Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb016890 Zea mays HOM05D003336 ORTHO05D003807 3.3e-92 341.7 169 100.0
Zm00001eb121330 Zea mays HOM05D003336 ORTHO05D003807 3.3e-92 341.7 169 100.0
Zm00001eb059340 Zea mays HOM05D003336 ORTHO05D003807 9.6e-92 340.1 169 99.4
Zm00001eb398700 Zea mays HOM05D003336 ORTHO05D003807 9.6e-92 340.1 169 99.4
Zm00001eb324020 Zea mays HOM05D003336 ORTHO05D003807 2.8e-91 338.6 169 99.4
Zm00001eb336440 Zea mays HOM05D003336 ORTHO05D003807 2.8e-91 338.6 169 98.8
Zm00001eb007550 Zea mays HOM05D003336 ORTHO05D003807 4.8e-91 337.8 169 98.8
Zm00001eb376450 Zea mays HOM05D003336 ORTHO05D003807 4.8e-91 337.8 169 98.2
Zm00001eb283430 Zea mays HOM05D003336 ORTHO05D003807 8.2e-91 337.0 169 98.8
Os05g0194600 Oryza sativa ssp. japonica HOM05D003336 ORTHO05D003807 2.8e-83 312.0 167 91.0
EL10Ac3g06008 Beta vulgaris HOM05D003336 ORTHO05D003807 2.5e-71 272.3 149 87.2
GSVIVG01006062001 Vitis vinifera HOM05D003336 ORTHO05D003807 2.1e-70 269.2 146 88.4
Zm00001eb442100 Zea mays HOM05D003336 ORTHO05D003807 3.6e-70 268.5 169 83.4
Gohir.A02G012500 Gossypium hirsutum HOM05D003336 ORTHO05D003807 4.7e-70 268.1 138 92.8
Gorai.005G016800 Gossypium raimondii HOM05D003336 ORTHO05D003807 4.7e-70 268.1 138 92.8
QL07p004835 Quercus lobata HOM05D003336 ORTHO05D003807 4.7e-70 268.1 140 90.0
ATR0796G111 Amborella trichopoda HOM05D003336 ORTHO05D003807 6.1e-70 267.7 143 87.4
Eucgr.A00092 Eucalyptus grandis HOM05D003336 ORTHO05D003807 6.1e-70 267.7 138 92.0
Sc25g0002520 Simmondsia chinensis HOM05D003336 ORTHO05D003807 6.1e-70 267.7 139 91.4
AUR62011428 Chenopodium quinoa HOM05D003336 ORTHO05D003807 7.9e-70 267.3 147 87.8
Eucgr.H01866 Eucalyptus grandis HOM05D003336 ORTHO05D003807 7.9e-70 267.3 138 91.3
Eucgr.L00050 Eucalyptus grandis HOM05D003336 ORTHO05D003807 7.9e-70 267.3 138 92.0
AUR62008210 Chenopodium quinoa HOM05D003336 ORTHO05D003807 1.0e-69 266.9 147 86.4
Manes.04G043500 Manihot esculenta HOM05D003336 ORTHO05D003807 1.0e-69 266.9 143 89.5
Gohir.D02G013300 Gossypium hirsutum HOM05D003336 ORTHO05D003807 1.8e-69 266.2 138 92.0
Eucgr.A00283 Eucalyptus grandis HOM05D003336 ORTHO05D003807 2.3e-69 265.8 138 91.3
AUR62030962 Chenopodium quinoa HOM05D003336 ORTHO05D003807 3.0e-69 265.4 147 87.1
Aqoxy2G03656 Aquilegia oxysepala HOM05D003336 ORTHO05D003807 3.9e-69 265.0 150 84.7
Hma1.2p1_0886F.1_g232710 Hydrangea macrophylla HOM05D003336 ORTHO05D003807 5.1e-69 264.6 140 88.6
CiPaw.02G054300 Carya illinoinensis HOM05D003336 ORTHO05D003807 6.7e-69 264.2 138 89.9
Ciclev10001634m.g Citrus clementina HOM05D003336 ORTHO05D003807 6.7e-69 264.2 144 86.8
Duzib151G0181 Durio zibethinus HOM05D003336 ORTHO05D003807 6.7e-69 264.2 138 91.3
