Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb016350 Zea mays HOM05D007614 ORTHO05D009538 0.0e+00 2506.1 1351 100.0
MBI19_g34788_MAGBIO Magnolia biondii HOM05D007614 ORTHO05D009538 2.4e-262 909.8 1349 43.7
TAR365G0799 Trochodendron aralioides HOM05D007614 ORTHO05D009538 1.1e-259 901.0 1349 42.4
Aqoxy2G02920 Aquilegia oxysepala HOM05D007614 ORTHO05D009538 7.4e-251 871.7 1289 42.3
Dinv29737 Davidia involucrata HOM05D007614 ORTHO05D009538 1.4e-246 857.4 1318 40.6
Nn3g21526 Nelumbo nucifera HOM05D007614 ORTHO05D009538 6.7e-244 848.6 1350 41.4
GSVIVG01035126001 Vitis vinifera HOM05D007614 ORTHO05D009538 3.4e-240 836.3 1193 42.2
CSS0029892 Camellia sinensis var. sinensis HOM05D007614 ORTHO05D009538 1.4e-238 830.9 1370 39.9
Atru.chr6.1993 Acer truncatum HOM05D007614 ORTHO05D009538 1.3e-236 824.3 1233 42.2
MD13G1166500 Malus domestica HOM05D007614 ORTHO05D009538 5.1e-236 822.4 1345 39.2
FvH4_4g18510 Fragaria vesca HOM05D007614 ORTHO05D009538 6.3e-234 815.5 1179 42.2
RcHm_v2.0_Chr4g0423071 Rosa chinensis HOM05D007614 ORTHO05D009538 8.2e-234 815.1 1262 41.3
PSO407G0339 Papaver somniferum HOM05D007614 ORTHO05D009538 6.9e-233 812.0 1295 39.9
Cfa015415 Carpinus fangiana HOM05D007614 ORTHO05D009538 1.2e-232 811.2 1190 41.6
QL06p010082 Quercus lobata HOM05D007614 ORTHO05D009538 1.7e-231 807.4 1339 39.7
CSS0000522 Camellia sinensis var. sinensis HOM05D007614 ORTHO05D009538 2.2e-231 807.0 1367 39.6
HPP92_013726 Vanilla planifolia HOM05D007614 ORTHO05D009538 2.2e-231 807.0 1351 39.4
Lj3C822G9 Lonicera japonica HOM05D007614 ORTHO05D009538 2.9e-231 806.6 1272 39.9
TWI73G0642 Tripterygium wilfordii HOM05D007614 ORTHO05D009538 6.5e-231 805.4 1276 40.4
FAN17G0278 Fragaria x ananassa HOM05D007614 ORTHO05D009538 8.5e-231 805.1 1181 41.7
FAN07G2176 Fragaria x ananassa HOM05D007614 ORTHO05D009538 1.3e-228 797.7 1292 40.0
FAN12G3001 Fragaria x ananassa HOM05D007614 ORTHO05D009538 2.5e-227 793.5 1351 39.0
Nitab4.5_0002628g0040 Nicotiana tabacum HOM05D007614 ORTHO05D009538 2.2e-226 790.4 1300 39.7
CiPaw.02G080700 Carya illinoinensis HOM05D007614 ORTHO05D009538 8.2e-226 788.5 1274 39.2
Ciclev10004153m.g Citrus clementina HOM05D007614 ORTHO05D009538 1.8e-225 787.3 1279 40.1
Duzib151G0258 Durio zibethinus HOM05D007614 ORTHO05D009538 2.4e-225 786.9 1341 38.6
Cc03_g01650 Coffea canephora HOM05D007614 ORTHO05D009538 6.9e-225 785.4 1245 40.4
Gorai.006G076700 Gossypium raimondii HOM05D007614 ORTHO05D009538 4.5e-224 782.7 1222 40.6
Sopen01g028150 Solanum pennellii HOM05D007614 ORTHO05D009538 5.9e-224 782.3 1225 39.9
Nitab4.5_0000513g0110 Nicotiana tabacum HOM05D007614 ORTHO05D009538 3.8e-223 779.6 1294 40.3
FAN12G0400 Fragaria x ananassa HOM05D007614 ORTHO05D009538 4.2e-222 776.2 1271 39.7
Peaxi162Scf00065g01533 Petunia axillaris HOM05D007614 ORTHO05D009538 4.2e-222 776.2 1292 39.3
