Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb002880 Zea mays HOM05D004492 ORTHO05D005602 5.8e-121 437.6 221 100.0
Zm00001eb216690 Zea mays HOM05D004492 ORTHO05D005602 5.0e-48 195.3 148 68.9
Zm00001eb393760 Zea mays HOM05D004492 ORTHO05D005602 5.5e-47 191.8 128 74.2
Dinv27371 Davidia involucrata HOM05D004492 ORTHO05D005602 6.0e-25 118.6 153 47.1
Nn5g28099 Nelumbo nucifera HOM05D004492 ORTHO05D005602 3.0e-24 116.3 155 46.5
HPP92_009359 Vanilla planifolia HOM05D004492 ORTHO05D005602 1.2e-22 110.9 149 41.6
Duzib093G1652 Durio zibethinus HOM05D004492 ORTHO05D005602 3.6e-22 109.4 153 43.1
Zm00001eb146280 Zea mays HOM05D005760 ORTHO05D007113 4.7e-22 109.0 58 94.8
HanXRQChr05g0149221 Helianthus annuus HOM05D004492 ORTHO05D005602 6.2e-22 108.6 153 42.5
Manes.18G073743 Manihot esculenta HOM05D004492 ORTHO05D005602 8.1e-22 108.2 155 43.2
Actinidia29442 Actinidia chinensis HOM05D004492 ORTHO05D005602 1.1e-21 107.8 153 45.8
Lalb_Chr08g0241631 Lupinus albus HOM05D004492 ORTHO05D005602 2.3e-21 106.7 152 43.4
Migut.C01175 Erythranthe guttata HOM05D004492 ORTHO05D005602 3.1e-21 106.3 155 41.9
CsaV3_5G023260 Cucumis sativus L. HOM05D004492 ORTHO05D005602 5.2e-21 105.5 153 42.5
TWI12G1231 Tripterygium wilfordii HOM05D004492 ORTHO05D005602 5.2e-21 105.5 152 42.1
CSS0028158 Camellia sinensis var. sinensis HOM05D004492 ORTHO05D005602 8.9e-21 104.8 153 43.8
CSS0038302 Camellia sinensis var. sinensis HOM05D004492 ORTHO05D005602 8.9e-21 104.8 153 43.8
ECA246G3183 Erigeron canadensis HOM05D004492 ORTHO05D005602 8.9e-21 104.8 155 42.6
Potri.005G173100 Populus trichocarpa HOM05D004492 ORTHO05D005602 8.9e-21 104.8 153 41.8
Sabra05G0130600 Salix brachista HOM05D004492 ORTHO05D005602 2.6e-20 103.2 157 41.4
Gohir.D02G081500 Gossypium hirsutum HOM05D004492 ORTHO05D005602 3.4e-20 102.8 108 50.9
Rhsim11G0066100 Rhododendron simsii HOM05D004492 ORTHO05D005602 3.4e-20 102.8 153 41.8
Sed0009263 Sechium edule HOM05D004492 ORTHO05D005602 3.4e-20 102.8 151 43.0
Haze_00500 Corylus avellana HOM05D004492 ORTHO05D005602 4.4e-20 102.4 108 51.9
PSO170G3797 Papaver somniferum HOM05D004492 ORTHO05D005602 4.4e-20 102.4 108 49.1
QL09p035929 Quercus lobata HOM05D004492 ORTHO05D005602 4.4e-20 102.4 156 41.7
arahy.Tifrunner.gnm1.ann1.WF7TJ5 Arachis hypogaea HOM05D004492 ORTHO05D005602 5.8e-20 102.1 158 41.1
MELO3C003048.2 Cucumis melo HOM05D004492 ORTHO05D005602 5.8e-20 102.1 151 42.4
Lsat_1_v5_gn_6_109160 Lactuca sativa HOM05D004492 ORTHO05D005602 5.8e-20 102.1 152 42.1
Psat5g133640 Pisum sativum HOM05D004492 ORTHO05D005602 7.5e-20 101.7 154 42.9
PGSC0003DMG400017559 Solanum tuberosum HOM05D004492 ORTHO05D005602 7.5e-20 101.7 153 43.1
Ca_15216_v3 Cicer arietinum L. HOM05D004492 ORTHO05D005602 9.8e-20 101.3 154 42.9
MSTRG.25402 Avicennia marina HOM05D004492 ORTHO05D005602 1.3e-19 100.9 153 41.8
Gorai.005G091200 Gossypium raimondii HOM05D004492 ORTHO05D005602 1.3e-19 100.9 110 50.9
Sopen06g020530 Solanum pennellii HOM05D004492 ORTHO05D005602 1.3e-19 100.9 153 43.8
