Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb014590 Zea mays HOM05D000697 ORTHO05D000169 4.0e-80 301.6 177 100.0
Zm00001eb396160 Zea mays HOM05D000697 ORTHO05D000169 1.6e-36 156.8 101 85.1
Oeu008473.1 Olea europaea HOM05D000697 ORTHO05D000169 1.1e-10 70.9 113 35.4
DCAR_005758 Daucus carota HOM05D000697 ORTHO05D000169 5.7e-10 68.6 98 39.8
Manes.05G003300 Manihot esculenta HOM05D000697 ORTHO05D000169 5.7e-10 68.6 113 38.1
MBI18_g17318_MAGBIO Magnolia biondii HOM05D000697 ORTHO05D000169 7.4e-10 68.2 114 39.5
Potri.002G196200 Populus trichocarpa HOM05D000697 ORTHO05D000169 7.4e-10 68.2 115 39.1
Potri.014G120800 Populus trichocarpa HOM05D000697 ORTHO05D000169 1.6e-09 67.0 96 40.6
Dinv10098 Davidia involucrata HOM05D000697 ORTHO05D000169 2.2e-09 66.6 98 40.8
THA.LOC104800343 Tarenaya hassleriana HOM05D000697 ORTHO05D000169 2.8e-09 66.2 113 37.2
THA.LOC104800346 Tarenaya hassleriana HOM05D000697 ORTHO05D000169 2.8e-09 66.2 113 37.2
THA.LOC104827669 Tarenaya hassleriana HOM05D000697 ORTHO05D000169 2.8e-09 66.2 113 37.2
Hma1.2p1_0212F.1_g089940 Hydrangea macrophylla HOM05D000697 ORTHO05D000169 3.7e-09 65.9 113 37.2
Manes.01G227900 Manihot esculenta HOM05D000697 ORTHO05D000169 3.7e-09 65.9 112 36.6
Cpa.g.sc18.43 Carica papaya HOM05D000697 ORTHO05D000169 4.8e-09 65.5 113 38.1
Oeu038018.1 Olea europaea HOM05D000697 ORTHO05D000169 4.8e-09 65.5 98 36.7
Solyc06g009640.2 Solanum lycopersicum HOM05D000697 ORTHO05D000169 4.8e-09 65.5 115 33.9
CDE02G3005 Ceratophyllum demersum HOM05D000697 ORTHO05D000169 6.3e-09 65.1 113 35.4
Eucgr.L01254 Eucalyptus grandis HOM05D000697 ORTHO05D000169 8.2e-09 64.7 113 37.2
MBI19_g07239_MAGBIO Magnolia biondii HOM05D000697 ORTHO05D000169 8.2e-09 64.7 98 37.8
PGR044G0370 Punica granatum HOM05D000697 ORTHO05D000169 8.2e-09 64.7 111 37.8
Sopen06g004280 Solanum pennellii HOM05D000697 ORTHO05D000169 1.1e-08 64.3 115 33.9
CDE08G1122 Ceratophyllum demersum HOM05D000697 ORTHO05D000169 1.4e-08 63.9 113 34.5
AUR62011806 Chenopodium quinoa HOM05D000697 ORTHO05D000169 1.4e-08 63.9 98 37.8
AUR62024652 Chenopodium quinoa HOM05D000697 ORTHO05D000169 1.8e-08 63.5 98 38.8
COL.COLO4_23232 Corchorus olitorius HOM05D000697 ORTHO05D000169 1.8e-08 63.5 113 35.4
TAR365G0994 Trochodendron aralioides HOM05D000697 ORTHO05D000169 1.8e-08 63.5 98 37.8
Lj5g0026084 Lotus japonicus HOM05D000697 ORTHO05D000169 2.4e-08 63.2 98 37.8
Ah.02g112290 Amaranthus hybridus HOM05D000697 ORTHO05D000169 3.1e-08 62.8 98 36.7