Solyc01g066610.4 Solanum lycopersicum HOM05D007614 ORTHO05D009538 4.2e-222 776.2 1224 40.1
Oeu006410.1 Olea europaea HOM05D007614 ORTHO05D009538 9.7e-219 765.0 1289 38.7
Haze_01174 Corylus avellana HOM05D007614 ORTHO05D009538 4.8e-218 762.7 1258 39.4
SGA_v2.0_scaffold67G22611 Striga asiatica HOM05D007614 ORTHO05D009538 8.2e-218 761.9 1367 37.5
SalBow2G0719 Salvia bowleyana HOM05D007614 ORTHO05D009538 1.2e-216 758.1 1249 39.6
C02p57050 Brassica napus HOM05D007614 ORTHO05D009538 3.8e-215 753.1 1236 39.2
A02p37890 Brassica napus HOM05D007614 ORTHO05D009538 5.0e-215 752.7 1266 38.8
COL.COLO4_37910 Corchorus olitorius HOM05D007614 ORTHO05D009538 5.0e-215 752.7 1341 38.1
BolC2t11775H Brassica oleracea HOM05D007614 ORTHO05D009538 1.4e-214 751.1 1269 38.7
BcaB07g34217 Brassica carinata HOM05D007614 ORTHO05D009538 5.5e-214 749.2 1250 38.8
Sabra10G0007500 Salix brachista HOM05D007614 ORTHO05D009538 7.2e-214 748.8 1216 38.7
Sc13g0003320 Simmondsia chinensis HOM05D007614 ORTHO05D009538 7.2e-214 748.8 1279 37.6
DCAR_027058 Daucus carota HOM05D007614 ORTHO05D009538 9.4e-214 748.4 1158 40.6
Thhalv10003518m.g Eutrema salsugineum HOM05D007614 ORTHO05D009538 3.6e-213 746.5 1273 38.1
PGR031G0733 Punica granatum HOM05D007614 ORTHO05D009538 7.4e-211 738.8 1285 38.4
AT5G49110 Arabidopsis thaliana HOM05D007614 ORTHO05D009538 1.7e-210 737.6 1212 39.0
BraA02t08773Z Brassica rapa HOM05D007614 ORTHO05D009538 4.8e-210 736.1 1282 38.4
CANSAT78G1530 Cannabis sativa HOM05D007614 ORTHO05D009538 6.3e-210 735.7 1243 38.5
ATR0796G125 Amborella trichopoda HOM05D007614 ORTHO05D009538 1.8e-209 734.2 1337 37.9
THA.LOC104827336 Tarenaya hassleriana HOM05D007614 ORTHO05D009538 2.4e-209 733.8 1348 36.4
ECA240G3304 Erigeron canadensis HOM05D007614 ORTHO05D009538 5.3e-209 732.6 1162 39.6
CARHR182630 Cardamine hirsuta HOM05D007614 ORTHO05D009538 1.2e-208 731.5 1271 38.2
AL8G22620 Arabidopsis lyrata HOM05D007614 ORTHO05D009538 7.7e-208 728.8 1207 39.4
Prupe.1G132900 Prunus persica HOM05D007614 ORTHO05D009538 3.2e-206 723.4 1044 41.6
Lsat_1_v5_gn_6_96381 Lactuca sativa HOM05D007614 ORTHO05D009538 2.1e-205 720.7 1264 38.4
Potri.010G011800 Populus trichocarpa HOM05D007614 ORTHO05D009538 1.0e-204 718.4 1318 37.4
SEGI_15090 Sequoiadendron giganteum HOM05D007614 ORTHO05D009538 7.2e-190 669.1 1222 37.4
BcaC03g17700 Brassica carinata HOM05D007614 ORTHO05D009538 9.5e-190 668.7 1267 36.5
PGSC0003DMG400011332 Solanum tuberosum HOM05D007614 ORTHO05D009538 4.9e-186 656.4 1078 38.9
Thecc.04G287600 Theobroma cacao HOM05D007614 ORTHO05D009538 3.1e-185 653.7 1081 40.2
Gohir.A09G063000 Gossypium hirsutum HOM05D007614 ORTHO05D009538 8.9e-180 635.6 972 41.2
Gohir.D09G062000 Gossypium hirsutum HOM05D007614 ORTHO05D009538 1.4e-177 628.2 957 41.2
Eucgr.B01588 Eucalyptus grandis HOM05D007614 ORTHO05D009538 7.3e-166 589.3 1041 37.3
