Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb035340 Zea mays HOM05D006984 ORTHO05D008773 5.5e-122 441.0 232 100.0
Os08g0512500 Oryza sativa ssp. japonica HOM05D006984 ORTHO05D008773 2.1e-49 199.9 151 74.2
GSVIVG01013427001 Vitis vinifera HOM05D006984 ORTHO05D008773 2.4e-37 159.8 187 52.9
EL10Ac1g01871 Beta vulgaris HOM05D006984 ORTHO05D008773 3.2e-37 159.5 181 56.4
Potri.005G256600 Populus trichocarpa HOM05D006984 ORTHO05D008773 2.1e-36 156.8 127 66.9
Cfa014138 Carpinus fangiana HOM05D006984 ORTHO05D008773 2.7e-36 156.4 143 58.0
Manes.05G127800 Manihot esculenta HOM05D006984 ORTHO05D008773 6.0e-36 155.2 141 59.6
Haze_22863 Corylus avellana HOM05D006984 ORTHO05D008773 7.9e-36 154.8 143 58.0
AUR62024096 Chenopodium quinoa HOM05D006984 ORTHO05D008773 1.8e-35 153.7 189 51.3
AUR62035170 Chenopodium quinoa HOM05D006984 ORTHO05D008773 1.8e-35 153.7 192 50.0
ECA232G4329 Erigeron canadensis HOM05D006984 ORTHO05D008773 3.0e-35 152.9 147 55.8
Lsat_1_v5_gn_9_48361 Lactuca sativa HOM05D006984 ORTHO05D008773 3.0e-35 152.9 141 57.4
Nn6g31626 Nelumbo nucifera HOM05D006984 ORTHO05D008773 1.5e-34 150.6 135 59.3
Sabra05G0198700 Salix brachista HOM05D006984 ORTHO05D008773 1.5e-34 150.6 135 60.0
Dinv13757 Davidia involucrata HOM05D006984 ORTHO05D008773 3.3e-34 149.4 137 61.3
TAR628G1538 Trochodendron aralioides HOM05D006984 ORTHO05D008773 3.3e-34 149.4 148 55.4
Lj4A811G120 Lonicera japonica HOM05D006984 ORTHO05D008773 5.6e-34 148.7 101 69.3
QL02p015743 Quercus lobata HOM05D006984 ORTHO05D008773 5.6e-34 148.7 148 54.7
Cpa.g.sc26.14 Carica papaya HOM05D006984 ORTHO05D008773 7.4e-34 148.3 143 53.1
Lj3P797T41 Lonicera japonica HOM05D006984 ORTHO05D008773 7.4e-34 148.3 107 66.4
Thecc.08G099800 Theobroma cacao HOM05D006984 ORTHO05D008773 7.4e-34 148.3 135 56.3
vmacro21767 Vaccinium macrocarpon HOM05D006984 ORTHO05D008773 7.4e-34 148.3 141 54.6
Eucgr.F01822 Eucalyptus grandis HOM05D006984 ORTHO05D008773 1.3e-33 147.5 147 55.1
Hma1.2p1_0489F.1_g164090 Hydrangea macrophylla HOM05D006984 ORTHO05D008773 1.3e-33 147.5 162 53.1
TWI56G0056 Tripterygium wilfordii HOM05D006984 ORTHO05D008773 1.3e-33 147.5 185 48.1
Cc10_g00260 Coffea canephora HOM05D006984 ORTHO05D008773 2.1e-33 146.7 144 54.9
Phvul.009G008400 Phaseolus vulgaris HOM05D006984 ORTHO05D008773 2.1e-33 146.7 181 47.0
Sc15g0004070 Simmondsia chinensis HOM05D006984 ORTHO05D008773 2.1e-33 146.7 99 69.7
HanXRQChr09g0241901 Helianthus annuus HOM05D006984 ORTHO05D008773 2.8e-33 146.4 144 53.5
CSS0020436 Camellia sinensis var. sinensis HOM05D006984 ORTHO05D008773 4.8e-33 145.6 135 56.3
CANSAT25G0748 Cannabis sativa HOM05D006984 ORTHO05D008773 8.2e-33 144.8 185 47.6
VMungo1309G1928 Vigna mungo HOM05D006984 ORTHO05D008773 8.2e-33 144.8 154 52.6
MBI04_g31208_MAGBIO Magnolia biondii HOM05D006984 ORTHO05D008773 1.1e-32 144.4 146 52.1
SGA_v2.0_scaffold220G42646 Striga asiatica HOM05D006984 ORTHO05D008773 1.4e-32 144.1 136 54.4
MD16G1283100 Malus domestica HOM05D006984 ORTHO05D008773 2.4e-32 143.3 134 57.5
Oeu035863.2 Olea europaea HOM05D006984 ORTHO05D008773 3.1e-32 142.9 127 56.7
Carub.0002s2337 Capsella rubella HOM05D006984 ORTHO05D008773 5.3e-32 142.1 135 54.8
CiPaw.07G133500 Carya illinoinensis HOM05D006984 ORTHO05D008773 5.3e-32 142.1 145 53.8