Aqoxy5G02880 Aquilegia oxysepala HOM05D000697 ORTHO05D000169 3.1e-08 62.8 98 36.7
PSO357G0541 Papaver somniferum HOM05D000697 ORTHO05D000169 3.1e-08 62.8 113 35.4
Duzib211G0124 Durio zibethinus HOM05D000697 ORTHO05D000169 4.1e-08 62.4 110 34.5
unitig_736.g22936 Utricularia gibba HOM05D000697 ORTHO05D000169 4.1e-08 62.4 113 33.6
Gohir.D07G132900 Gossypium hirsutum HOM05D000697 ORTHO05D000169 5.3e-08 62.0 110 35.5
Gorai.001G144200 Gossypium raimondii HOM05D000697 ORTHO05D000169 5.3e-08 62.0 110 35.5
PGR083G2421 Punica granatum HOM05D000697 ORTHO05D000169 5.3e-08 62.0 114 34.2
Sed0010222 Sechium edule HOM05D000697 ORTHO05D000169 5.3e-08 62.0 133 31.6
PGSC0003DMG400007301 Solanum tuberosum HOM05D000697 ORTHO05D000169 5.3e-08 62.0 115 33.9
Cfa005801 Carpinus fangiana HOM05D000697 ORTHO05D000169 6.9e-08 61.6 97 39.2
PSO170G1051 Papaver somniferum HOM05D000697 ORTHO05D000169 6.9e-08 61.6 113 34.5
Sabra02G0160900 Salix brachista HOM05D000697 ORTHO05D000169 6.9e-08 61.6 103 38.8
EL10As5g23530 Beta vulgaris HOM05D000697 ORTHO05D000169 9.0e-08 61.2 98 36.7
ClCG10G011390 Citrullus lanatus HOM05D000697 ORTHO05D000169 9.0e-08 61.2 135 31.1
CsaV3_4G001220 Cucumis sativus L. HOM05D000697 ORTHO05D000169 9.0e-08 61.2 115 34.8
unitig_62.g23907 Utricularia gibba HOM05D004856 ORTHO05D005710 9.0e-08 61.2 119 35.3
Ciclev10022730m.g Citrus clementina HOM05D000697 ORTHO05D000169 1.2e-07 60.8 113 33.6
MELO3C017918.2 Cucumis melo HOM05D000697 ORTHO05D000169 1.2e-07 60.8 111 36.0
Duzib133G0134 Durio zibethinus HOM05D000697 ORTHO05D000169 1.2e-07 60.8 112 36.6
Migut.D00084 Erythranthe guttata HOM05D000697 ORTHO05D000169 1.2e-07 60.8 113 32.7
PSO210G6856 Papaver somniferum HOM05D000697 ORTHO05D000169 1.2e-07 60.8 94 35.1
PSO761G0678 Papaver somniferum HOM05D000697 ORTHO05D000169 1.2e-07 60.8 95 34.7
Sed0016710 Sechium edule HOM05D000697 ORTHO05D000169 1.2e-07 60.8 91 44.0
CiPaw.07G117500 Carya illinoinensis HOM05D000697 ORTHO05D000169 1.5e-07 60.5 100 36.0
Sc17g0000450 Simmondsia chinensis HOM05D000697 ORTHO05D000169 1.5e-07 60.5 112 35.7
Actinidia20994 Actinidia chinensis HOM05D000697 ORTHO05D000169 2.0e-07 60.1 113 33.6
Duzib138G1356 Durio zibethinus HOM05D000697 ORTHO05D000169 2.0e-07 60.1 113 34.5
MD03G1295200 Malus domestica HOM05D000697 ORTHO05D000169 2.0e-07 60.1 98 39.8
CANSAT25G0922 Cannabis sativa HOM05D000697 ORTHO05D000169 2.6e-07 59.7 113 34.5
HanXRQChr04g0106071 Helianthus annuus HOM05D000697 ORTHO05D000169 2.6e-07 59.7 98 36.7
Lj1C17T9 Lonicera japonica HOM05D000697 ORTHO05D000169 2.6e-07 59.7 98 36.7
