Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb012690 Zea mays HOM05D004429 ORTHO05D005583 3.0e-103 379.0 268 100.0
Os03g0279600 Oryza sativa ssp. japonica HOM05D004429 ORTHO05D005583 2.1e-77 293.1 226 75.7
Hma1.2p1_0350F.1_g132400 Hydrangea macrophylla HOM05D004429 ORTHO05D005583 1.3e-37 161.0 219 43.8
Hma1.2p1_1065F.1_g253770 Hydrangea macrophylla HOM05D004429 ORTHO05D005583 1.3e-37 161.0 219 43.8
ATR0222G016 Amborella trichopoda HOM05D004429 ORTHO05D005583 1.7e-37 160.6 215 44.7
MBI14_g36720_MAGBIO Magnolia biondii HOM05D004429 ORTHO05D005583 1.7e-37 160.6 220 42.7
CiPaw.10G142900 Carya illinoinensis HOM05D004429 ORTHO05D005583 4.8e-37 159.1 219 41.1
TAR369G0217 Trochodendron aralioides HOM05D004429 ORTHO05D005583 3.1e-36 156.4 213 42.3
Dinv37207 Davidia involucrata HOM05D004429 ORTHO05D005583 4.1e-36 156.0 226 39.8
AL5G34580 Arabidopsis lyrata HOM05D004429 ORTHO05D005583 1.2e-35 154.5 220 39.1
Sp5g08720 Schrenkiella parvula HOM05D004429 ORTHO05D005583 1.6e-35 154.1 223 39.5
Thecc.05G044800 Theobroma cacao HOM05D004429 ORTHO05D005583 1.6e-35 154.1 219 43.4
Nn2g10451 Nelumbo nucifera HOM05D004429 ORTHO05D005583 2.0e-35 153.7 224 44.6
QL05p010485 Quercus lobata HOM05D004429 ORTHO05D005583 2.0e-35 153.7 222 46.4
FvH4_6g14340 Fragaria vesca HOM05D004429 ORTHO05D005583 2.6e-35 153.3 235 40.4
FAN14G5191 Fragaria x ananassa HOM05D004429 ORTHO05D005583 2.6e-35 153.3 235 40.4
MD04G1120700 Malus domestica HOM05D004429 ORTHO05D005583 2.6e-35 153.3 232 42.2
Manes.12G146400 Manihot esculenta HOM05D004429 ORTHO05D005583 2.6e-35 153.3 209 41.1
PGSC0003DMG400008931 Solanum tuberosum HOM05D004429 ORTHO05D005583 2.6e-35 153.3 221 44.8
Aqoxy2G02012 Aquilegia oxysepala HOM05D004429 ORTHO05D005583 4.5e-35 152.5 158 48.7
FAN02G4491 Fragaria x ananassa HOM05D004429 ORTHO05D005583 4.5e-35 152.5 234 39.7
Nn2g12909 Nelumbo nucifera HOM05D004429 ORTHO05D005583 4.5e-35 152.5 216 41.2
Lj2C100T9 Lonicera japonica HOM05D004429 ORTHO05D005583 5.9e-35 152.1 220 40.5
RcHm_v2.0_Chr3g0467391 Rosa chinensis HOM05D004429 ORTHO05D005583 5.9e-35 152.1 238 44.1
CSS0043629 Camellia sinensis var. sinensis HOM05D004429 ORTHO05D005583 7.7e-35 151.8 221 43.9
Gohir.D11G344900 Gossypium hirsutum HOM05D004429 ORTHO05D005583 7.7e-35 151.8 214 43.9
Gorai.007G375300 Gossypium raimondii HOM05D004429 ORTHO05D005583 7.7e-35 151.8 214 43.9
PGR004G1112 Punica granatum HOM05D004429 ORTHO05D005583 7.7e-35 151.8 220 41.8
Sabra06G0062200 Salix brachista HOM05D004429 ORTHO05D005583 7.7e-35 151.8 214 46.3
CSS0012060 Camellia sinensis var. sinensis HOM05D004429 ORTHO05D005583 1.0e-34 151.4 213 42.7