Actinidia17077 Actinidia chinensis HOM05D006984 ORTHO05D008773 9.0e-32 141.4 135 55.6
AL2G36590 Arabidopsis lyrata HOM05D006984 ORTHO05D008773 1.2e-31 141.0 148 51.4
MSTRG.24516 Avicennia marina HOM05D006984 ORTHO05D008773 1.2e-31 141.0 147 53.7
AT1G76450 Arabidopsis thaliana HOM05D006984 ORTHO05D008773 1.5e-31 140.6 179 44.1
arahy.Tifrunner.gnm1.ann1.H7AW2T Arachis hypogaea HOM05D006984 ORTHO05D008773 2.0e-31 140.2 129 57.4
THA.LOC104813736 Tarenaya hassleriana HOM05D006984 ORTHO05D008773 2.0e-31 140.2 197 44.2
CARHR070010 Cardamine hirsuta HOM05D006984 ORTHO05D008773 2.6e-31 139.8 148 52.0
Migut.N02987 Erythranthe guttata HOM05D006984 ORTHO05D008773 2.6e-31 139.8 127 55.9
Lj1g0018204 Lotus japonicus HOM05D006984 ORTHO05D008773 3.4e-31 139.4 146 50.0
arahy.Tifrunner.gnm1.ann1.QT2TB5 Arachis hypogaea HOM05D006984 ORTHO05D008773 4.5e-31 139.0 129 56.6
Sp5g31620 Schrenkiella parvula HOM05D006984 ORTHO05D008773 5.8e-31 138.7 136 54.4
Atru.chr13.60 Acer truncatum HOM05D006984 ORTHO05D008773 7.6e-31 138.3 138 52.9
Duzib116G0393 Durio zibethinus HOM05D006984 ORTHO05D008773 7.6e-31 138.3 132 53.8
Sed0024892 Sechium edule HOM05D006984 ORTHO05D008773 7.6e-31 138.3 114 60.5
ATR0001G027 Amborella trichopoda HOM05D006984 ORTHO05D008773 1.0e-30 137.9 181 46.4
BcaC08g47243 Brassica carinata HOM05D006984 ORTHO05D008773 1.0e-30 137.9 136 54.4
Hund01834 Selenicereus undatus HOM05D006984 ORTHO05D008773 1.0e-30 137.9 107 59.8
Aa31LG4G6540 Aethionema arabicum HOM05D006984 ORTHO05D008773 1.3e-30 137.5 201 46.8
CsaV3_6G035930 Cucumis sativus L. HOM05D006984 ORTHO05D008773 1.3e-30 137.5 134 53.0
FAN18G2056 Fragaria x ananassa HOM05D006984 ORTHO05D008773 1.3e-30 137.5 135 53.3
RcHm_v2.0_Chr7g0216691 Rosa chinensis HOM05D006984 ORTHO05D008773 1.3e-30 137.5 136 53.7
MELO3C026518.2 Cucumis melo HOM05D006984 ORTHO05D008773 1.7e-30 137.1 134 53.7
Ciclev10001894m.g Citrus clementina HOM05D006984 ORTHO05D008773 2.9e-30 136.3 157 47.1
A07p42120 Brassica napus HOM05D006984 ORTHO05D008773 3.8e-30 136.0 149 51.7
Glyma.06G014500 Glycine max HOM05D006984 ORTHO05D008773 3.8e-30 136.0 154 50.6
TPR.G38185 Trifolium pratense HOM05D006984 ORTHO05D008773 3.8e-30 136.0 183 42.6
C06p50690 Brassica napus HOM05D006984 ORTHO05D008773 6.5e-30 135.2 136 53.7
BolC6t40095H Brassica oleracea HOM05D006984 ORTHO05D008773 6.5e-30 135.2 136 53.7
BraA07t31741Z Brassica rapa HOM05D006984 ORTHO05D008773 6.5e-30 135.2 181 46.4
Peaxi162Scf00064g01321 Petunia axillaris HOM05D006984 ORTHO05D008773 6.5e-30 135.2 127 54.3
CAN.G208.41 Capsicum annuum HOM05D006984 ORTHO05D008773 8.4e-30 134.8 143 51.0
FvH4_5g26100 Fragaria vesca HOM05D006984 ORTHO05D008773 1.1e-29 134.4 135 52.6
Medtr3g116110 Medicago truncatula HOM05D006984 ORTHO05D008773 1.1e-29 134.4 141 50.4
CDE05G0055 Ceratophyllum demersum HOM05D006984 ORTHO05D008773 1.9e-29 133.7 103 59.2
Prupe.5G005500 Prunus persica HOM05D006984 ORTHO05D008773 2.5e-29 133.3 135 55.6
unitig_22.g5726 Utricularia gibba HOM05D006984 ORTHO05D008773 2.5e-29 133.3 138 53.6
CDE05G2674 Ceratophyllum demersum HOM05D006984 ORTHO05D008773 3.2e-29 132.9 201 42.3
Psat5g008560 Pisum sativum HOM05D006984 ORTHO05D008773 3.2e-29 132.9 174 42.5
