Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb027130 Zea mays HOM05D004963 ORTHO05D006638 4.3e-116 421.4 219 100.0
Zm00001eb096130 Zea mays HOM05D004963 ORTHO05D006638 1.6e-51 206.8 219 58.9
Zm00001eb119700 Zea mays HOM05D004963 ORTHO05D006638 1.3e-43 180.6 132 75.8
Aqoxy5G03770 Aquilegia oxysepala HOM05D004963 ORTHO05D006638 4.0e-21 105.9 209 34.0
Zm00001eb387740 Zea mays HOM05D004963 ORTHO05D006638 1.2e-20 104.4 58 89.7
Zm00001eb150600 Zea mays HOM05D004963 ORTHO05D006638 2.6e-20 103.2 58 89.7
PSO063G6295 Papaver somniferum HOM05D004963 ORTHO05D006638 1.3e-19 100.9 212 33.0
PSO067G0032 Papaver somniferum HOM05D004963 ORTHO05D006638 2.8e-19 99.8 227 32.6
Nn4g22627 Nelumbo nucifera HOM05D004963 ORTHO05D006638 3.1e-18 96.3 212 33.5
GSVIVG01032403001 Vitis vinifera HOM05D004963 ORTHO05D006638 3.1e-18 96.3 206 31.6
CARHR261510 Cardamine hirsuta HOM05D004963 ORTHO05D006638 9.1e-18 94.7 208 29.8
Sp7g01430 Schrenkiella parvula HOM05D004963 ORTHO05D006638 2.7e-17 93.2 206 29.6
A07p20280 Brassica napus HOM05D004963 ORTHO05D006638 3.5e-17 92.8 208 29.3
BraA07t29729Z Brassica rapa HOM05D004963 ORTHO05D006638 3.5e-17 92.8 208 29.3
AT5G40480 Arabidopsis thaliana HOM05D004963 ORTHO05D006638 7.7e-17 91.7 208 29.3
Thhalv10027618m.g Eutrema salsugineum HOM05D004963 ORTHO05D006638 1.0e-16 91.3 208 28.8
Migut.H00075 Erythranthe guttata HOM05D004963 ORTHO05D006638 1.3e-16 90.9 204 30.9
Carub.0007s3510 Capsella rubella HOM05D004963 ORTHO05D006638 1.7e-16 90.5 206 29.1
AL7G49340 Arabidopsis lyrata HOM05D004963 ORTHO05D006638 2.2e-16 90.1 213 29.6
BcaC08g44458 Brassica carinata HOM05D004963 ORTHO05D006638 2.9e-16 89.7 208 28.8
Psat1g054400 Pisum sativum HOM05D004963 ORTHO05D006638 2.9e-16 89.7 204 31.4
THA.LOC104805370 Tarenaya hassleriana HOM05D004963 ORTHO05D006638 2.9e-16 89.7 206 31.6
C06p19070 Brassica napus HOM05D004963 ORTHO05D006638 3.8e-16 89.4 208 28.8
BolC6t37108H Brassica oleracea HOM05D004963 ORTHO05D006638 3.8e-16 89.4 208 28.8
CDE07G0232 Ceratophyllum demersum HOM05D004963 ORTHO05D006638 3.8e-16 89.4 208 30.3
BcaB02g07947 Brassica carinata HOM05D004963 ORTHO05D006638 5.0e-16 89.0 208 29.3
Lalb_Chr06g0175731 Lupinus albus HOM05D004963 ORTHO05D006638 5.0e-16 89.0 204 30.9
PGR083G0595 Punica granatum HOM05D004963 ORTHO05D006638 6.5e-16 88.6 216 28.2
Glyma.05G003500 Glycine max HOM05D004963 ORTHO05D006638 8.5e-16 88.2 211 30.8
Ca_04160_v3 Cicer arietinum L. HOM05D004963 ORTHO05D006638 1.1e-15 87.8 204 31.4
