Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb039400 Zea mays HOM05D006601 ORTHO05D008281 1.4e-57 226.5 154 100.0
Os08g0558700 Oryza sativa ssp. japonica HOM05D006601 ORTHO05D008281 7.1e-25 117.9 80 81.2
Phvul.002G091600 Phaseolus vulgaris HOM05D006601 ORTHO05D008281 1.7e-23 113.2 107 62.6
Glyma.01G052400 Glycine max HOM05D006601 ORTHO05D008281 7.3e-22 107.8 93 66.7
Lj2g0012177 Lotus japonicus HOM05D006601 ORTHO05D008281 7.3e-22 107.8 101 64.4
Rhsim09G0141800 Rhododendron simsii HOM05D006601 ORTHO05D008281 1.3e-21 107.1 101 60.4
Haze_03300 Corylus avellana HOM05D006601 ORTHO05D008281 1.6e-21 106.7 83 67.5
Hund22273 Selenicereus undatus HOM05D006601 ORTHO05D008281 1.6e-21 106.7 79 72.2
HPP92_000012 Vanilla planifolia HOM05D006601 ORTHO05D008281 1.6e-21 106.7 93 65.6
Lalb_Chr10g0098441 Lupinus albus HOM05D006601 ORTHO05D008281 2.8e-21 105.9 96 63.5
CSS0000414 Camellia sinensis var. sinensis HOM05D006601 ORTHO05D008281 4.8e-21 105.1 96 61.5
arahy.Tifrunner.gnm1.ann1.0XG3CD Arachis hypogaea HOM05D006601 ORTHO05D008281 6.2e-21 104.8 108 57.4
vmacro10311 Vaccinium macrocarpon HOM05D006601 ORTHO05D008281 8.1e-21 104.4 83 66.3
Oeu026608.1 Olea europaea HOM05D006601 ORTHO05D008281 1.4e-20 103.6 95 63.2
PSO692G0001 Papaver somniferum HOM05D006601 ORTHO05D008281 1.4e-20 103.6 104 60.6
PSO801G0555 Papaver somniferum HOM05D006601 ORTHO05D008281 1.4e-20 103.6 104 60.6
GSVIVG01010682001 Vitis vinifera HOM05D006601 ORTHO05D008281 1.4e-20 103.6 101 58.4
Glyma.02G110700 Glycine max HOM05D006601 ORTHO05D008281 1.8e-20 103.2 87 66.7
HanXRQChr11g0321661 Helianthus annuus HOM05D006601 ORTHO05D008281 1.8e-20 103.2 102 57.8
MBI17_g13115_MAGBIO Magnolia biondii HOM05D006601 ORTHO05D008281 2.4e-20 102.8 104 55.8
Aqoxy2G01120 Aquilegia oxysepala HOM05D006601 ORTHO05D008281 3.1e-20 102.4 71 77.5
Sc09g0005300 Simmondsia chinensis HOM05D006601 ORTHO05D008281 3.1e-20 102.4 106 57.5
CiPaw.13G041000 Carya illinoinensis HOM05D006601 ORTHO05D008281 4.0e-20 102.1 85 64.7
Ah.06g186680 Amaranthus hybridus HOM05D006601 ORTHO05D008281 6.9e-20 101.3 104 57.7
Oeu030223.2 Olea europaea HOM05D006601 ORTHO05D008281 6.9e-20 101.3 108 54.6
PSO339G2358 Papaver somniferum HOM05D006601 ORTHO05D008281 9.0e-20 100.9 105 59.0
ClCG08G008320 Citrullus lanatus HOM05D006601 ORTHO05D008281 1.5e-19 100.1 66 77.3
Lj3A925T73 Lonicera japonica HOM05D006601 ORTHO05D008281 1.5e-19 100.1 83 62.7
Medtr5g042160 Medicago truncatula HOM05D006601 ORTHO05D008281 1.5e-19 100.1 99 58.6
Cfa010329 Carpinus fangiana HOM05D006601 ORTHO05D008281 2.6e-19 99.4 93 62.4
DCAR_006335 Daucus carota HOM05D006601 ORTHO05D008281 2.6e-19 99.4 103 56.3
Lsat_1_v5_gn_0_8161 Lactuca sativa HOM05D006601 ORTHO05D008281 4.4e-19 98.6 73 72.6
Manes.10G062700 Manihot esculenta HOM05D006601 ORTHO05D008281 4.4e-19 98.6 66 74.2
Ca_04833_v3 Cicer arietinum L. HOM05D006601 ORTHO05D008281 5.8e-19 98.2 90 58.9
Sabra10G0188100 Salix brachista HOM05D006601 ORTHO05D008281 5.8e-19 98.2 95 56.8
Potri.010G240300 Populus trichocarpa HOM05D006601 ORTHO05D008281 7.6e-19 97.8 94 57.4
