Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb005260 Zea mays HOM05D004214 ORTHO05D004963 1.9e-83 312.4 153 100.0
Zm00001eb402430 Zea mays HOM05D004214 ORTHO05D004963 2.5e-22 109.4 56 94.6
Os03g0168300 Oryza sativa ssp. japonica HOM05D004214 ORTHO05D004963 3.5e-16 89.0 56 76.8
TWI60G1366 Tripterygium wilfordii HOM05D004214 ORTHO05D004963 2.1e-08 63.2 55 54.5
SalBow1G5883 Salvia bowleyana HOM05D004214 ORTHO05D004963 4.6e-08 62.0 55 52.7
TAR629G3302 Trochodendron aralioides HOM05D004214 ORTHO05D004963 4.6e-08 62.0 60 55.0
GSVIVG01011460001 Vitis vinifera HOM05D004214 ORTHO05D004963 4.6e-08 62.0 55 54.5
HanXRQChr15g0487741 Helianthus annuus HOM05D004214 ORTHO05D004963 6.0e-08 61.6 55 52.7
Gohir.D07G212700 Gossypium hirsutum HOM05D004214 ORTHO05D004963 1.0e-07 60.8 55 54.5
Gorai.001G240700 Gossypium raimondii HOM05D004214 ORTHO05D004963 1.3e-07 60.5 55 54.5
ECA232G2753 Erigeron canadensis HOM05D004214 ORTHO05D005214 2.3e-07 59.7 56 55.4
Dinv11505 Davidia involucrata HOM05D004214 ORTHO05D004963 3.0e-07 59.3 55 54.5
Eucgr.I02016 Eucalyptus grandis HOM05D004214 ORTHO05D004963 3.9e-07 58.9 55 50.9
TWI34G0797 Tripterygium wilfordii HOM05D004214 ORTHO05D004963 6.6e-07 58.2 55 49.1
TWI34G1333 Tripterygium wilfordii HOM05D004214 ORTHO05D004963 6.6e-07 58.2 55 49.1
Sc10g0003430 Simmondsia chinensis HOM05D004214 ORTHO05D004963 8.6e-07 57.8 55 52.7
Atru.chr8.322 Acer truncatum HOM05D004214 ORTHO05D004963 1.1e-06 57.4 55 50.9
SGA_v2.0_scaffold413G51175 Striga asiatica HOM05D004214 ORTHO05D004963 1.1e-06 57.4 55 50.9
Actinidia06102 Actinidia chinensis HOM05D004214 ORTHO05D004963 1.5e-06 57.0 55 50.9
PGR083G1063 Punica granatum HOM05D004214 ORTHO05D004963 1.5e-06 57.0 53 47.2
Potri.017G087500 Populus trichocarpa HOM05D004214 ORTHO05D004963 1.9e-06 56.6 55 50.9
PGSC0003DMG400025136 Solanum tuberosum HOM05D004214 ORTHO05D004963 1.9e-06 56.6 55 50.9
Ciclev10012515m.g Citrus clementina HOM05D004214 ORTHO05D004963 2.5e-06 56.2 55 49.1
PGSC0003DMG401001341 Solanum tuberosum HOM05D004214 ORTHO05D004963 2.5e-06 56.2 55 41.8
THA.LOC104805483 Tarenaya hassleriana HOM05D004214 ORTHO05D004963 2.5e-06 56.2 55 47.3
CAN.G979.5 Capsicum annuum HOM05D004214 ORTHO05D004963 4.3e-06 55.5 55 49.1
DCAR_011079 Daucus carota HOM05D004214 ORTHO05D004963 4.3e-06 55.5 55 50.9
Duzib147G0992 Durio zibethinus HOM05D004214 ORTHO05D004963 4.3e-06 55.5 47 48.9
MSTRG.23916 Avicennia marina HOM05D004214 ORTHO05D004963 5.6e-06 55.1 55 52.7
Lsat_1_v5_gn_4_169740 Lactuca sativa HOM05D004214 ORTHO05D004963 7.3e-06 54.7 55 47.3
Oeu010226.1 Olea europaea HOM05D004214 ORTHO05D004963 7.3e-06 54.7 55 45.5
Oeu010227.1 Olea europaea HOM05D004214 ORTHO05D004963 7.3e-06 54.7 55 45.5
Manes.02G048700 Manihot esculenta HOM05D004214 ORTHO05D004963 9.6e-06 54.3 55 50.9
PGSC0003DMG402001341 Solanum tuberosum HOM05D004214 ORTHO05D004963 9.6e-06 54.3 55 38.2


User provided reference genes

Program Settings