Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb009390 Zea mays HOM05D000102 ORTHO05D446799 3.5e-73 278.1 132 100.0
Zm00001eb399530 Zea mays HOM05D000102 ORTHO05D000138 3.4e-20 102.1 126 52.4
Os03g0233200 Oryza sativa ssp. japonica HOM05D000102 ORTHO05D000138 3.6e-17 92.0 123 46.3
Os05g0538500 Oryza sativa ssp. japonica HOM05D000102 ORTHO05D297721 7.2e-10 67.8 58 56.9
CARHR068340 Cardamine hirsuta HOM05D000102 ORTHO05D000138 4.0e-08 62.0 118 32.2
AL2G34910 Arabidopsis lyrata HOM05D000102 ORTHO05D000138 5.2e-08 61.6 116 31.0
AT1G75030 Arabidopsis thaliana HOM05D000102 ORTHO05D000138 5.2e-08 61.6 116 31.0
Carub.0002s2181 Capsella rubella HOM05D000102 ORTHO05D000138 8.8e-08 60.8 116 30.2
Hma1.2p1_0929F.1_g237890 Hydrangea macrophylla HOM05D000102 ORTHO05D000138 1.2e-07 60.5 60 50.0
A07p40650 Brassica napus HOM05D000102 ORTHO05D020050 2.0e-07 59.7 116 31.9
Rhsim07G0235200 Rhododendron simsii HOM05D000102 ORTHO05D000138 2.6e-07 59.3 121 33.9
BcaC08g46967 Brassica carinata HOM05D000102 ORTHO05D000138 1.3e-06 57.0 127 29.1
Lj5g0014283 Lotus japonicus HOM05D000102 ORTHO05D000138 1.3e-06 57.0 118 33.1
Aa31LG4G7820 Aethionema arabicum HOM05D000102 ORTHO05D003793 6.3e-06 54.7 60 40.0


User provided reference genes

Program Settings