PSO339G1692 Papaver somniferum HOM05D004429 ORTHO05D005583 1.0e-34 151.4 237 38.4
Carub.0005s2021 Capsella rubella HOM05D004429 ORTHO05D005583 1.3e-34 151.0 220 38.6
Gohir.A11G326000 Gossypium hirsutum HOM05D004429 ORTHO05D005583 1.3e-34 151.0 214 43.9
QL07p047160 Quercus lobata HOM05D004429 ORTHO05D005583 1.3e-34 151.0 224 45.5
SalBow3G1038 Salvia bowleyana HOM05D004429 ORTHO05D005583 1.3e-34 151.0 231 40.7
GSVIVG01025623001 Vitis vinifera HOM05D004429 ORTHO05D005583 1.7e-34 150.6 215 40.9
FAN05G1703 Fragaria x ananassa HOM05D004429 ORTHO05D005583 2.2e-34 150.2 230 39.6
MD12G1138000 Malus domestica HOM05D004429 ORTHO05D005583 2.2e-34 150.2 227 41.4
CARHR163560 Cardamine hirsuta HOM05D004429 ORTHO05D005583 2.9e-34 149.8 218 39.4
Lsat_1_v5_gn_6_32421 Lactuca sativa HOM05D004429 ORTHO05D005583 2.9e-34 149.8 244 41.4
Solyc09g010390.2 Solanum lycopersicum HOM05D004429 ORTHO05D005583 3.8e-34 149.4 221 45.7
MSTRG.19104 Avicennia marina HOM05D004429 ORTHO05D005583 5.0e-34 149.1 219 47.9
Cc06_g03000 Coffea canephora HOM05D004429 ORTHO05D005583 5.0e-34 149.1 223 47.1
Prupe.6G250000 Prunus persica HOM05D004429 ORTHO05D005583 5.0e-34 149.1 216 40.7
PSO648G0090 Papaver somniferum HOM05D004429 ORTHO05D005583 6.5e-34 148.7 237 38.0
AT3G53630 Arabidopsis thaliana HOM05D004429 ORTHO05D005583 8.5e-34 148.3 222 38.7
Aa31LG5G22900 Aethionema arabicum HOM05D004429 ORTHO05D005583 1.1e-33 147.9 219 38.4
A04p05960 Brassica napus HOM05D004429 ORTHO05D005583 1.5e-33 147.5 217 43.3
BraA04t16299Z Brassica rapa HOM05D001071 ORTHO05D005583 1.5e-33 147.5 217 43.3
Thhalv10010743m.g Eutrema salsugineum HOM05D004429 ORTHO05D005583 1.5e-33 147.5 219 39.7
HanXRQChr14g0459271 Helianthus annuus HOM05D004429 ORTHO05D005583 1.9e-33 147.1 223 39.5
Oeu024364.1 Olea europaea HOM05D004429 ORTHO05D005583 1.9e-33 147.1 241 40.7
Potri.006G082400 Populus trichocarpa HOM05D004429 ORTHO05D005583 1.9e-33 147.1 218 44.5
FAN09G1286 Fragaria x ananassa HOM05D004429 ORTHO05D005583 2.5e-33 146.7 234 38.9
Sopen09g005130 Solanum pennellii HOM05D004429 ORTHO05D005583 2.5e-33 146.7 216 45.8
BolC8t50499H Brassica oleracea HOM05D004429 ORTHO05D005583 3.2e-33 146.4 223 39.9
Duzib106G0640 Durio zibethinus HOM05D004429 ORTHO05D005583 3.2e-33 146.4 220 40.0
Duzib128G1460 Durio zibethinus HOM05D004429 ORTHO05D005583 4.2e-33 146.0 217 41.5
THA.LOC104823424 Tarenaya hassleriana HOM05D004429 ORTHO05D005583 4.2e-33 146.0 211 39.3
Nitab4.5_0000216g0050 Nicotiana tabacum HOM05D004429 ORTHO05D005583 5.5e-33 145.6 215 44.2