CANSAT78G0594 Cannabis sativa HOM05D003336 ORTHO05D003807 8.8e-69 263.8 149 87.2
QL10p049056 Quercus lobata HOM05D003336 ORTHO05D003807 8.8e-69 263.8 140 88.6
TAR365G0105 Trochodendron aralioides HOM05D003336 ORTHO05D003807 8.8e-69 263.8 151 84.1
HPP92_018106 Vanilla planifolia HOM05D003336 ORTHO05D003807 1.1e-68 263.5 137 92.0
Ah.11g051610 Amaranthus hybridus HOM05D003336 ORTHO05D003807 1.5e-68 263.1 162 81.5
Thecc.04G177600 Theobroma cacao HOM05D003336 ORTHO05D003807 1.5e-68 263.1 137 91.2
PGR083G1911 Punica granatum HOM05D003336 ORTHO05D003807 2.6e-68 262.3 138 90.6
Sed0018746 Sechium edule HOM05D003336 ORTHO05D003807 2.6e-68 262.3 138 90.6
Rhsim09G0026500 Rhododendron simsii HOM05D003336 ORTHO05D003807 3.3e-68 261.9 138 91.3
RhsimUnG0196100 Rhododendron simsii HOM05D003336 ORTHO05D003807 3.3e-68 261.9 138 91.3
Glyma.17G108000 Glycine max HOM05D003336 ORTHO05D003807 4.4e-68 261.5 150 84.0
MELO3C021601.2 Cucumis melo HOM05D003336 ORTHO05D003807 5.7e-68 261.2 139 89.2
TWI34G1872 Tripterygium wilfordii HOM05D003336 ORTHO05D003807 5.7e-68 261.2 138 88.4
arahy.Tifrunner.gnm1.ann1.4MR6LE Arachis hypogaea HOM05D003336 ORTHO05D003807 7.4e-68 260.8 155 82.6
arahy.Tifrunner.gnm1.ann1.HN7X2L Arachis hypogaea HOM05D003336 ORTHO05D003807 7.4e-68 260.8 155 82.6
Atru.chr6.1778 Acer truncatum HOM05D003336 ORTHO05D003807 9.7e-68 260.4 138 87.0
PSO210G2800 Papaver somniferum HOM05D003336 ORTHO05D003807 9.7e-68 260.4 137 89.1
MELO3C013276.2 Cucumis melo HOM05D003336 ORTHO05D003807 1.3e-67 260.0 139 88.5
Migut.O00911 Erythranthe guttata HOM05D003336 ORTHO05D003807 1.3e-67 260.0 143 86.0
Phvul.006G109300 Phaseolus vulgaris HOM05D003336 ORTHO05D003807 1.3e-67 260.0 143 86.7
CsaV3_5G026930 Cucumis sativus L. HOM05D003336 ORTHO05D003807 1.7e-67 259.6 139 89.2
Migut.N03104 Erythranthe guttata HOM05D003336 ORTHO05D003807 1.7e-67 259.6 143 85.3
Glyma.19G252200 Glycine max HOM05D003336 ORTHO05D003807 1.7e-67 259.6 143 86.7
Potri.017G029200 Populus trichocarpa HOM05D003336 ORTHO05D003807 2.8e-67 258.8 138 88.4
THA.LOC104806347 Tarenaya hassleriana HOM05D003336 ORTHO05D003807 2.8e-67 258.8 138 89.1
ClCG10G008650 Citrullus lanatus HOM05D003336 ORTHO05D003807 3.7e-67 258.5 137 89.8
SGA_v2.0_scaffold1G00608 Striga asiatica HOM05D003336 ORTHO05D003807 3.7e-67 258.5 138 89.1
MSTRG.9761 Avicennia marina HOM05D003336 ORTHO05D003807 4.8e-67 258.1 148 83.8
Lj1g0015608 Lotus japonicus HOM05D003336 ORTHO05D003807 4.8e-67 258.1 139 88.5
FvH4_3g16550 Fragaria vesca HOM05D003336 ORTHO05D003807 6.3e-67 257.7 138 88.4
FAN11G0541 Fragaria x ananassa HOM05D003336 ORTHO05D003807 6.3e-67 257.7 138 88.4
FAN16G2332 Fragaria x ananassa HOM05D003336 ORTHO05D003807 6.3e-67 257.7 138 88.4