CDE11G0913 Ceratophyllum demersum HOM05D004492 ORTHO05D005602 1.7e-19 100.5 153 41.2
ClCG03G009360 Citrullus lanatus HOM05D004492 ORTHO05D005602 1.7e-19 100.5 151 41.7
Ciclev10001105m.g Citrus clementina HOM05D004492 ORTHO05D005602 1.7e-19 100.5 154 42.9
ATR0684G004 Amborella trichopoda HOM05D004492 ORTHO05D005602 2.9e-19 99.8 106 52.8
Lj1g0007587 Lotus japonicus HOM05D004492 ORTHO05D005602 2.9e-19 99.8 131 44.3
TPR.G22341 Trifolium pratense HOM05D004492 ORTHO05D005602 2.9e-19 99.8 152 42.8
Gohir.A02G074300 Gossypium hirsutum HOM05D004492 ORTHO05D005602 3.7e-19 99.4 155 42.6
Hund27046 Selenicereus undatus HOM05D004492 ORTHO05D005602 3.7e-19 99.4 110 46.4
CAN.G1396.8 Capsicum annuum HOM05D004492 ORTHO05D005602 4.9e-19 99.0 154 42.9
AUR62030552 Chenopodium quinoa HOM05D004492 ORTHO05D005602 4.9e-19 99.0 136 40.4
Nitab4.5_0000633g0160 Nicotiana tabacum HOM05D004492 ORTHO05D005602 4.9e-19 99.0 153 41.8
Peaxi162Scf00051g00731 Petunia axillaris HOM05D004492 ORTHO05D005602 4.9e-19 99.0 153 42.5
Sc23g0000850 Simmondsia chinensis HOM05D004492 ORTHO05D005602 4.9e-19 99.0 107 46.7
TAR625G1407 Trochodendron aralioides HOM05D004492 ORTHO05D005602 6.4e-19 98.6 110 46.4
Nitab4.5_0004882g0030 Nicotiana tabacum HOM05D004492 ORTHO05D005602 8.3e-19 98.2 153 41.8
EL10Ac1g00021 Beta vulgaris HOM05D004492 ORTHO05D005602 1.4e-18 97.4 107 46.7
AUR62004708 Chenopodium quinoa HOM05D004492 ORTHO05D005602 1.4e-18 97.4 135 40.7
Migut.C01177 Erythranthe guttata HOM05D004492 ORTHO05D005602 1.4e-18 97.4 108 49.1
Medtr3g073000 Medicago truncatula HOM05D004492 ORTHO05D005602 1.4e-18 97.4 154 40.3
Ah.05g172340 Amaranthus hybridus HOM05D004492 ORTHO05D005602 1.9e-18 97.1 154 37.7
CANSAT11G0049 Cannabis sativa HOM05D004492 ORTHO05D005602 1.9e-18 97.1 152 42.8
Solyc06g060390.3 Solanum lycopersicum HOM05D004492 ORTHO05D005602 1.9e-18 97.1 153 42.5
Cpa.g.sc36.10 Carica papaya HOM05D004492 ORTHO05D005602 3.2e-18 96.3 151 41.7
RcHm_v2.0_Chr6g0294891 Rosa chinensis HOM05D004492 ORTHO05D005602 3.2e-18 96.3 146 40.4
SalBow7G0677 Salvia bowleyana HOM05D004492 ORTHO05D005602 3.2e-18 96.3 161 36.6
DCAR_002659 Daucus carota HOM05D004492 ORTHO05D005602 4.1e-18 95.9 154 39.6
Oeu047923.1 Olea europaea HOM05D004492 ORTHO05D005602 5.4e-18 95.5 152 38.2
SalBow7G1607 Salvia bowleyana HOM05D004492 ORTHO05D005602 5.4e-18 95.5 159 36.5
unitig_46.g18495 Utricularia gibba HOM05D004492 ORTHO05D005602 5.4e-18 95.5 153 43.1
Thecc.08G118700 Theobroma cacao HOM05D004492 ORTHO05D005602 7.1e-18 95.1 154 41.6
GSVIVG01008928001 Vitis vinifera HOM05D004492 ORTHO05D005602 7.1e-18 95.1 152 41.4
Atru.chr13.1338 Acer truncatum HOM05D004492 ORTHO05D005602 1.2e-17 94.4 98 51.0
Atru.chr13.1381 Acer truncatum HOM05D004492 ORTHO05D005602 1.2e-17 94.4 98 51.0
Aqoxy5G02431 Aquilegia oxysepala HOM05D004492 ORTHO05D005602 1.2e-17 94.4 109 46.8
PGR042G0918 Punica granatum HOM05D004492 ORTHO05D005602 1.2e-17 94.4 155 38.1
