Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb027500 Zea mays HOM05D001338 ORTHO05D001239 1.0e-131 473.4 237 100.0
Zm00001eb077850 Zea mays HOM05D001338 ORTHO05D001239 4.2e-69 265.4 236 60.2
BolC2t08893H Brassica oleracea HOM05D001338 ORTHO05D001239 1.1e-53 214.2 185 53.5
Zm00001eb237490 Zea mays HOM05D001338 ORTHO05D001239 9.5e-53 211.1 210 50.5
Oeu012605.1 Olea europaea HOM05D001338 ORTHO05D001239 7.0e-48 194.9 205 48.3
CSS0006650 Camellia sinensis var. sinensis HOM05D001338 ORTHO05D001239 2.5e-45 186.4 159 56.6
Zm00001eb109540 Zea mays HOM05D001338 ORTHO05D001239 2.5e-45 186.4 174 57.5
Zm00001eb123550 Zea mays HOM05D001338 ORTHO05D001239 2.5e-45 186.4 174 57.5
Zm00001eb125380 Zea mays HOM05D001338 ORTHO05D001239 2.5e-45 186.4 174 57.5
Zm00001eb152380 Zea mays HOM05D001338 ORTHO05D001239 2.5e-45 186.4 174 57.5
RcHm_v2.0_Chr7g0198811 Rosa chinensis HOM05D001338 ORTHO05D001239 3.3e-45 186.0 207 46.9
CSS0027088 Camellia sinensis var. sinensis HOM05D001338 ORTHO05D001239 1.2e-44 184.1 196 50.0
CSS0047876 Camellia sinensis var. sinensis HOM05D001338 ORTHO05D001239 2.3e-43 179.9 194 49.5
Zm00001eb311200 Zea mays HOM05D001338 ORTHO05D001239 1.5e-42 177.2 104 88.5
TWI31G1167 Tripterygium wilfordii HOM05D001338 ORTHO05D001239 5.8e-42 175.3 241 40.7
TWI31G0800 Tripterygium wilfordii HOM05D001338 ORTHO05D001239 7.5e-42 174.9 241 41.1
FvH4_4g01531 Fragaria vesca HOM05D001338 ORTHO05D001239 9.8e-42 174.5 240 45.0
TWI74G0957 Tripterygium wilfordii HOM05D001338 ORTHO05D001239 2.9e-41 172.9 241 40.2
CANSAT21G2437 Cannabis sativa HOM05D001338 ORTHO05D001239 3.7e-41 172.6 183 50.3
CANSAT21G0118 Cannabis sativa HOM05D001338 ORTHO05D001239 4.9e-41 172.2 183 49.7
TWI18G0851 Tripterygium wilfordii HOM05D001338 ORTHO05D001239 4.9e-41 172.2 211 43.6
CSS0005716 Camellia sinensis var. sinensis HOM05D001338 ORTHO05D001239 3.2e-40 169.5 149 55.7
AUR62026124 Chenopodium quinoa HOM05D001338 ORTHO05D001239 4.6e-39 165.6 170 52.9
MD01G1087700 Malus domestica HOM05D001113 ORTHO05D000968 1.7e-38 163.7 143 55.2
Gohir.D06G166250 Gossypium hirsutum HOM05D001338 ORTHO05D001239 3.9e-38 162.5 180 48.9
CANSAT35G0728 Cannabis sativa HOM05D001338 ORTHO05D001239 5.0e-38 162.2 200 45.0
PSO210G1522 Papaver somniferum HOM05D001338 ORTHO05D001239 5.0e-38 162.2 225 44.4
CANSAT11G1935 Cannabis sativa HOM05D001338 ORTHO05D001239 6.6e-38 161.8 203 44.3
Thhalv10009558m.g Eutrema salsugineum HOM05D001338 ORTHO05D001239 1.5e-37 160.6 161 49.1
Thhalv10009736m.g Eutrema salsugineum HOM05D001338 ORTHO05D001239 1.5e-37 160.6 161 49.1
FvH4_1g08761 Fragaria vesca HOM05D001338 ORTHO05D001239 3.3e-37 159.5 161 51.6