RcHm_v2.0_Chr6g0269151 Rosa chinensis HOM05D006601 ORTHO05D008281 7.6e-19 97.8 92 60.9
ECA232G0968 Erigeron canadensis HOM05D006601 ORTHO05D008281 9.9e-19 97.4 75 69.3
FAN24G1745 Fragaria x ananassa HOM05D006601 ORTHO05D008281 9.9e-19 97.4 100 60.0
Psat2g116120 Pisum sativum HOM05D006601 ORTHO05D008281 9.9e-19 97.4 91 59.3
TAR633G2162 Trochodendron aralioides HOM05D006601 ORTHO05D008281 9.9e-19 97.4 103 58.3
Cc02_g09570 Coffea canephora HOM05D006601 ORTHO05D008281 2.2e-18 96.3 58 79.3
arahy.Tifrunner.gnm1.ann1.VBS9AQ Arachis hypogaea HOM05D006601 ORTHO05D008281 2.9e-18 95.9 87 62.1
FvH4_2g10940 Fragaria vesca HOM05D006601 ORTHO05D008281 2.9e-18 95.9 100 59.0
Potri.008G019100 Populus trichocarpa HOM05D006601 ORTHO05D008281 2.9e-18 95.9 103 52.4
Atru.chr12.1047 Acer truncatum HOM05D006601 ORTHO05D008281 3.8e-18 95.5 103 52.4
MELO3C019900.2 Cucumis melo HOM05D006601 ORTHO05D008281 4.9e-18 95.1 66 74.2
QL04p046797 Quercus lobata HOM05D006601 ORTHO05D008281 4.9e-18 95.1 78 65.4
QL04p047245 Quercus lobata HOM05D006601 ORTHO05D008281 4.9e-18 95.1 78 65.4
TWI38G1517 Tripterygium wilfordii HOM05D006601 ORTHO05D008281 4.9e-18 95.1 109 50.5
MD06G1038200 Malus domestica HOM05D006601 ORTHO05D008281 6.4e-18 94.7 97 56.7
Nn6g34864 Nelumbo nucifera HOM05D006601 ORTHO05D008281 6.4e-18 94.7 54 83.3
Nitab4.5_0002586g0010 Nicotiana tabacum HOM05D006601 ORTHO05D008281 6.4e-18 94.7 105 54.3
CsaV3_6G004290 Cucumis sativus L. HOM05D006601 ORTHO05D008281 8.4e-18 94.4 69 71.0
Duzib114G0052 Durio zibethinus HOM05D006601 ORTHO05D008281 8.4e-18 94.4 110 55.5
Prupe.5G030400 Prunus persica HOM05D006601 ORTHO05D008281 8.4e-18 94.4 97 55.7
Sed0022988 Sechium edule HOM05D006601 ORTHO05D008281 8.4e-18 94.4 57 78.9
Gohir.A05G287400 Gossypium hirsutum HOM05D006601 ORTHO05D008281 1.1e-17 94.0 108 55.6
PGSC0003DMG400023966 Solanum tuberosum HOM05D006601 ORTHO05D008281 1.1e-17 94.0 105 55.2
Solyc11g006760.3 Solanum lycopersicum HOM05D006601 ORTHO05D008281 1.4e-17 93.6 104 55.8
CAN.G1417.5 Capsicum annuum HOM05D006601 ORTHO05D008281 1.9e-17 93.2 104 54.8
AUR62041519 Chenopodium quinoa HOM05D006601 ORTHO05D008281 1.9e-17 93.2 57 78.9
THA.LOC104823558 Tarenaya hassleriana HOM05D006601 ORTHO05D008281 1.9e-17 93.2 104 53.8
Thecc.10G114200 Theobroma cacao HOM05D006601 ORTHO05D008281 1.9e-17 93.2 113 49.6
AUR62042084 Chenopodium quinoa HOM05D006601 ORTHO05D008281 2.4e-17 92.8 99 56.6
Gorai.009G303600 Gossypium raimondii HOM05D006601 ORTHO05D008281 2.4e-17 92.8 109 54.1
RcHm_v2.0_Chr2g0160691 Rosa chinensis HOM05D006601 ORTHO05D008281 2.4e-17 92.8 66 69.7
Sopen11g002690 Solanum pennellii HOM05D006601 ORTHO05D008281 2.4e-17 92.8 104 51.9
TPR.G31604 Trifolium pratense HOM05D006601 ORTHO05D008281 3.2e-17 92.4 52 84.6
Gohir.D05G288500 Gossypium hirsutum HOM05D006601 ORTHO05D008281 4.2e-17 92.0 108 54.6
Dinv12840 Davidia involucrata HOM05D006601 ORTHO05D008281 5.4e-17 91.7 101 55.4
SalBow3G0796 Salvia bowleyana HOM05D006601 ORTHO05D008281 5.4e-17 91.7 114 49.1