FAN25G0065 Fragaria x ananassa HOM05D003336 ORTHO05D003807 6.3e-67 257.7 138 88.4
RcHm_v2.0_Chr1g0331181 Rosa chinensis HOM05D003336 ORTHO05D003807 6.3e-67 257.7 138 88.4
VMungo0540G1651 Vigna mungo HOM05D003336 ORTHO05D003807 6.3e-67 257.7 143 85.3
CSS0038565 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 8.2e-67 257.3 137 89.8
CSS0043784 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 8.2e-67 257.3 137 89.8
arahy.Tifrunner.gnm1.ann1.H7WPER Arachis hypogaea HOM05D003336 ORTHO05D003807 2.4e-66 255.8 150 81.3
TPR.G37811 Trifolium pratense HOM05D003336 ORTHO05D003807 2.4e-66 255.8 150 82.7
Atru.chr6.1080 Acer truncatum HOM05D003336 ORTHO05D003807 3.1e-66 255.4 138 86.2
AT4G22720 Arabidopsis thaliana HOM05D003336 ORTHO05D003807 3.1e-66 255.4 144 83.3
FAN03G2504 Fragaria x ananassa HOM05D003336 ORTHO05D003807 3.1e-66 255.4 138 87.0
Lsat_1_v5_gn_3_6100 Lactuca sativa HOM05D003336 ORTHO05D003807 3.1e-66 255.4 145 82.8
Aa31LG6G4680 Aethionema arabicum HOM05D003336 ORTHO05D003807 4.1e-66 255.0 138 87.0
AL7G30880 Arabidopsis lyrata HOM05D003336 ORTHO05D003807 4.1e-66 255.0 144 83.3
Lalb_Chr18g0044261 Lupinus albus HOM05D003336 ORTHO05D003807 4.1e-66 255.0 136 89.0
ECA246G0584 Erigeron canadensis HOM05D003336 ORTHO05D003807 5.3e-66 254.6 137 87.6
FAN10G0305 Fragaria x ananassa HOM05D003336 ORTHO05D003807 5.3e-66 254.6 160 78.1
FAN10G0412 Fragaria x ananassa HOM05D003336 ORTHO05D003807 5.3e-66 254.6 160 78.1
CARHR229640 Cardamine hirsuta HOM05D003336 ORTHO05D003807 7.0e-66 254.2 144 83.3
A01p13940 Brassica napus HOM05D003336 ORTHO05D003807 9.1e-66 253.8 138 87.0
BraA01t01340Z Brassica rapa HOM05D003336 ORTHO05D003807 9.1e-66 253.8 138 87.0
Thhalv10025586m.g Eutrema salsugineum HOM05D003336 ORTHO05D003807 9.1e-66 253.8 144 82.6
Psat6g173800 Pisum sativum HOM05D003336 ORTHO05D003807 9.1e-66 253.8 144 84.7
CSS0016383 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 1.2e-65 253.4 137 89.1
Carub.0007s1861 Capsella rubella HOM05D003336 ORTHO05D003807 2.0e-65 252.7 144 82.6
Medtr1g090817 Medicago truncatula HOM05D003336 ORTHO05D003807 2.6e-65 252.3 144 84.0
Solyc02g068750.1 Solanum lycopersicum HOM05D003336 ORTHO05D003807 2.6e-65 252.3 141 84.4
Cc04_g08950 Coffea canephora HOM05D003336 ORTHO05D003807 3.5e-65 251.9 144 84.0
PGSC0003DMG400010450 Solanum tuberosum HOM05D003336 ORTHO05D003807 3.5e-65 251.9 141 85.1
BcaNung01042 Brassica carinata HOM05D003336 ORTHO05D003807 4.5e-65 251.5 138 85.5
HanXRQChr17g0533451 Helianthus annuus HOM05D003336 ORTHO05D003807 4.5e-65 251.5 160 75.6
Prupe.1G196300 Prunus persica HOM05D003336 ORTHO05D003807 4.5e-65 251.5 138 87.0
FAN21G2317 Fragaria x ananassa HOM05D003336 ORTHO05D003807 5.9e-65 251.1 138 86.2