PSO478G0891 Papaver somniferum HOM05D001338 ORTHO05D001239 3.3e-37 159.5 177 44.6
Glyma.12G093566 Glycine max HOM05D001338 ORTHO05D001239 4.3e-37 159.1 143 54.5
PSO761G0174 Papaver somniferum HOM05D001338 ORTHO05D001239 4.3e-37 159.1 177 44.1
HanXRQChr11g0321041 Helianthus annuus HOM05D001338 ORTHO05D001239 9.5e-37 157.9 161 47.2
FvH4_5g30891 Fragaria vesca HOM05D001338 ORTHO05D001239 1.2e-36 157.5 161 50.9
PSO210G0436 Papaver somniferum HOM05D001338 ORTHO05D001239 2.1e-36 156.8 161 46.0
PSO170G2214 Papaver somniferum HOM05D001338 ORTHO05D001239 2.8e-36 156.4 155 50.3
PSO478G1760 Papaver somniferum HOM05D001338 ORTHO05D001239 2.8e-36 156.4 155 50.3
PSO478G4662 Papaver somniferum HOM05D001338 ORTHO05D001239 2.8e-36 156.4 155 50.3
PSO541G2490 Papaver somniferum HOM05D001338 ORTHO05D001239 3.6e-36 156.0 156 47.4
PSO104G0173 Papaver somniferum HOM05D001338 ORTHO05D001239 4.7e-36 155.6 177 43.5
Oeu003234.1 Olea europaea HOM05D001338 ORTHO05D001239 8.0e-36 154.8 167 47.9
PSO764G0071 Papaver somniferum HOM05D001338 ORTHO05D001239 8.0e-36 154.8 155 49.7
Oeu028129.1 Olea europaea HOM05D001338 ORTHO05D001239 1.4e-35 154.1 168 45.2
PSO144G0149 Papaver somniferum HOM05D001338 ORTHO05D001239 1.4e-35 154.1 155 49.7
PSO541G0488 Papaver somniferum HOM05D001338 ORTHO05D001239 1.4e-35 154.1 205 40.5
Medtr4g010145 Medicago truncatula HOM05D001338 ORTHO05D016692 1.8e-35 153.7 148 52.0
PSO063G4296 Papaver somniferum HOM05D001338 ORTHO05D001239 1.8e-35 153.7 159 47.8
Glyma.14G107400 Glycine max HOM05D001338 ORTHO05D001239 2.3e-35 153.3 241 39.8
PSO063G4981 Papaver somniferum HOM05D001338 ORTHO05D001239 2.3e-35 153.3 155 49.7
PSO170G1703 Papaver somniferum HOM05D001338 ORTHO05D001239 2.3e-35 153.3 177 42.4
Gohir.A06G101504 Gossypium hirsutum HOM05D001338 ORTHO05D001239 4.0e-35 152.5 165 44.8
PSO063G6584 Papaver somniferum HOM05D001338 ORTHO05D001239 4.0e-35 152.5 203 43.3
PSO541G1638 Papaver somniferum HOM05D001338 ORTHO05D001239 6.8e-35 151.8 233 39.1
PSO063G7197 Papaver somniferum HOM05D001338 ORTHO05D001239 1.5e-34 150.6 201 43.3
PSO832G4176 Papaver somniferum HOM05D001338 ORTHO05D001239 2.0e-34 150.2 151 50.3
PSO384G4132 Papaver somniferum HOM05D001338 ORTHO05D001239 3.4e-34 149.4 222 40.1
ECA232G0049 Erigeron canadensis HOM05D001338 ORTHO05D001239 4.4e-34 149.1 215 41.4
ECA236G1638 Erigeron canadensis HOM05D001338 ORTHO05D001239 5.8e-34 148.7 180 46.1
PSO675G8898 Papaver somniferum HOM05D001338 ORTHO05D001239 1.3e-33 147.5 246 37.4
PSO801G0680 Papaver somniferum HOM05D001338 ORTHO05D001239 2.2e-33 146.7 233 39.1
AL4G20870 Arabidopsis lyrata HOM05D001338 ORTHO05D001239 6.4e-33 145.2 137 53.3
Oeu008700.1 Olea europaea HOM05D001338 ORTHO05D001239 1.1e-32 144.4 157 45.2
