe guttata HOM05D005869 ORTHO05D007229 9.4e-45 184.9 156 61.5
Migut.K01075 Erythranthe guttata HOM05D005869 ORTHO05D007229 6.1e-44 182.2 283 38.5
Sabra03G0119100 Salix brachista HOM05D005869 ORTHO05D007229 6.1e-44 182.2 152 60.5
Sc04g0000100 Simmondsia chinensis HOM05D005869 ORTHO05D007229 1.8e-43 180.6 114 73.7
Sc04g0000040 Simmondsia chinensis HOM05D005869 ORTHO05D007229 2.3e-43 180.3 110 76.4
Haze_12488 Corylus avellana HOM05D005869 ORTHO05D007229 6.8e-43 178.7 279 40.9
PRCOL_00000815 Prasinoderma coloniale HOM05D005869 ORTHO05D007229 3.4e-42 176.4 284 39.8
BcaC05g26813 Brassica carinata HOM05D005869 ORTHO05D007229 4.8e-41 172.6 99 81.8
Oeu019435.1 Olea europaea HOM05D005869 ORTHO05D007229 2.4e-40 170.2 286 41.3
SGA_v2.0_scaffold201G41354 Striga asiatica HOM05D005869 ORTHO05D007229 5.4e-40 169.1 298 38.6
AUR62005704 Chenopodium quinoa HOM05D005869 ORTHO05D007229 3.5e-39 166.4 270 39.6
MSTRG.8048 Avicennia marina HOM05D005869 ORTHO05D007229 1.0e-38 164.9 282 36.9
SMO115G0111 Selaginella moellendorffii HOM05D005869 ORTHO05D007229 3.8e-38 162.9 105 74.3
CBR_g3946 Chara braunii HOM05D005869 ORTHO05D007229 2.5e-37 160.2 296 35.8
SalBow2G1918 Salvia bowleyana HOM05D005869 ORTHO05D007229 3.3e-37 159.8 340 34.7
SalBow7G3994 Salvia bowleyana HOM05D005869 ORTHO05D007229 4.0e-35 152.9 315 37.5
Hund16126 Selenicereus undatus HOM05D005869 ORTHO05D007229 1.6e-31 141.0 217 43.8
Migut.K01072 Erythranthe guttata HOM05D005869 ORTHO05D007229 4.5e-31 139.4 102 60.8
Nitab4.5_0000608g0060 Nicotiana tabacum HOM05D005869 ORTHO05D007229 1.7e-30 137.5 184 43.5
Lsat_1_v5_gn_4_151180 Lactuca sativa HOM05D005869 ORTHO05D007229 2.3e-30 137.1 230 38.7
FAN12G1770 Fragaria x ananassa HOM05D000001 ORTHO05D010470 3.3e-29 133.3 273 33.7
FAN07G2435 Fragaria x ananassa HOM05D000001 ORTHO05D010470 6.1e-28 129.0 308 30.5
FAN17G1058 Fragaria x ananassa HOM05D000001 ORTHO05D010470 2.0e-26 124.0 308 30.2
Dinv19137 Davidia involucrata HOM05D005869 ORTHO05D007229 2.9e-25 120.2 185 38.4
Migut.O00624 Erythranthe guttata HOM05D005869 ORTHO05D007229 1.4e-24 117.9 197 39.6
Migut.K01076 Erythranthe guttata HOM05D005869 ORTHO05D007229 8.6e-22 108.6 101 53.5
COL.COLO4_06415 Corchorus olitorius HOM05D005869 ORTHO05D007229 1.1e-21 108.2 148 44.6
Ca_03922_v3 Cicer arietinum L. HOM05D005869 ORTHO05D007229 4.7e-20 102.8 151 41.7
QL03p049770 Quercus lobata HOM05D005869 ORTHO05D007229 1.5e-18 97.8 110 48.2
Sc04g0000090 Simmondsia chinensis HOM05D005869 ORTHO05D007229 2.2e-17 94.0 136 41.9
Sc04g0000050 Simmondsia chinensis HOM05D005869 ORTHO05D007229 2.9e-17 93.6 136 41.9
Actinidia34002 Actinidia chinensis HOM05D005869 ORTHO05D007229 7.0e-16 89.0 48 87.5
unitig_26.g10430 Utricularia gibba HOM05D005869 ORTHO05D007229 4.6e-15 86.3 204 32.8
Hund16125 Selenicereus undatus HOM05D005869 ORTHO05D007229 3.9e-14 83.2 50 74.0
Pp3c14_11090 Physcomitrium patens HOM05D005869 ORTHO05D007229 3.4e-10 70.1 116 37.1
Glyma.12G234900 Glycine max HOM05D005869 ORTHO05D007229 3.5e-07 60.1 36 69.4
Migut.K01073 Erythranthe guttata HOM05D005869 ORTHO05D007229 1.0e-06 58.5 101 38.6
SEGI_05009 Sequoiadendron giganteum HOM05D005869 ORTHO05D007229 3.0e-06 57.0 96 40.6


User provided reference genes

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