Aa31LG10G9470 Aethionema arabicum HOM05D004429 ORTHO05D005583 7.2e-33 145.2 215 38.6
EL10Ac1g02077 Beta vulgaris HOM05D004429 ORTHO05D005583 9.4e-33 144.8 213 41.3
BcaB02g08517 Brassica carinata HOM05D004429 ORTHO05D005583 9.4e-33 144.8 218 41.3
THA.LOC104806580 Tarenaya hassleriana HOM05D004429 ORTHO05D005583 9.4e-33 144.8 223 40.4
BcaC02g09143 Brassica carinata HOM05D004429 ORTHO05D005583 1.6e-32 144.1 222 40.5
BolC4t25460H Brassica oleracea HOM05D004429 ORTHO05D005583 1.6e-32 144.1 222 40.5
Oeu060052.2 Olea europaea HOM05D004429 ORTHO05D005583 1.6e-32 144.1 241 39.8
Sc20g0004500 Simmondsia chinensis HOM05D004429 ORTHO05D005583 1.6e-32 144.1 226 41.2
SGA_v2.0_scaffold126G33824 Striga asiatica HOM05D004429 ORTHO05D005583 1.6e-32 144.1 221 42.1
Ciclev10013673m.g Citrus clementina HOM05D004429 ORTHO05D005583 2.1e-32 143.7 226 43.8
TWI53G0393 Tripterygium wilfordii HOM05D004429 ORTHO05D005583 2.1e-32 143.7 217 38.7
C04p38880 Brassica napus HOM05D001071 ORTHO05D005583 2.7e-32 143.3 222 40.5
MELO3C009280.2 Cucumis melo HOM05D004429 ORTHO05D005583 2.7e-32 143.3 228 40.4
Eucgr.K03161 Eucalyptus grandis HOM05D004429 ORTHO05D005583 2.7e-32 143.3 200 46.0
Glyma.03G172600 Glycine max HOM05D004429 ORTHO05D005583 2.7e-32 143.3 225 37.3
Gohir.A09G158500 Gossypium hirsutum HOM05D004429 ORTHO05D005583 2.7e-32 143.3 214 40.2
TWI74G1196 Tripterygium wilfordii HOM05D004429 ORTHO05D005583 2.7e-32 143.3 215 38.6
BcaB01g00258 Brassica carinata HOM05D004429 ORTHO05D005583 3.6e-32 142.9 215 41.9
BraA09t40127Z Brassica rapa HOM05D004429 ORTHO05D005583 3.6e-32 142.9 215 38.6
CsaV3_3G035100 Cucumis sativus L. HOM05D004429 ORTHO05D005583 3.6e-32 142.9 228 42.5
CAN.G97.23 Capsicum annuum HOM05D004429 ORTHO05D005583 8.0e-32 141.7 219 37.4
ClCG10G020910 Citrullus lanatus HOM05D004429 ORTHO05D005583 8.0e-32 141.7 224 42.4
A09p46640 Brassica napus HOM05D004429 ORTHO05D005583 1.0e-31 141.4 215 39.5
Sed0001771 Sechium edule HOM05D004429 ORTHO05D005583 1.0e-31 141.4 231 43.3
COL.COLO4_14858 Corchorus olitorius HOM05D004429 ORTHO05D005583 1.4e-31 141.0 232 39.2
Phvul.001G170200 Phaseolus vulgaris HOM05D004429 ORTHO05D005583 1.4e-31 141.0 220 40.9
PGSC0003DMG400010996 Solanum tuberosum HOM05D004429 ORTHO05D005583 1.4e-31 141.0 169 47.9
C08p28960 Brassica napus HOM05D004429 ORTHO05D005583 1.8e-31 140.6 223 39.0
Gorai.006G175400 Gossypium raimondii HOM05D004429 ORTHO05D005583 1.8e-31 140.6 214 39.7
Nitab4.5_0012047g0010 Nicotiana tabacum HOM05D004429 ORTHO05D005583 1.8e-31 140.6 197 47.2
Sopen10g034060 Solanum pennellii HOM05D004429 ORTHO05D005583 1.8e-31 140.6 219 37.4
