Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb006240 Zea mays HOM05D009296 ORTHO05D010828 1.3e-281 972.6 586 100.0
Zm00001eb029830 Zea mays HOM05D009296 ORTHO05D010828 2.0e-173 613.2 477 85.7
Zm00001eb084650 Zea mays HOM05D009296 ORTHO05D010828 3.1e-145 519.6 407 86.7
Zm00001eb354130 Zea mays HOM05D009296 ORTHO05D010828 5.8e-144 515.4 406 84.7
Zm00001eb176390 Zea mays HOM05D009296 ORTHO05D010828 3.1e-105 386.7 202 94.6
Zm00001eb423000 Zea mays HOM05D009296 ORTHO05D010828 1.6e-88 331.3 210 81.4
Zm00001eb385530 Zea mays HOM05D009296 ORTHO05D010828 9.1e-73 278.9 155 89.7
Zm00001eb029820 Zea mays HOM05D009296 ORTHO05D445359 3.8e-71 273.5 159 87.4
Zm00001eb354120 Zea mays HOM05D009296 ORTHO05D445205 4.4e-51 206.8 159 71.7
Zm00001eb421750 Zea mays HOM05D009296 ORTHO05D441924 7.5e-51 206.1 159 70.4
Zm00001eb084640 Zea mays HOM05D009296 ORTHO05D445529 9.8e-51 205.7 159 71.1
Zm00001eb385550 Zea mays HOM05D009296 ORTHO05D446658 7.3e-46 189.5 131 76.3
Zm00001eb132810 Zea mays HOM05D009296 ORTHO05D443958 2.1e-45 188.0 106 85.8
Zm00001eb411310 Zea mays HOM05D009296 ORTHO05D010828 2.8e-45 187.6 251 65.3
Zm00001eb053270 Zea mays HOM05D009296 ORTHO05D442999 1.6e-40 171.8 130 70.8
Zm00001eb132800 Zea mays HOM05D009296 ORTHO05D010828 1.6e-40 171.8 362 39.5
Zm00001eb176540 Zea mays HOM05D009009 ORTHO05D010828 2.5e-22 111.3 213 34.3
Zm00001eb276390 Zea mays HOM05D009009 ORTHO05D010828 3.3e-22 110.9 213 34.3
Os02g0241300 Oryza sativa ssp. japonica HOM05D009009 ORTHO05D010828 1.1e-20 105.9 152 38.8
Zm00001eb019990 Zea mays HOM05D009009 ORTHO05D010828 4.0e-20 104.0 206 33.5
Zm00001eb278490 Zea mays HOM05D009009 ORTHO05D010828 6.9e-20 103.2 157 38.2
Zm00001eb384030 Zea mays HOM05D009009 ORTHO05D016371 5.8e-19 100.1 160 36.9
Zm00001eb308100 Zea mays HOM05D009009 ORTHO05D010828 2.2e-18 98.2 186 32.8
Os02g0583500 Oryza sativa ssp. japonica HOM05D009009 ORTHO05D010828 4.9e-18 97.1 157 36.9
Os11g0519100 Oryza sativa ssp. japonica HOM05D009009 ORTHO05D010828 4.9e-18 97.1 213 31.9
Os04g0519100 Oryza sativa ssp. japonica HOM05D009009 ORTHO05D010828 1.9e-17 95.1 165 33.9
Zm00001eb417100 Zea mays HOM05D009009 ORTHO05D010828 1.3e-15 89.0 153 34.6
Os06g0240600 Oryza sativa ssp. japonica HOM05D009009 ORTHO05D010828 2.3e-15 88.2 142 35.2
Os06g0271400 Oryza sativa ssp. japonica HOM05D009009 ORTHO05D010828 1.1e-14 85.9 154 36.4
PGSC0003DMG400001138 Solanum tuberosum HOM05D008892 ORTHO05D010661 1.5e-11 75.5 153 32.0
COL.COLO4_19832 Corchorus olitorius HOM05D015286 ORTHO05D000669 1.1e-09 69.3 182 28.0
Os04g0228600 Oryza sativa ssp. japonica HOM05D009009 ORTHO05D010828 1.6e-08 65.5 133 28.6
Ah.01g006000 Amaranthus hybridus HOM05D008455 ORTHO05D009597 3.5e-08 64.3 106 41.5
Dinv13764 Davidia involucrata HOM05D011313 ORTHO05D013316 4.6e-08 63.9 190 26.3
Zm00001eb341730 Zea mays HOM05D009009 ORTHO05D010828 7.9e-08 63.2 160 30.6
Ah.06g194520 Amaranthus hybridus HOM05D000711 ORTHO05D000545 5.1e-07 60.5 63 52.4
SGA_v2.0_scaffold752G53551 Striga asiatica HOM05D025956 ORTHO05D000669 7.4e-06 56.6 204 27.5


User provided reference genes

Program Settings