PSO339G3749 Papaver somniferum HOM05D001338 ORTHO05D001239 2.4e-32 143.3 248 36.7
PSO063G3812 Papaver somniferum HOM05D001338 ORTHO05D001239 4.1e-32 142.5 173 46.8
PSO781G0133 Papaver somniferum HOM05D001338 ORTHO05D001239 4.1e-32 142.5 152 48.0
FvH4_6g47642 Fragaria vesca HOM05D001338 ORTHO05D001239 7.1e-32 141.7 145 49.0
HanXRQChr10g0286761 Helianthus annuus HOM05D001338 ORTHO05D001239 9.2e-32 141.4 160 46.9
Oeu029248.1 Olea europaea HOM05D001338 ORTHO05D001239 9.2e-32 141.4 144 52.1
PSO063G1472 Papaver somniferum HOM05D001338 ORTHO05D001239 9.2e-32 141.4 222 39.2
PSO478G0790 Papaver somniferum HOM05D001338 ORTHO05D001239 9.2e-32 141.4 205 39.5
MD02G1227000 Malus domestica HOM05D000696 ORTHO05D001239 2.1e-31 140.2 119 54.6
PSO017G0847 Papaver somniferum HOM05D001338 ORTHO05D001239 2.7e-31 139.8 144 50.7
PSO421G0097 Papaver somniferum HOM05D001338 ORTHO05D001239 2.7e-31 139.8 217 37.3
Oeu016868.1 Olea europaea HOM05D001338 ORTHO05D001239 3.5e-31 139.4 168 41.1
TWI73G0975 Tripterygium wilfordii HOM05D001338 ORTHO05D001239 3.5e-31 139.4 163 44.2
Thhalv10017956m.g Eutrema salsugineum HOM05D001338 ORTHO05D001239 7.8e-31 138.3 156 46.2
AT4G10200 Arabidopsis thaliana HOM05D001338 ORTHO05D001239 1.0e-30 137.9 201 38.8
Oeu063768.1 Olea europaea HOM05D001338 ORTHO05D001239 1.3e-30 137.5 168 41.1
PSO541G2431 Papaver somniferum HOM05D001338 ORTHO05D001239 1.3e-30 137.5 143 49.0
Oeu054316.1 Olea europaea HOM05D001338 ORTHO05D001239 3.0e-30 136.3 168 41.1
PSO541G5408 Papaver somniferum HOM05D001338 ORTHO05D001239 5.1e-30 135.6 137 46.7
PSO210G5802 Papaver somniferum HOM05D001338 ORTHO05D001239 6.6e-30 135.2 173 46.8
PSO478G0924 Papaver somniferum HOM05D001338 ORTHO05D001239 6.6e-30 135.2 182 44.0
Medtr5g056540 Medicago truncatula HOM05D001338 ORTHO05D001239 3.3e-29 132.9 164 44.5
CANSAT54G1040 Cannabis sativa HOM05D001338 ORTHO05D001239 2.8e-28 129.8 162 42.0
Sp4g09900 Schrenkiella parvula HOM05D001338 ORTHO05D001239 2.8e-28 129.8 169 42.0
Oeu042321.2 Olea europaea HOM05D001338 ORTHO05D001239 3.6e-28 129.4 157 42.0
PSO781G0216 Papaver somniferum HOM05D001338 ORTHO05D001239 6.2e-28 128.6 139 42.4
Aqoxy5G02339 Aquilegia oxysepala HOM05D001338 ORTHO05D001239 8.1e-28 128.3 127 50.4
CANSAT01G1009 Cannabis sativa HOM05D001338 ORTHO05D001239 1.5e-26 124.0 158 45.6
TWI74G0662 Tripterygium wilfordii HOM05D001338 ORTHO05D001239 5.8e-26 122.1 211 36.0
CANSAT64G1081 Cannabis sativa HOM05D001338 ORTHO05D001239 7.6e-26 121.7 162 40.1
Oeu063541.1 Olea europaea HOM05D001338 ORTHO05D001239 9.9e-26 121.3 138 45.7
PSO832G0837 Papaver somniferum HOM05D001338 ORTHO05D001239 1.3e-25 120.9 184 39.1