AUR62013875 Chenopodium quinoa HOM05D004429 ORTHO05D005583 2.3e-31 140.2 222 40.5
Glyma.19G173500 Glycine max HOM05D004429 ORTHO05D005583 2.3e-31 140.2 218 39.9
DCAR_014836 Daucus carota HOM05D004429 ORTHO05D005583 3.0e-31 139.8 215 39.5
Peaxi162Scf00604g00415 Petunia axillaris HOM05D004429 ORTHO05D005583 3.0e-31 139.8 219 43.4
Ah.01g015860 Amaranthus hybridus HOM05D004429 ORTHO05D005583 4.0e-31 139.4 201 40.3
Migut.J00365 Erythranthe guttata HOM05D004429 ORTHO05D005583 4.0e-31 139.4 230 37.8
arahy.Tifrunner.gnm1.ann1.2JSS8R Arachis hypogaea HOM05D004429 ORTHO05D005583 6.8e-31 138.7 164 48.2
BcaC07g39724 Brassica carinata HOM05D004429 ORTHO05D005583 6.8e-31 138.7 196 40.3
CDE04G3062 Ceratophyllum demersum HOM05D004429 ORTHO05D005583 6.8e-31 138.7 191 44.0
HPP92_001685 Vanilla planifolia HOM05D004429 ORTHO05D005583 6.8e-31 138.7 218 37.2
Gohir.D09G153900 Gossypium hirsutum HOM05D004429 ORTHO05D005583 1.2e-30 137.9 214 39.3
Nitab4.5_0002077g0140 Nicotiana tabacum HOM05D004429 ORTHO05D005583 2.0e-30 137.1 155 54.2
CAN.G688.9 Capsicum annuum HOM05D004429 ORTHO05D005583 4.4e-30 136.0 142 45.8
Solyc10g084620.3 Solanum lycopersicum HOM05D004429 ORTHO05D005583 4.4e-30 136.0 214 37.4
SEGI_33598 Sequoiadendron giganteum HOM05D004429 ORTHO05D005583 5.7e-30 135.6 219 37.4
AUR62036719 Chenopodium quinoa HOM05D004429 ORTHO05D005583 9.7e-30 134.8 160 45.6
Nitab4.5_0000202g0130 Nicotiana tabacum HOM05D004429 ORTHO05D005583 9.7e-30 134.8 198 44.9
Sed0027367 Sechium edule HOM05D004429 ORTHO05D005583 9.7e-30 134.8 221 44.3
MSTRG.5688 Avicennia marina HOM05D004429 ORTHO05D005583 1.3e-29 134.4 229 43.2
ECA233G0195 Erigeron canadensis HOM05D004429 ORTHO05D005583 1.3e-29 134.4 150 42.7
CiPaw.09G188700 Carya illinoinensis HOM05D004429 ORTHO05D005583 3.7e-29 132.9 142 47.2
Lsat_1_v5_gn_2_110581 Lactuca sativa HOM05D004429 ORTHO05D005583 3.7e-29 132.9 210 34.8
VMungo1383G1968 Vigna mungo HOM05D004429 ORTHO05D005583 1.1e-28 131.3 207 40.6
Lj1g0006432 Lotus japonicus HOM05D004429 ORTHO05D005583 2.4e-28 130.2 229 44.1
Migut.L01619 Erythranthe guttata HOM05D004429 ORTHO05D005583 3.1e-28 129.8 193 39.9
ATR0222G031 Amborella trichopoda HOM05D004429 ORTHO05D005583 5.3e-28 129.0 192 41.7
Lalb_Chr20g0113181 Lupinus albus HOM05D004429 ORTHO05D005583 9.1e-28 128.3 224 39.7
SEGI_08514 Sequoiadendron giganteum HOM05D004429 ORTHO05D005583 1.3e-26 124.4 161 37.3
SHI12608 Sapria himalayana HOM05D004429 ORTHO05D000003 5.0e-26 122.5 153 43.8
CBR_g20121 Chara braunii HOM05D004429 ORTHO05D005583 1.1e-25 121.3 85 61.2
unitig_26.g9203 Utricularia gibba HOM05D004429 ORTHO05D005583 1.1e-25 121.3 85 61.2