Manes.03G197500 Manihot esculenta HOM05D007614 ORTHO05D009538 6.8e-164 582.8 1026 37.5
Hma1.2p1_1807F.1_g303400 Hydrangea macrophylla HOM05D007614 ORTHO05D009538 1.5e-155 555.1 729 44.3
Cpa.g.sc16.197 Carica papaya HOM05D007614 ORTHO05D009538 1.7e-154 551.6 932 38.6
Hma1.2p1_0804F.1_g220930 Hydrangea macrophylla HOM05D007614 ORTHO05D009538 9.6e-150 535.8 729 43.3
Mapoly0051s0073 Marchantia polymorpha HOM05D007614 ORTHO05D009538 3.9e-143 513.8 1272 32.2
CDE01G0153 Ceratophyllum demersum HOM05D007614 ORTHO05D009538 3.9e-135 487.3 1358 30.3
Pp3c13_17960 Physcomitrium patens HOM05D007614 ORTHO05D009538 6.7e-135 486.5 1205 31.1
AagrBONN_evm.TU.Sc2ySwM_344.1702 Anthoceros agrestis HOM05D007614 ORTHO05D009538 9.6e-134 482.6 1269 31.6
AagrBONN_evm.TU.Sc2ySwM_344.1704 Anthoceros agrestis HOM05D007614 ORTHO05D009538 9.6e-134 482.6 1269 31.6
BcaC03g17696 Brassica carinata HOM05D007614 ORTHO05D009538 1.8e-132 478.4 886 37.6
Migut.G00138 Erythranthe guttata HOM05D007614 ORTHO05D009538 1.4e-124 452.2 532 48.3
HanXRQChr03g0089461 Helianthus annuus HOM05D007614 ORTHO05D009538 8.2e-109 399.8 451 47.9
Actinidia00005 Actinidia chinensis HOM05D007614 ORTHO05D009538 1.0e-103 382.9 599 39.4
CAN.G421.11 Capsicum annuum HOM05D007614 ORTHO05D009538 1.3e-101 375.9 889 31.5
CBR_g12376 Chara braunii HOM05D007614 ORTHO05D009538 1.8e-87 328.9 1272 26.1
BcaC03g17697 Brassica carinata HOM05D007614 ORTHO05D009538 4.4e-62 244.6 351 42.7
HanXRQChr03g0089481 Helianthus annuus HOM05D007614 ORTHO05D009538 3.9e-58 231.5 286 47.2
Migut.G00137 Erythranthe guttata HOM05D007614 ORTHO05D009538 4.3e-57 228.0 610 30.8
Zm00001eb167500 Zea mays HOM05D000563 ORTHO05D009538 1.4e-52 213.0 113 96.5
MSTRG.3900 Avicennia marina HOM05D007614 ORTHO05D009538 6.2e-48 197.6 414 33.3
CAN.G421.12 Capsicum annuum HOM05D007614 ORTHO05D009538 9.9e-46 190.3 256 45.7
Cpa.g.c41899 Carica papaya HOM05D007614 ORTHO05D009538 9.9e-46 190.3 306 41.5
Cc01_g15100 Coffea canephora HOM05D007614 ORTHO05D009538 5.2e-39 167.9 163 54.6
Os03g0341200 Oryza sativa ssp. japonica HOM05D007614 ORTHO05D009538 1.4e-31 143.3 199 48.2
Eucgr.B01587 Eucalyptus grandis HOM05D007614 ORTHO05D009538 2.5e-25 122.5 233 37.8
Actinidia14288 Actinidia chinensis HOM05D007614 ORTHO05D009538 5.6e-25 121.3 120 55.8
Actinidia27756 Actinidia chinensis HOM05D007614 ORTHO05D009538 3.6e-24 118.6 120 57.5
BcaB01g01537 Brassica carinata HOM05D007614 ORTHO05D009538 2.7e-19 102.4 214 39.3
Os05g0314700 Oryza sativa ssp. japonica HOM05D007614 ORTHO05D009538 1.4e-15 90.1 120 52.5
BcaB04g20478 Brassica carinata HOM05D007614 ORTHO05D009538 6.0e-11 74.7 102 42.2
Cre07.g314700 Chlamydomonas reinhardtii HOM05D058327 ORTHO05D009538 6.9e-07 61.2 296 22.0


User provided reference genes

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