Thecc.01G313300 Theobroma cacao HOM05D000697 ORTHO05D000169 2.6e-07 59.7 114 33.3
TWI18G0286 Tripterygium wilfordii HOM05D000697 ORTHO05D000169 2.6e-07 59.7 113 35.4
Gorai.008G139700 Gossypium raimondii HOM05D000697 ORTHO05D000169 3.4e-07 59.3 98 37.8
THA.LOC104802154 Tarenaya hassleriana HOM05D000697 ORTHO05D000169 3.4e-07 59.3 96 34.4
THA.LOC104817459 Tarenaya hassleriana HOM05D000697 ORTHO05D000169 3.4e-07 59.3 113 35.4
CSS0019770 Camellia sinensis var. sinensis HOM05D000697 ORTHO05D000169 4.5e-07 58.9 98 37.8
CSS0025819 Camellia sinensis var. sinensis HOM05D000697 ORTHO05D000169 4.5e-07 58.9 98 37.8
Peaxi162Scf00058g00267 Petunia axillaris HOM05D000697 ORTHO05D000169 4.5e-07 58.9 98 35.7
Psat0s2991g0040 Pisum sativum HOM05D000697 ORTHO05D000169 4.5e-07 58.9 98 37.8
SalBow3G1328 Salvia bowleyana HOM05D000697 ORTHO05D000169 4.5e-07 58.9 114 34.2
Sed0003599 Sechium edule HOM05D000697 ORTHO05D000169 4.5e-07 58.9 117 32.5
unitig_52.g16900 Utricularia gibba HOM05D000697 ORTHO05D000169 4.5e-07 58.9 96 35.4
HPP92_003568 Vanilla planifolia HOM05D000697 ORTHO05D000169 4.5e-07 58.9 113 33.6
Actinidia25849 Actinidia chinensis HOM05D000697 ORTHO05D000169 5.9e-07 58.5 113 32.7
MSTRG.21686 Avicennia marina HOM05D000697 ORTHO05D000169 5.9e-07 58.5 113 34.5
Eucgr.K03544 Eucalyptus grandis HOM05D000697 ORTHO05D000169 5.9e-07 58.5 113 33.6
Gohir.D12G128700 Gossypium hirsutum HOM05D000697 ORTHO05D000169 5.9e-07 58.5 98 36.7
MD11G1314100 Malus domestica HOM05D000697 ORTHO05D000169 5.9e-07 58.5 98 38.8
Nitab4.5_0000363g0280 Nicotiana tabacum HOM05D000697 ORTHO05D000169 5.9e-07 58.5 113 33.6
Prupe.8G267100 Prunus persica HOM05D000697 ORTHO05D000169 5.9e-07 58.5 95 36.8
Ah.11g049250 Amaranthus hybridus HOM05D000697 ORTHO05D000169 7.7e-07 58.2 98 36.7
Aqoxy2G02770 Aquilegia oxysepala HOM05D000697 ORTHO05D000169 7.7e-07 58.2 113 32.7
Haze_05040 Corylus avellana HOM05D000697 ORTHO05D000169 7.7e-07 58.2 97 37.1
TAR636G1432 Trochodendron aralioides HOM05D000697 ORTHO05D000169 7.7e-07 58.2 98 35.7
TAR362G0901 Trochodendron aralioides HOM05D000697 ORTHO05D000169 1.3e-06 57.4 98 35.7
ATR0796G285 Amborella trichopoda HOM05D000697 ORTHO05D000169 1.7e-06 57.0 98 35.7
AT3G62420 Arabidopsis thaliana HOM05D000697 ORTHO05D000169 1.7e-06 57.0 113 34.5
ECA236G0269 Erigeron canadensis HOM05D000697 ORTHO05D000169 1.7e-06 57.0 97 36.1
Eucgr.H01022 Eucalyptus grandis HOM05D000697 ORTHO05D000169 1.7e-06 57.0 113 35.4
