Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb009710 Zea mays HOM05D000310 ORTHO05D443031 1.3e-42 176.4 119 100.0
Zm00001eb073180 Zea mays HOM05D000310 ORTHO05D000509 2.1e-29 132.5 75 89.3
Zm00001eb428460 Zea mays HOM05D000310 ORTHO05D000509 2.8e-29 132.1 118 65.3
Os04g0578800 Oryza sativa ssp. japonica HOM05D000310 ORTHO05D000509 1.5e-11 73.2 41 80.5
Zm00001eb250680 Zea mays HOM05D000310 ORTHO05D000509 2.6e-11 72.4 92 43.5
Os02g0681100 Oryza sativa ssp. japonica HOM05D000310 ORTHO05D000509 1.1e-09 67.0 91 40.7
CAN.G1265.3 Capsicum annuum HOM05D000310 ORTHO05D000509 1.5e-06 56.6 40 60.0
Nitab4.5_0000182g0100 Nicotiana tabacum HOM05D000310 ORTHO05D000509 2.0e-06 56.2 41 65.9
Oeu031427.1 Olea europaea HOM05D000310 ORTHO05D000509 2.0e-06 56.2 66 42.4
HPP92_025631 Vanilla planifolia HOM05D000310 ORTHO05D000509 2.0e-06 56.2 79 40.5
Atru.chr3.3754 Acer truncatum HOM05D000310 ORTHO05D000509 4.4e-06 55.1 47 59.6
arahy.Tifrunner.gnm1.ann1.I8LTJT Arachis hypogaea HOM05D000310 ORTHO05D000509 4.4e-06 55.1 41 61.0
arahy.Tifrunner.gnm1.ann1.XYHU2D Arachis hypogaea HOM05D000310 ORTHO05D000509 4.4e-06 55.1 41 61.0
MSTRG.11962 Avicennia marina HOM05D000310 ORTHO05D000509 4.4e-06 55.1 39 61.5
MSTRG.1849 Avicennia marina HOM05D000310 ORTHO05D000509 7.4e-06 54.3 89 41.6
Nitab4.5_0000270g0150 Nicotiana tabacum HOM05D000310 ORTHO05D000509 7.4e-06 54.3 41 63.4
Phvul.002G159100 Phaseolus vulgaris HOM05D000310 ORTHO05D000509 7.4e-06 54.3 85 43.5
SGA_v2.0_scaffold111G31483 Striga asiatica HOM05D000310 ORTHO05D000509 7.4e-06 54.3 40 60.0
unitig_748.g8110 Utricularia gibba HOM05D000310 ORTHO05D000509 7.4e-06 54.3 83 41.0
CAN.G532.16 Capsicum annuum HOM05D000310 ORTHO05D000509 9.7e-06 53.9 36 61.1
Lsat_1_v5_gn_6_4840 Lactuca sativa HOM05D000310 ORTHO05D000509 9.7e-06 53.9 43 51.2
Nitab4.5_0000769g0200 Nicotiana tabacum HOM05D000310 ORTHO05D000509 9.7e-06 53.9 49 49.0
PGSC0003DMG400005007 Solanum tuberosum HOM05D000310 ORTHO05D000509 9.7e-06 53.9 36 63.9


User provided reference genes

Program Settings