Sopen02g017920 Solanum pennellii HOM05D003336 ORTHO05D003807 7.7e-65 250.8 141 84.4
BcaC09g51096 Brassica carinata HOM05D003336 ORTHO05D003807 1.0e-64 250.4 138 85.5
C01p16980 Brassica napus HOM05D003336 ORTHO05D003807 1.0e-64 250.4 138 85.5
MD17G1219400 Malus domestica HOM05D003336 ORTHO05D003807 6.5e-64 247.7 138 86.2
BolC1t01638H Brassica oleracea HOM05D003336 ORTHO05D003807 8.5e-64 247.3 138 84.8
CAN.G149.29 Capsicum annuum HOM05D003336 ORTHO05D003807 1.1e-63 246.9 138 84.8
FAN06G1925 Fragaria x ananassa HOM05D003336 ORTHO05D003807 1.1e-63 246.9 136 86.8
Oeu061601.1 Olea europaea HOM05D003336 ORTHO05D003807 5.5e-63 244.6 135 87.4
arahy.Tifrunner.gnm1.ann1.UX0YUZ Arachis hypogaea HOM05D003336 ORTHO05D003807 3.6e-62 241.9 135 85.2
AUR62003310 Chenopodium quinoa HOM05D003336 ORTHO05D003807 1.8e-61 239.6 128 88.3
SHI23517 Sapria himalayana HOM05D003336 ORTHO05D003807 1.5e-60 236.5 165 72.7
Atru.chr6.1044 Acer truncatum HOM05D003336 ORTHO05D003807 3.7e-59 231.9 138 80.4
Mapoly0054s0003 Marchantia polymorpha HOM05D003336 ORTHO05D003807 3.1e-58 228.8 138 78.3
SMO196G0197 Selaginella moellendorffii HOM05D003336 ORTHO05D003807 5.3e-58 228.0 137 79.6
Pp3c8_19600 Physcomitrium patens HOM05D003336 ORTHO05D003807 1.7e-56 223.0 136 77.2
Zm00001eb191860 Zea mays HOM05D003336 ORTHO05D003807 1.8e-53 213.0 106 98.1
RcHm_v2.0_Chr1g0329821 Rosa chinensis HOM05D003336 ORTHO05D003807 3.0e-53 212.2 138 76.1
CBR_g36984 Chara braunii HOM05D003336 ORTHO05D003807 5.2e-53 211.5 138 72.5
C01p17110 Brassica napus HOM05D003336 ORTHO05D003807 7.0e-50 201.1 130 78.5
PRCOL_00003655 Prasinoderma coloniale HOM05D003336 ORTHO05D003807 9.1e-50 200.7 136 72.1
CSS0012442 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 5.9e-49 198.0 138 71.0
SEGI_39923 Sequoiadendron giganteum HOM05D003336 ORTHO05D003807 1.1e-47 193.7 104 86.5
MCO05G700 Micromonas commoda HOM05D003336 ORTHO05D003807 2.5e-47 192.6 136 66.2
SpUn1040_0020 Schrenkiella parvula HOM05D003336 ORTHO05D003807 1.6e-46 189.9 104 83.7
arahy.Tifrunner.gnm1.ann1.DI9DGG Arachis hypogaea HOM05D003336 ORTHO05D003807 8.0e-46 187.6 116 78.4
C01p17150 Brassica napus HOM05D003336 ORTHO05D003807 1.0e-45 187.2 105 83.8
BolC1t01652H Brassica oleracea HOM05D003336 ORTHO05D003807 1.0e-45 187.2 105 83.8
BcaC09g51089 Brassica carinata HOM05D003336 ORTHO05D003807 1.4e-45 186.8 105 83.8
Aqoxy7G02152 Aquilegia oxysepala HOM05D003336 ORTHO05D003807 4.4e-44 181.8 116 76.7
C01p17060 Brassica napus HOM05D003336 ORTHO05D003807 2.7e-41 172.6 105 79.0
C01p17090 Brassica napus HOM05D003336 ORTHO05D003807 2.7e-41 172.6 105 79.0
BolC1t01648H Brassica oleracea HOM05D003336 ORTHO05D003807 2.7e-41 172.6 105 79.0
