Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb030820 Zea mays HOM05D000115 ORTHO05D003511 1.6e-55 219.2 106 100.0
Zm00001eb035360 Zea mays HOM05D000115 ORTHO05D003511 7.3e-13 77.4 47 83.0
Os08g0513000 Oryza sativa ssp. japonica HOM05D000115 ORTHO05D003511 1.1e-11 73.6 47 78.7
GSVIVG01026440001 Vitis vinifera HOM05D000835 ORTHO05D007655 1.6e-07 59.7 49 61.2
Solyc12g006100.2 Solanum lycopersicum HOM05D000176 ORTHO05D000106 3.5e-07 58.5 39 71.8
Sopen12g002060 Solanum pennellii HOM05D000176 ORTHO05D003511 3.5e-07 58.5 39 71.8
CSS0040979 Camellia sinensis var. sinensis HOM05D000115 ORTHO05D003511 7.8e-07 57.4 39 69.2
CSS0043751 Camellia sinensis var. sinensis HOM05D000115 ORTHO05D003511 7.8e-07 57.4 39 69.2
Peaxi162Scf00038g02647 Petunia axillaris HOM05D000115 ORTHO05D003511 7.8e-07 57.4 49 61.2
QL01p019305 Quercus lobata HOM05D000115 ORTHO05D003511 7.8e-07 57.4 45 60.0
Peaxi162Scf00981g00421 Petunia axillaris HOM05D000115 ORTHO05D003511 1.0e-06 57.0 39 71.8
QL09p003987 Quercus lobata HOM05D000176 ORTHO05D003511 1.7e-06 56.2 45 55.6
MBI01_g22972_MAGBIO Magnolia biondii HOM05D000115 ORTHO05D003511 2.3e-06 55.8 53 56.6
Nitab4.5_0000855g0170 Nicotiana tabacum HOM05D000115 ORTHO05D003511 2.3e-06 55.8 39 69.2
Nitab4.5_0003141g0070 Nicotiana tabacum HOM05D000115 ORTHO05D003511 3.0e-06 55.5 39 69.2
Dinv40223 Davidia involucrata HOM05D000534 ORTHO05D003511 3.9e-06 55.1 46 63.0
Solyc02g082230.4 Solanum lycopersicum HOM05D000115 ORTHO05D003511 3.9e-06 55.1 35 77.1
Sopen02g026890 Solanum pennellii HOM05D000115 ORTHO05D003511 3.9e-06 55.1 35 77.1
Actinidia17142 Actinidia chinensis HOM05D000115 ORTHO05D003511 5.1e-06 54.7 47 63.8
PGSC0003DMG400013661 Solanum tuberosum HOM05D000115 ORTHO05D003511 5.1e-06 54.7 35 74.3
unitig_0.g2634 Utricularia gibba HOM05D000115 ORTHO05D003511 5.1e-06 54.7 49 59.2
Actinidia22860 Actinidia chinensis HOM05D000115 ORTHO05D003511 6.6e-06 54.3 47 63.8
Ah.02g123230 Amaranthus hybridus HOM05D000115 ORTHO05D003511 6.6e-06 54.3 46 63.0
SGA_v2.0_scaffold132G34571 Striga asiatica HOM05D000115 ORTHO05D003511 6.6e-06 54.3 49 59.2
Cc03_g15950 Coffea canephora HOM05D000176 ORTHO05D003511 8.6e-06 53.9 39 59.0
Oeu045755.1 Olea europaea HOM05D000115 ORTHO05D003511 8.6e-06 53.9 49 59.2
Psat4g107160 Pisum sativum HOM05D000115 ORTHO05D003511 8.6e-06 53.9 44 61.4
SHI21148 Sapria himalayana HOM05D000115 ORTHO05D003511 8.6e-06 53.9 35 74.3
HPP92_015729 Vanilla planifolia HOM05D000115 ORTHO05D003511 8.6e-06 53.9 38 68.4


User provided reference genes

Program Settings