ATR0824G203 Amborella trichopoda HOM05D004963 ORTHO05D006638 1.9e-15 87.0 239 30.5
Dinv35107 Davidia involucrata HOM05D004963 ORTHO05D006638 1.9e-15 87.0 204 30.4
RcHm_v2.0_Chr2g0173101 Rosa chinensis HOM05D004963 ORTHO05D006638 1.9e-15 87.0 223 29.1
TAR629G0020 Trochodendron aralioides HOM05D004963 ORTHO05D006638 1.9e-15 87.0 212 30.7
Aa31LG9G1130 Aethionema arabicum HOM05D004963 ORTHO05D006638 3.2e-15 86.3 203 28.1
Ciclev10018026m.g Citrus clementina HOM05D004963 ORTHO05D006638 4.2e-15 85.9 220 27.3
Atru.chr6.2399 Acer truncatum HOM05D004963 ORTHO05D006638 5.5e-15 85.5 220 28.6
Eucgr.J02245 Eucalyptus grandis HOM05D004963 ORTHO05D006638 7.2e-15 85.1 223 30.0
CSS0016229 Camellia sinensis var. sinensis HOM05D004963 ORTHO05D006638 9.5e-15 84.7 208 27.9
Cc07_g01650 Coffea canephora HOM05D004963 ORTHO05D006638 9.5e-15 84.7 205 30.7
SalBow1G1005 Salvia bowleyana HOM05D004963 ORTHO05D006638 9.5e-15 84.7 203 30.0
FvH4_6g51430 Fragaria vesca HOM05D004963 ORTHO05D006638 1.2e-14 84.3 218 28.0
arahy.Tifrunner.gnm1.ann1.8578L4 Arachis hypogaea HOM05D004963 ORTHO05D006638 1.6e-14 84.0 206 30.6
FAN14G4225 Fragaria x ananassa HOM05D004963 ORTHO05D006638 2.1e-14 83.6 218 28.0
Lj2g0007459 Lotus japonicus HOM05D004963 ORTHO05D006638 2.8e-14 83.2 203 29.6
Sc03g0007420 Simmondsia chinensis HOM05D004963 ORTHO05D006638 3.6e-14 82.8 203 27.6
TWI56G0249 Tripterygium wilfordii HOM05D004963 ORTHO05D006638 6.1e-14 82.0 205 29.3
CiPaw.03G043900 Carya illinoinensis HOM05D004963 ORTHO05D006638 8.0e-14 81.6 237 27.4
Oeu046826.1 Olea europaea HOM05D004963 ORTHO05D006638 8.0e-14 81.6 210 28.1
TPR.G33247 Trifolium pratense HOM05D004963 ORTHO05D006638 1.0e-13 81.3 207 30.9
Nitab4.5_0001655g0190 Nicotiana tabacum HOM05D004963 ORTHO05D006638 2.3e-13 80.1 204 28.4
SGA_v2.0_scaffold18G08276 Striga asiatica HOM05D004963 ORTHO05D006638 3.0e-13 79.7 202 27.7
Ah.03g137060 Amaranthus hybridus HOM05D004963 ORTHO05D006638 5.2e-13 79.0 212 27.8
Thecc.04G017500 Theobroma cacao HOM05D004963 ORTHO05D006638 5.2e-13 79.0 208 28.4
CAN.G257.2 Capsicum annuum HOM05D004963 ORTHO05D006638 6.8e-13 78.6 204 26.5
Potri.001G345100 Populus trichocarpa HOM05D004963 ORTHO05D006638 6.8e-13 78.6 237 27.0
VMungo0464G1605 Vigna mungo HOM05D004963 ORTHO05D006638 6.8e-13 78.6 204 28.9
Rhsim10G0016800 Rhododendron simsii HOM05D004963 ORTHO05D006638 8.8e-13 78.2 205 26.8
Sabra16G0224100 Salix brachista HOM05D004963 ORTHO05D006638 8.8e-13 78.2 205 28.3
vmacro05867 Vaccinium macrocarpon HOM05D004963 ORTHO05D006638 8.8e-13 78.2 209 27.8