COL.COLO4_03655 Corchorus olitorius HOM05D006601 ORTHO05D008281 7.1e-17 91.3 105 53.3
MSTRG.9054 Avicennia marina HOM05D006601 ORTHO05D008281 9.3e-17 90.9 93 55.9
CARHR161980 Cardamine hirsuta HOM05D006601 ORTHO05D008281 9.3e-17 90.9 111 52.3
SGA_v2.0_scaffold62G21313 Striga asiatica HOM05D006601 ORTHO05D008281 9.3e-17 90.9 96 56.2
unitig_899.g14469 Utricularia gibba HOM05D006601 ORTHO05D008281 9.3e-17 90.9 108 50.0
Eucgr.J00269 Eucalyptus grandis HOM05D006601 ORTHO05D008281 1.2e-16 90.5 78 64.1
Peaxi162Scf00125g00234 Petunia axillaris HOM05D006601 ORTHO05D008281 1.2e-16 90.5 98 53.1
PGR044G2546 Punica granatum HOM05D006601 ORTHO05D008281 1.2e-16 90.5 103 52.4
TWI63G1188 Tripterygium wilfordii HOM05D006601 ORTHO05D008281 1.2e-16 90.5 58 74.1
AL5G32810 Arabidopsis lyrata HOM05D006601 ORTHO05D008281 1.6e-16 90.1 111 52.3
Carub.0005s1858 Capsella rubella HOM05D006601 ORTHO05D008281 1.6e-16 90.1 111 51.4
Nitab4.5_0009484g0010 Nicotiana tabacum HOM05D006601 ORTHO05D008281 1.6e-16 90.1 101 54.5
Migut.F00866 Erythranthe guttata HOM05D006601 ORTHO05D008281 4.6e-16 88.6 105 55.2
Thhalv10010678m.g Eutrema salsugineum HOM05D006601 ORTHO05D008281 6.0e-16 88.2 102 52.9
BcaC07g39592 Brassica carinata HOM05D006601 ORTHO05D008281 2.3e-15 86.3 117 48.7
C08p27460 Brassica napus HOM05D006601 ORTHO05D008281 2.3e-15 86.3 117 48.7
BolC8t50363H Brassica oleracea HOM05D006601 ORTHO05D008281 2.3e-15 86.3 117 48.7
Sp5g10040 Schrenkiella parvula HOM05D006601 ORTHO05D008281 3.0e-15 85.9 102 52.9
FAN20G1775 Fragaria x ananassa HOM05D006601 ORTHO05D008281 3.9e-15 85.5 101 56.4
AT3G52220 Arabidopsis thaliana HOM05D006601 ORTHO05D008281 5.1e-15 85.1 102 52.0
CiPaw.14G033700 Carya illinoinensis HOM05D006601 ORTHO05D008281 5.1e-15 85.1 52 80.8
A09p45280 Brassica napus HOM05D006601 ORTHO05D008281 6.6e-15 84.7 115 50.4
BraA09t39991Z Brassica rapa HOM05D006601 ORTHO05D008281 6.6e-15 84.7 115 50.4
Ciclev10016593m.g Citrus clementina HOM05D006601 ORTHO05D008281 6.6e-15 84.7 85 56.5
Aqoxy2G01116 Aquilegia oxysepala HOM05D006601 ORTHO05D008281 1.5e-14 83.6 85 57.6
FAN15G0841 Fragaria x ananassa HOM05D006601 ORTHO05D008281 5.6e-14 81.6 97 54.6
Aa31LG10G7330 Aethionema arabicum HOM05D006601 ORTHO05D008281 7.3e-14 81.3 56 71.4
ATR0776G086 Amborella trichopoda HOM05D006601 ORTHO05D008281 2.8e-13 79.3 106 47.2
Lsat_1_v5_gn_4_8660 Lactuca sativa HOM05D006601 ORTHO05D008281 4.8e-13 78.6 55 69.1
SEGI_26123 Sequoiadendron giganteum HOM05D006601 ORTHO05D008281 2.4e-12 76.3 74 52.7
Hma1.2p1_1491F.1_g286720 Hydrangea macrophylla HOM05D006601 ORTHO05D008281 1.4e-09 67.0 37 83.8
Pp3c1_22490 Physcomitrium patens HOM05D006601 ORTHO05D008281 7.1e-09 64.7 79 44.3
SMO367G0990 Selaginella moellendorffii HOM05D006601 ORTHO05D008281 2.1e-08 63.2 52 61.5
Mapoly0044s0087 Marchantia polymorpha HOM05D006601 ORTHO05D008281 1.9e-06 56.6 73 37.0
AagrBONN_evm.TU.Sc2ySwM_228.2727 Anthoceros agrestis HOM05D006601 ORTHO05D008281 4.3e-06 55.5 101 36.6


User provided reference genes

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