PSO832G0893 Papaver somniferum HOM05D001338 ORTHO05D001239 1.7e-25 120.6 162 43.2
CANSAT11G0800 Cannabis sativa HOM05D001338 ORTHO05D001239 3.7e-25 119.4 158 40.5
RcHm_v2.0_Chr1g0320361 Rosa chinensis HOM05D001338 ORTHO05D001239 3.7e-25 119.4 170 41.8
CARHR103200 Cardamine hirsuta HOM05D001338 ORTHO05D001239 4.9e-25 119.0 190 36.3
TPR.G34669 Trifolium pratense HOM05D001338 ORTHO05D001239 4.9e-25 119.0 174 40.2
Oeu056073.1 Olea europaea HOM05D001338 ORTHO05D001239 2.4e-24 116.7 124 41.9
PSO724G1235 Papaver somniferum HOM05D001338 ORTHO05D001239 5.4e-24 115.5 219 37.9
Oeu053421.1 Olea europaea HOM05D001338 ORTHO05D001239 3.5e-23 112.8 150 40.7
Oeu063134.1 Olea europaea HOM05D001338 ORTHO05D001239 3.5e-23 112.8 117 42.7
PSO801G0142 Papaver somniferum HOM05D001338 ORTHO05D001239 1.0e-22 111.3 204 38.7
PSO138G0010 Papaver somniferum HOM05D001338 ORTHO05D001239 3.9e-22 109.4 101 54.5
PSO210G4276 Papaver somniferum HOM05D001338 ORTHO05D001239 3.9e-22 109.4 110 49.1
TWI81G1066 Tripterygium wilfordii HOM05D001338 ORTHO05D001239 2.5e-21 106.7 102 51.0
Zm00001eb204510 Zea mays HOM05D001338 ORTHO05D001239 2.5e-21 106.7 64 70.3
AUR62037832 Chenopodium quinoa HOM05D001338 ORTHO05D001239 4.3e-21 105.9 145 43.4
FvH4_2g32571 Fragaria vesca HOM05D001338 ORTHO05D001239 4.3e-21 105.9 106 44.3
TWI74G1236 Tripterygium wilfordii HOM05D001338 ORTHO05D001239 4.3e-21 105.9 189 36.5
RcHm_v2.0_Chr7g0230921 Rosa chinensis HOM05D001338 ORTHO05D029707 1.6e-20 104.0 168 40.5
PSO384G2104 Papaver somniferum HOM05D001338 ORTHO05D001239 2.1e-20 103.6 110 46.4
RcHm_v2.0_Chr6g0308901 Rosa chinensis HOM05D001338 ORTHO05D001239 2.1e-20 103.6 80 60.0
PSO384G1931 Papaver somniferum HOM05D001338 ORTHO05D001239 2.8e-20 103.2 188 37.2
PSO724G0974 Papaver somniferum HOM05D001338 ORTHO05D001239 2.8e-20 103.2 202 33.7
Oeu048409.1 Olea europaea HOM05D001338 ORTHO05D001239 6.2e-20 102.1 105 43.8
PSO782G2576 Papaver somniferum HOM05D001338 ORTHO05D001239 2.4e-19 100.1 96 52.1
CANSAT46G0001 Cannabis sativa HOM05D001338 ORTHO05D001239 3.4e-18 96.3 163 35.0
Oeu006251.1 Olea europaea HOM05D001338 ORTHO05D001239 2.2e-17 93.6 170 33.5
Oeu064839.1 Olea europaea HOM05D001338 ORTHO05D001239 2.9e-17 93.2 77 50.6
CiPaw.04G075300 Carya illinoinensis HOM05D001338 ORTHO05D001239 1.9e-16 90.5 113 44.2
FvH4_1g10851 Fragaria vesca HOM05D001338 ORTHO05D001239 5.4e-16 89.0 155 36.1
TPR.G17453 Trifolium pratense HOM05D001338 ORTHO05D001239 1.2e-15 87.8 93 45.2
CANSAT54G1041 Cannabis sativa HOM05D001338 ORTHO05D001239 4.6e-15 85.9 167 32.9
TPR.G25675 Trifolium pratense HOM05D000006 ORTHO05D000001 1.0e-14 84.7 89 47.2
Oeu034167.1 Olea europaea HOM05D001338 ORTHO05D001239 2.3e-14 83.6 90 47.8