CSS0001398 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 2.5e-39 166.0 98 81.6
Ciclev10002827m.g Citrus clementina HOM05D003336 ORTHO05D003807 4.7e-38 161.8 92 83.7
C01p17130 Brassica napus HOM05D003336 ORTHO05D003807 6.1e-38 161.4 105 76.2
BolC1t01651H Brassica oleracea HOM05D003336 ORTHO05D003807 6.1e-38 161.4 105 76.2
CSS0025461 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 1.1e-34 150.6 137 59.1
Cfa023393 Carpinus fangiana HOM05D003336 ORTHO05D003807 9.2e-34 147.5 165 50.9
FAN15G0900 Fragaria x ananassa HOM05D003336 ORTHO05D003807 5.9e-33 144.8 81 85.2
Cpa.g.sc9.295 Carica papaya HOM05D003336 ORTHO05D003807 7.8e-33 144.4 79 88.6
BolC1t01646H Brassica oleracea HOM05D003336 ORTHO05D003807 3.3e-31 139.0 88 77.3
CSS0006022 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 8.0e-30 134.4 127 59.1
CSS0000567 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 6.8e-29 131.3 91 72.5
CSS0042404 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 1.2e-28 130.6 65 93.8
CSS0043766 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 1.2e-28 130.6 65 93.8
FAN13G1004 Fragaria x ananassa HOM05D003336 ORTHO05D003807 1.2e-25 120.6 66 86.4
CSS0040953 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 3.2e-18 95.9 127 48.0
A08p15940 Brassica napus HOM05D003336 ORTHO05D003807 1.2e-17 94.0 53 84.9
CSS0023275 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 1.6e-17 93.6 56 78.6
CSS0001716 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 8.6e-16 87.8 70 65.7
CSS0040178 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 8.6e-16 87.8 70 65.7
CSS0049342 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 7.5e-12 74.7 66 60.6
MBI01_g10302_MAGBIO Magnolia biondii HOM05D003336 ORTHO05D003807 7.5e-12 74.7 62 59.7
Atru.chr7.305 Acer truncatum HOM05D003336 ORTHO05D003807 2.2e-11 73.2 66 53.0
Atru.chr7.309 Acer truncatum HOM05D003336 ORTHO05D003807 4.1e-10 68.9 62 53.2
Nn1g09612 Nelumbo nucifera HOM05D003336 ORTHO05D003807 1.6e-09 67.0 35 88.6
CSS0007615 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 3.5e-09 65.9 35 85.7
C03p84370 Brassica napus HOM05D000924 ORTHO05D001209 1.0e-08 64.3 41 65.9
DCAR_026317 Daucus carota HOM05D003336 ORTHO05D003807 1.0e-08 64.3 35 85.7
A08p15930 Brassica napus HOM05D000924 ORTHO05D001209 5.1e-08 62.0 49 63.3
SEGI_08325 Sequoiadendron giganteum HOM05D003336 ORTHO05D003807 1.9e-07 60.1 35 77.1
Psat6g173760 Pisum sativum HOM05D003336 ORTHO05D003807 2.8e-06 56.2 52 57.7
FAN17G2067 Fragaria x ananassa HOM05D003336 ORTHO05D003807 4.7e-06 55.5 31 80.6
Atru.chr7.310 Acer truncatum HOM05D000001 ORTHO05D009429 8.1e-06 54.7 32 78.1


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