Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb033700 Zea mays HOM05D002413 ORTHO05D002638 2.2e-41 172.6 139 100.0
Zm00001eb199300 Zea mays HOM05D002413 ORTHO05D002638 1.0e-22 110.5 52 98.1
Os08g0490300 Oryza sativa ssp. japonica HOM05D002413 ORTHO05D002638 9.9e-18 94.0 48 91.7
Zm00001eb033690 Zea mays HOM05D002413 ORTHO05D002638 9.3e-16 87.4 49 83.7
HPP92_017967 Vanilla planifolia HOM05D002413 ORTHO05D002638 3.8e-09 65.5 45 68.9
A10p12980 Brassica napus HOM05D002413 ORTHO05D002638 2.7e-07 59.3 46 63.0
MSTRG.15794 Avicennia marina HOM05D002413 ORTHO05D002638 4.6e-07 58.5 45 66.7
Lalb_Chr15g0082111 Lupinus albus HOM05D002413 ORTHO05D002638 7.9e-07 57.8 46 65.2
Lalb_Chr20g0114001 Lupinus albus HOM05D002413 ORTHO05D002638 7.9e-07 57.8 46 65.2
Lalb_Chr20g0114031 Lupinus albus HOM05D002413 ORTHO05D002638 7.9e-07 57.8 46 65.2
BcaB08g35930 Brassica carinata HOM05D002413 ORTHO05D002638 1.3e-06 57.0 47 63.8
BcaC04g20206 Brassica carinata HOM05D002413 ORTHO05D002638 1.3e-06 57.0 46 60.9
C09p46690 Brassica napus HOM05D002413 ORTHO05D002638 1.3e-06 57.0 46 60.9
BolC9t57519H Brassica oleracea HOM05D002413 ORTHO05D002638 1.3e-06 57.0 46 60.9
BraA10t43392Z Brassica rapa HOM05D002413 ORTHO05D002638 1.3e-06 57.0 46 60.9
Sc07g0002300 Simmondsia chinensis HOM05D002413 ORTHO05D002638 1.3e-06 57.0 51 64.7
Actinidia05010 Actinidia chinensis HOM05D002413 ORTHO05D002638 1.7e-06 56.6 45 64.4
Medtr3g059000 Medicago truncatula HOM05D002413 ORTHO05D002638 2.3e-06 56.2 46 63.0
Phvul.006G057100 Phaseolus vulgaris HOM05D002413 ORTHO05D002638 2.3e-06 56.2 46 63.0
Psat5g169000 Pisum sativum HOM05D002413 ORTHO05D002638 2.3e-06 56.2 46 63.0
TWI39G1150 Tripterygium wilfordii HOM05D002413 ORTHO05D002638 2.3e-06 56.2 56 58.9
GSVIVG01014675001 Vitis vinifera HOM05D002413 ORTHO05D002638 2.3e-06 56.2 45 64.4
arahy.Tifrunner.gnm1.ann1.BMQ6HD Arachis hypogaea HOM05D002413 ORTHO05D002638 3.0e-06 55.8 45 64.4
Ca_22138_v3 Cicer arietinum L. HOM05D002413 ORTHO05D002638 3.0e-06 55.8 45 64.4
Dinv40855 Davidia involucrata HOM05D002413 ORTHO05D002638 3.0e-06 55.8 45 64.4
Migut.M01656 Erythranthe guttata HOM05D002413 ORTHO05D002638 3.0e-06 55.8 46 63.0
Glyma.08G329400 Glycine max HOM05D002413 ORTHO05D002638 3.0e-06 55.8 48 64.6
Glyma.08G329500 Glycine max HOM05D002413 ORTHO05D002638 3.0e-06 55.8 46 67.4
Lj6g0021071 Lotus japonicus HOM05D002413 ORTHO05D002638 3.0e-06 55.8 45 64.4
Lj6g0025765 Lotus japonicus HOM05D002413 ORTHO05D002638 3.0e-06 55.8 45 64.4
Lalb_Chr15g0082051 Lupinus albus HOM05D002413 ORTHO05D002638 3.0e-06 55.8 46 63.0
EL10Ac4g07574 Beta vulgaris HOM05D002413 ORTHO05D002638 3.9e-06 55.5 45 64.4
Duzib205G0891 Durio zibethinus HOM05D002413 ORTHO05D002638 3.9e-06 55.5 39 69.2
TAR629G2256 Trochodendron aralioides HOM05D002413 ORTHO05D002638 5.1e-06 55.1 39 69.2
CSS0033067 Camellia sinensis var. sinensis HOM05D002413 ORTHO05D002638 8.7e-06 54.3 43 62.8
Glyma.18G077300 Glycine max HOM05D002413 ORTHO05D002638 8.7e-06 54.3 48 62.5
Glyma.18G077400 Glycine max HOM05D002413 ORTHO05D002638 8.7e-06 54.3 48 62.5
Gohir.A12G179500 Gossypium hirsutum HOM05D002413 ORTHO05D002638 8.7e-06 54.3 39 66.7
Gorai.008G195400 Gossypium raimondii HOM05D002413 ORTHO05D002638 8.7e-06 54.3 39 66.7
Hma1.2p1_1402F.1_g281150 Hydrangea macrophylla HOM05D002413 ORTHO05D002638 8.7e-06 54.3 46 65.2
THA.LOC104813448 Tarenaya hassleriana HOM05D002413 ORTHO05D002638 8.7e-06 54.3 39 66.7
TPR.G24142 Trifolium pratense HOM05D002413 ORTHO05D002638 8.7e-06 54.3 46 63.0


User provided reference genes

Program Settings