Oeu005280.1 Olea europaea HOM05D001338 ORTHO05D001239 3.9e-14 82.8 82 45.1
Oeu052557.1 Olea europaea HOM05D001338 ORTHO05D001239 5.1e-14 82.4 94 42.6
Sp6g08540 Schrenkiella parvula HOM05D001338 ORTHO05D001239 6.6e-14 82.0 161 35.4
Oeu023192.1 Olea europaea HOM05D001338 ORTHO05D001239 8.7e-14 81.6 88 44.3
CiPaw.15G122600 Carya illinoinensis HOM05D001338 ORTHO05D001239 1.9e-13 80.5 102 44.1
Medtr7g446190 Medicago truncatula HOM05D000132 ORTHO05D000058 9.6e-13 78.2 92 47.8
PSO461G0028 Papaver somniferum HOM05D001338 ORTHO05D001239 9.6e-13 78.2 125 36.0
Oeu034372.1 Olea europaea HOM05D001338 ORTHO05D001239 2.1e-12 77.0 94 39.4
Oeu012998.1 Olea europaea HOM05D001338 ORTHO05D001239 2.8e-12 76.6 94 40.4
Oeu012177.1 Olea europaea HOM05D001338 ORTHO05D001239 4.8e-12 75.9 91 42.9
FvH4_7g07902 Fragaria vesca HOM05D001338 ORTHO05D001239 8.1e-12 75.1 77 45.5
Oeu037760.1 Olea europaea HOM05D001338 ORTHO05D001239 1.1e-11 74.7 160 31.9
CSS0011720 Camellia sinensis var. sinensis HOM05D001338 ORTHO05D001239 1.4e-11 74.3 71 52.1
CSS0039736 Camellia sinensis var. sinensis HOM05D001338 ORTHO05D001239 1.4e-11 74.3 71 52.1
AT1G35150 Arabidopsis thaliana HOM05D001338 ORTHO05D001239 1.2e-10 71.2 195 29.7
AT2G06500 Arabidopsis thaliana HOM05D001338 ORTHO05D001239 1.5e-10 70.9 66 54.5
CSS0007608 Camellia sinensis var. sinensis HOM05D001338 ORTHO05D001239 1.5e-10 70.9 71 50.7
Sp1g32380 Schrenkiella parvula HOM05D001338 ORTHO05D001239 3.4e-10 69.7 148 31.8
Oeu025447.1 Olea europaea HOM05D001338 ORTHO05D001239 5.8e-10 68.9 141 36.2
Oeu023799.1 Olea europaea HOM05D001338 ORTHO05D001239 9.9e-10 68.2 94 40.4
CiPaw.02G115100 Carya illinoinensis HOM05D001338 ORTHO05D001239 1.3e-09 67.8 73 47.9
Oeu052066.1 Olea europaea HOM05D001338 ORTHO05D001239 6.4e-09 65.5 71 49.3
PSO386G0185 Papaver somniferum HOM05D001338 ORTHO05D001239 8.4e-09 65.1 67 50.7
CANSAT80G1592 Cannabis sativa HOM05D001338 ORTHO05D001239 1.9e-08 63.9 82 43.9
Oeu020403.1 Olea europaea HOM05D001338 ORTHO05D001239 5.4e-08 62.4 70 40.0
PSO063G5018 Papaver somniferum HOM05D001338 ORTHO05D001239 7.1e-08 62.0 57 50.9
PSO724G1135 Papaver somniferum HOM05D001338 ORTHO05D001239 7.1e-08 62.0 57 52.6
SpUn0007_0210 Schrenkiella parvula HOM05D001338 ORTHO05D001239 7.1e-08 62.0 159 32.1
PSO339G3643 Papaver somniferum HOM05D001338 ORTHO05D001239 4.6e-07 59.3 57 49.1
AUR62018245 Chenopodium quinoa HOM05D002760 ORTHO05D003169 2.3e-06 57.0 80 43.8
Zm00001eb395820 Zea mays HOM05D001338 ORTHO05D001239 2.3e-06 57.0 75 53.3
FAN01G2426 Fragaria x ananassa HOM05D001338 ORTHO05D001239 8.7e-06 55.1 83 39.8


User provided reference genes

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