Nitab4.5_0003540g0010 Nicotiana tabacum HOM05D000697 ORTHO05D000169 1.7e-06 57.0 114 36.0
Nitab4.5_0008277g0020 Nicotiana tabacum HOM05D000697 ORTHO05D000169 1.7e-06 57.0 114 36.0
Rhsim01G0290700 Rhododendron simsii HOM05D000697 ORTHO05D000169 1.7e-06 57.0 98 33.7
SalBow2G3006 Salvia bowleyana HOM05D000697 ORTHO05D000169 1.7e-06 57.0 98 34.7
AL5G45220 Arabidopsis lyrata HOM05D000697 ORTHO05D000169 2.2e-06 56.6 113 34.5
Carub.0005s2914 Capsella rubella HOM05D000697 ORTHO05D000169 2.2e-06 56.6 113 34.5
Os02g0132500 Oryza sativa ssp. japonica HOM05D000697 ORTHO05D000169 2.2e-06 56.6 79 45.6
Sp5g00990 Schrenkiella parvula HOM05D000697 ORTHO05D000169 2.2e-06 56.6 113 34.5
Aa31LG10G16350 Aethionema arabicum HOM05D000697 ORTHO05D000169 2.9e-06 56.2 96 34.4
CAN.G777.13 Capsicum annuum HOM05D000697 ORTHO05D000169 2.9e-06 56.2 113 32.7
CARHR172750 Cardamine hirsuta HOM05D000697 ORTHO05D000169 2.9e-06 56.2 96 36.5
Thhalv10006418m.g Eutrema salsugineum HOM05D000697 ORTHO05D000169 2.9e-06 56.2 110 34.5
Peaxi162Scf00691g00021 Petunia axillaris HOM05D000697 ORTHO05D000169 2.9e-06 56.2 113 33.6
arahy.Tifrunner.gnm1.ann1.6JGL55 Arachis hypogaea HOM05D000697 ORTHO05D000169 3.8e-06 55.8 113 33.6
BcaB02g07337 Brassica carinata HOM05D000697 ORTHO05D000169 3.8e-06 55.8 96 36.5
CSS0031119 Camellia sinensis var. sinensis HOM05D000697 ORTHO05D000169 3.8e-06 55.8 98 36.7
Gohir.A07G128500 Gossypium hirsutum HOM05D000697 ORTHO05D000169 3.8e-06 55.8 110 34.5
Gorai.007G122800 Gossypium raimondii HOM05D000697 ORTHO05D000169 3.8e-06 55.8 114 33.3
GSVIVG01031238001 Vitis vinifera HOM05D000697 ORTHO05D000169 3.8e-06 55.8 95 38.9
Atru.chr5.1001 Acer truncatum HOM05D000697 ORTHO05D000169 5.0e-06 55.5 113 34.5
Ca_09210_v3 Cicer arietinum L. HOM05D000697 ORTHO05D000169 5.0e-06 55.5 101 36.6
Ca_20905_v3 Cicer arietinum L. HOM05D000697 ORTHO05D000169 6.5e-06 55.1 85 38.8
HPP92_013525 Vanilla planifolia HOM05D000697 ORTHO05D000169 6.5e-06 55.1 112 33.0
CAN.G1280.27 Capsicum annuum HOM05D000697 ORTHO05D000169 8.5e-06 54.7 98 32.7
Gohir.A11G110000 Gossypium hirsutum HOM05D000697 ORTHO05D000169 8.5e-06 54.7 110 35.5
HanXRQChr06g0168171 Helianthus annuus HOM05D000697 ORTHO05D000169 8.5e-06 54.7 114 35.1
Lsat_1_v5_gn_8_166781 Lactuca sativa HOM05D000697 ORTHO05D000169 8.5e-06 54.7 113 31.9
Lj5P194T61 Lonicera japonica HOM05D000697 ORTHO05D000169 8.5e-06 54.7 84 40.5
VMungo1383G1971 Vigna mungo HOM05D000697 ORTHO05D000169 8.5e-06 54.7 98 33.7


User provided reference genes

Program Settings