Gohir.A09G029300 Gossypium hirsutum HOM05D004963 ORTHO05D006638 1.2e-12 77.8 222 25.7
PGSC0003DMG400008314 Solanum tuberosum HOM05D004963 ORTHO05D006638 2.0e-12 77.0 204 27.0
Gohir.D09G029000 Gossypium hirsutum HOM05D004963 ORTHO05D006638 2.6e-12 76.6 222 26.6
Medtr6g004840 Medicago truncatula HOM05D004963 ORTHO05D006638 2.6e-12 76.6 204 29.4
DCAR_001439 Daucus carota HOM05D004963 ORTHO05D006638 3.4e-12 76.3 194 28.4
Cfa007367 Carpinus fangiana HOM05D004963 ORTHO05D006638 4.4e-12 75.9 109 35.8
Nitab4.5_0001040g0180 Nicotiana tabacum HOM05D004963 ORTHO05D006638 5.7e-12 75.5 204 27.5
Phvul.004G006800 Phaseolus vulgaris HOM05D004963 ORTHO05D006638 5.7e-12 75.5 204 28.4
Prupe.3G292000 Prunus persica HOM05D004963 ORTHO05D006638 5.7e-12 75.5 223 25.6
MSTRG.3144 Avicennia marina HOM05D004963 ORTHO05D006638 7.5e-12 75.1 204 27.5
EL10Ac6g14083 Beta vulgaris HOM05D004963 ORTHO05D006638 9.8e-12 74.7 208 26.4
Manes.17G112100 Manihot esculenta HOM05D004963 ORTHO05D006638 9.8e-12 74.7 204 28.4
Peaxi162Scf00796g00213 Petunia axillaris HOM05D004963 ORTHO05D006638 9.8e-12 74.7 204 26.0
Rhsim10G0015700 Rhododendron simsii HOM05D004963 ORTHO05D006638 1.3e-11 74.3 205 25.9
Solyc02g070810.4 Solanum lycopersicum HOM05D004963 ORTHO05D006638 1.3e-11 74.3 204 26.5
Sopen02g019920 Solanum pennellii HOM05D004963 ORTHO05D006638 1.3e-11 74.3 204 26.5
unitig_748.g6983 Utricularia gibba HOM05D004963 ORTHO05D006638 1.3e-11 74.3 217 28.1
MELO3C026582.2 Cucumis melo HOM05D004963 ORTHO05D006638 1.7e-11 73.9 207 27.5
SEGI_19244 Sequoiadendron giganteum HOM05D004963 ORTHO05D006638 1.7e-11 73.9 225 26.2
CsaV3_3G042810 Cucumis sativus L. HOM05D004963 ORTHO05D006638 2.2e-11 73.6 207 27.1
Migut.J01521 Erythranthe guttata HOM05D004963 ORTHO05D006638 2.2e-11 73.6 200 26.5
Haze_14742 Corylus avellana HOM05D004963 ORTHO05D006638 2.8e-11 73.2 130 33.8
Sed0022939 Sechium edule HOM05D004963 ORTHO05D006638 4.9e-11 72.4 207 27.5
Migut.J01523 Erythranthe guttata HOM05D004963 ORTHO05D006638 1.2e-09 67.8 200 25.5
MD17G1026700 Malus domestica HOM05D004963 ORTHO05D006638 1.2e-09 67.8 112 33.0
AUR62028465 Chenopodium quinoa HOM05D004963 ORTHO05D006638 7.8e-09 65.1 210 24.3
AUR62043498 Chenopodium quinoa HOM05D004963 ORTHO05D006638 7.8e-09 65.1 213 24.9
VMungo1383G2035 Vigna mungo HOM05D004963 ORTHO05D006638 6.6e-08 62.0 79 40.5
Mapoly0043s0050 Marchantia polymorpha HOM05D004963 ORTHO05D006638 1.1e-07 61.2 90 32.2


User provided reference genes

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