Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb025710 Zea mays HOM05D002139 ORTHO05D445269 2.6e-172 608.6 300 100.0
Zm00001eb117430 Zea mays HOM05D002139 ORTHO05D002264 1.6e-12 77.8 47 78.7
Zm00001eb300320 Zea mays HOM05D002139 ORTHO05D002264 2.3e-11 73.9 47 74.5
Os07g0159800 Oryza sativa ssp. japonica HOM05D002139 ORTHO05D002264 2.4e-08 63.9 47 61.7
AUR62036347 Chenopodium quinoa HOM05D002139 ORTHO05D002264 6.9e-08 62.4 99 42.4
vmacro20568 Vaccinium macrocarpon HOM05D002139 ORTHO05D002264 2.0e-07 60.8 48 58.3
Os03g0788200 Oryza sativa ssp. japonica HOM05D002139 ORTHO05D002264 3.4e-07 60.1 47 57.4
CAN.G674.12 Capsicum annuum HOM05D002139 ORTHO05D002264 1.7e-06 57.8 48 56.2
AUR62030707 Chenopodium quinoa HOM05D002139 ORTHO05D002264 2.2e-06 57.4 100 38.0
Nitab4.5_0000473g0030 Nicotiana tabacum HOM05D002139 ORTHO05D002264 2.2e-06 57.4 48 54.2
Rhsim01G0068700 Rhododendron simsii HOM05D002139 ORTHO05D002264 3.8e-06 56.6 49 53.1
Actinidia06185 Actinidia chinensis HOM05D002139 ORTHO05D002264 4.9e-06 56.2 49 53.1
QL07p027306 Quercus lobata HOM05D002139 ORTHO05D002264 4.9e-06 56.2 49 51.0
CAN.G911.36 Capsicum annuum HOM05D002139 ORTHO05D002264 6.4e-06 55.8 48 52.1
Nitab4.5_0000721g0250 Nicotiana tabacum HOM05D002139 ORTHO05D002264 8.4e-06 55.5 48 54.2
Nitab4.5_0005257g0010 Nicotiana tabacum HOM05D002139 ORTHO05D002264 8.4e-06 55.5 48 54.2
Sopen10g032330 Solanum pennellii HOM05D002139 ORTHO05D002264 8.4e-06 55.5 48 54.2


User provided reference genes

Program Settings