BcaC08g47152 Brassica carinata HOM05D006984 ORTHO05D008773 4.2e-29 132.5 188 44.1
PGSC0003DMG400029399 Solanum tuberosum HOM05D006984 ORTHO05D008773 4.2e-29 132.5 127 54.3
Sopen12g031620 Solanum pennellii HOM05D006984 ORTHO05D008773 5.5e-29 132.1 127 52.8
Aqoxy6G02992 Aquilegia oxysepala HOM05D006984 ORTHO05D008773 7.1e-29 131.7 143 49.7
ClCG08G009180 Citrullus lanatus HOM05D006984 ORTHO05D008773 7.1e-29 131.7 174 46.0
Solyc12g094720.3 Solanum lycopersicum HOM05D006984 ORTHO05D008773 7.1e-29 131.7 177 44.1
Nitab4.5_0000407g0010 Nicotiana tabacum HOM05D006984 ORTHO05D008773 9.3e-29 131.3 112 57.1
Rhsim06G0003200 Rhododendron simsii HOM05D006984 ORTHO05D008773 1.6e-28 130.6 166 47.6
Glyma.04G014500 Glycine max HOM05D006984 ORTHO05D008773 2.1e-28 130.2 177 45.2
Ca_15385_v3 Cicer arietinum L. HOM05D006984 ORTHO05D008773 3.5e-28 129.4 152 45.4
COL.COLO4_12298 Corchorus olitorius HOM05D006984 ORTHO05D008773 1.8e-27 127.1 136 50.7
FAN08G1099 Fragaria x ananassa HOM05D006984 ORTHO05D008773 1.1e-26 124.4 135 51.1
PSO541G1597 Papaver somniferum HOM05D006984 ORTHO05D008773 1.1e-26 124.4 203 40.9
Hma1.2p1_0489F.1_g164100 Hydrangea macrophylla HOM05D006984 ORTHO05D008773 4.3e-26 122.5 81 72.8
Thhalv10019042m.g Eutrema salsugineum HOM05D006984 ORTHO05D008773 7.4e-26 121.7 193 44.6
Gohir.D01G180900 Gossypium hirsutum HOM05D006984 ORTHO05D008773 9.7e-26 121.3 135 51.9
Gorai.002G221600 Gossypium raimondii HOM05D006984 ORTHO05D008773 1.3e-25 120.9 135 51.9
Gohir.A01G188600 Gossypium hirsutum HOM05D006984 ORTHO05D008773 1.6e-25 120.6 135 51.9
FAN13G1472 Fragaria x ananassa HOM05D006984 ORTHO05D008773 2.8e-25 119.8 181 41.4
PGR083G2821 Punica granatum HOM05D006984 ORTHO05D008773 4.8e-25 119.0 82 74.4
Pp3c4_15070 Physcomitrium patens HOM05D006984 ORTHO05D008773 1.4e-24 117.5 156 42.3
Mapoly0008s0218 Marchantia polymorpha HOM05D006984 ORTHO05D008773 6.9e-24 115.2 130 47.7
Lalb_Chr23g0265511 Lupinus albus HOM05D006984 ORTHO05D008773 1.5e-23 114.0 140 50.7
AagrBONN_evm.TU.Sc2ySwM_117.1863 Anthoceros agrestis HOM05D006984 ORTHO05D008773 4.5e-23 112.5 135 47.4
FAN04G1410 Fragaria x ananassa HOM05D006984 ORTHO05D008773 2.2e-22 110.2 138 47.8
SMO245G0004 Selaginella moellendorffii HOM05D006984 ORTHO05D008773 8.8e-19 98.2 165 40.0
PGSC0003DMG400021762 Solanum tuberosum HOM05D006984 ORTHO05D008773 1.9e-18 97.1 79 59.5
CBR_g51937 Chara braunii HOM05D006984 ORTHO05D008773 2.2e-17 93.6 113 44.2
Ah.11g041950 Amaranthus hybridus HOM05D006984 ORTHO05D008773 5.3e-16 89.0 52 82.7
Nitab4.5_0003423g0020 Nicotiana tabacum HOM05D006984 ORTHO05D008773 9.1e-16 88.2 127 42.5
Sopen12g026780 Solanum pennellii HOM05D000004 ORTHO05D000002 7.7e-15 85.1 78 55.1
PGSC0003DMG400008742 Solanum tuberosum HOM05D006984 ORTHO05D008773 6.5e-14 82.0 102 45.1
PRCOL_00004638 Prasinoderma coloniale HOM05D006984 ORTHO05D008773 4.2e-13 79.3 109 43.1
HPP92_015474 Vanilla planifolia HOM05D006984 ORTHO05D008773 1.7e-09 67.4 51 64.7
Cre10.g446350 Chlamydomonas reinhardtii HOM05D006984 ORTHO05D008773 2.8e-09 66.6 170 32.4
MCO13G452 Micromonas commoda HOM05D006984 ORTHO05D008773 4.5e-07 59.3 154 33.8


User provided reference genes

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