Aqoxy3G04288 Aquilegia oxysepala HOM05D004429 ORTHO05D005583 2.7e-24 116.7 84 57.1
Atru.chr8.1930 Acer truncatum HOM05D004429 ORTHO05D005583 8.0e-24 115.2 162 42.6
unitig_578.g15706 Utricularia gibba HOM05D004429 ORTHO05D005583 8.0e-24 115.2 144 41.7
SGA_v2.0_scaffold87G27174 Striga asiatica HOM05D004429 ORTHO05D005583 1.8e-23 114.0 76 67.1
Medtr7g099970 Medicago truncatula HOM05D004429 ORTHO05D005583 8.8e-23 111.7 121 43.8
TPR.G11987 Trifolium pratense HOM05D004429 ORTHO05D005583 1.2e-22 111.3 205 34.1
Haze_24041 Corylus avellana HOM05D004429 ORTHO05D005583 2.6e-22 110.2 110 44.5
Ca_08790_v3 Cicer arietinum L. HOM05D004429 ORTHO05D005583 7.5e-22 108.6 130 41.5
QL01p033097 Quercus lobata HOM05D004429 ORTHO05D005583 7.5e-22 108.6 81 51.9
Rhsim05G0188000 Rhododendron simsii HOM05D004429 ORTHO05D005583 9.8e-22 108.2 71 66.2
COL.COLO4_24433 Corchorus olitorius HOM05D004429 ORTHO05D005583 6.3e-21 105.5 149 37.6
Atru.chr7.899 Acer truncatum HOM05D004429 ORTHO05D005583 1.1e-20 104.8 106 50.0
Atru.chr3.3828 Acer truncatum HOM05D004429 ORTHO05D005583 1.2e-19 101.3 78 48.7
SMO348G0079 Selaginella moellendorffii HOM05D004429 ORTHO05D005583 2.0e-19 100.5 84 50.0
Ciclev10029396m.g Citrus clementina HOM05D004429 ORTHO05D005583 1.0e-18 98.2 78 47.4
MBI18_g47300_MAGBIO Magnolia biondii HOM05D004429 ORTHO05D005583 1.7e-18 97.4 133 42.9
Mapoly0066s0057 Marchantia polymorpha HOM05D004429 ORTHO05D005583 2.3e-18 97.1 83 54.2
MBI06_g43519_MAGBIO Magnolia biondii HOM05D004429 ORTHO05D005583 1.5e-17 94.4 133 42.1
SEGI_24259 Sequoiadendron giganteum HOM05D004429 ORTHO05D005583 1.5e-17 94.4 99 45.5
Pp3c4_10520 Physcomitrium patens HOM05D004429 ORTHO05D005583 1.6e-16 90.9 84 51.2
Pp3c15_19860 Physcomitrium patens HOM05D004429 ORTHO05D005583 1.8e-15 87.4 84 48.8
Psat3g048680 Pisum sativum HOM05D004429 ORTHO05D005583 5.2e-15 85.9 129 35.7
Pp3c9_19700 Physcomitrium patens HOM05D004429 ORTHO05D005583 6.8e-15 85.5 84 47.6
Actinidia05294 Actinidia chinensis HOM05D004429 ORTHO05D005583 9.8e-14 81.6 110 40.9
DCAR_017884 Daucus carota HOM05D004429 ORTHO05D005583 2.0e-11 73.9 128 36.7
TPR.G8932 Trifolium pratense HOM05D004429 ORTHO05D005583 1.3e-10 71.2 92 34.8
CDE07G1713 Ceratophyllum demersum HOM05D004429 ORTHO05D005583 2.3e-10 70.5 81 38.3
TPR.G14114 Trifolium pratense HOM05D004429 ORTHO05D005583 2.8e-08 63.5 127 37.8
Sopen04g022580 Solanum pennellii HOM05D004429 ORTHO05D005583 6.1e-08 62.4 32 68.8
EL10Ac5g11422 Beta vulgaris HOM05D004429 ORTHO05D005583 8.9e-07 58.5 120 36.7


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