CiPaw.06G026300 Carya illinoinensis HOM05D004492 ORTHO05D005602 1.6e-17 94.0 154 39.0
Prupe.1G503800 Prunus persica HOM05D004492 ORTHO05D005602 1.6e-17 94.0 146 41.1
MD15G1356600 Malus domestica HOM05D004492 ORTHO05D005602 3.5e-17 92.8 152 40.8
Solyc01g034050.1 Solanum lycopersicum HOM05D004492 ORTHO05D005602 4.6e-17 92.4 108 52.8
Eucgr.G00611 Eucalyptus grandis HOM05D004492 ORTHO05D005602 6.0e-17 92.0 153 39.9
Hma1.2p1_0038F.1_g023980 Hydrangea macrophylla HOM05D004492 ORTHO05D005602 6.0e-17 92.0 150 41.3
THA.LOC104813139 Tarenaya hassleriana HOM05D004492 ORTHO05D005602 6.0e-17 92.0 106 45.3
Migut.C01176 Erythranthe guttata HOM05D004492 ORTHO05D005602 3.9e-16 89.4 108 46.3
FvH4_2g26280 Fragaria vesca HOM05D004492 ORTHO05D005602 8.6e-16 88.2 145 37.9
FAN27G1826 Fragaria x ananassa HOM05D004492 ORTHO05D005602 8.6e-16 88.2 101 48.5
Aa31LG9G14390 Aethionema arabicum HOM05D004492 ORTHO05D005602 1.5e-15 87.4 107 41.1
FAN24G0496 Fragaria x ananassa HOM05D004492 ORTHO05D005602 1.5e-15 87.4 145 37.2
VMungo1309G2182 Vigna mungo HOM05D004492 ORTHO05D005602 4.3e-15 85.9 148 40.5
Solyc05g040060.1 Solanum lycopersicum HOM05D004492 ORTHO05D005602 1.2e-14 84.3 97 50.5
Phvul.009G121500 Phaseolus vulgaris HOM05D004492 ORTHO05D005602 1.6e-14 84.0 101 48.5
AL3G50940 Arabidopsis lyrata HOM05D004492 ORTHO05D005602 4.7e-14 82.4 101 41.6
RcHm_v2.0_Chr6g0294881 Rosa chinensis HOM05D004492 ORTHO05D005602 4.7e-14 82.4 107 43.0
AT2G17900 Arabidopsis thaliana HOM05D004492 ORTHO05D005602 6.2e-14 82.0 101 41.6
Thhalv10022664m.g Eutrema salsugineum HOM05D004492 ORTHO05D005602 6.2e-14 82.0 101 41.6
FAN15G1155 Fragaria x ananassa HOM05D004492 ORTHO05D005602 1.1e-13 81.3 99 45.5
Sp3g31340 Schrenkiella parvula HOM05D004492 ORTHO05D005602 2.3e-13 80.1 103 40.8
Cc10_g10520 Coffea canephora HOM05D004492 ORTHO05D005602 4.0e-13 79.3 86 46.5
A07p03030 Brassica napus HOM05D004492 ORTHO05D005602 5.2e-13 79.0 103 42.7
BraA07t28100Z Brassica rapa HOM05D004492 ORTHO05D005602 5.2e-13 79.0 103 42.7
Carub.0003s3205 Capsella rubella HOM05D004492 ORTHO05D005602 6.8e-13 78.6 101 40.6
Mapoly0101s0047 Marchantia polymorpha HOM05D004492 ORTHO05D005602 6.8e-13 78.6 151 30.5
BcaC06g36340 Brassica carinata HOM05D004492 ORTHO05D005602 1.2e-12 77.8 101 40.6
Os01g0873800 Oryza sativa ssp. japonica HOM05D005760 ORTHO05D007113 1.2e-12 77.8 57 71.9
BcaB03g16570 Brassica carinata HOM05D004492 ORTHO05D005602 1.5e-12 77.4 140 35.7
C07p05160 Brassica napus HOM05D004492 ORTHO05D005602 1.5e-12 77.4 98 41.8
BolC7t40914H Brassica oleracea HOM05D004492 ORTHO05D005602 1.5e-12 77.4 98 41.8
FAN15G0234 Fragaria x ananassa HOM05D004492 ORTHO05D005602 7.6e-12 75.1 87 44.8
Hma1.2p1_0038F.1_g023990 Hydrangea macrophylla HOM05D004492 ORTHO05D005602 2.2e-11 73.6 74 50.0
Solyc08g016560.3 Solanum lycopersicum HOM05D004492 ORTHO05D005602 2.9e-11 73.2 66 54.5
AagrBONN_evm.TU.Sc2ySwM_344.3949 Anthoceros agrestis HOM05D004492 ORTHO05D005602 6.4e-11 72.0 150 34.7
Lj7C323T6 Lonicera japonica HOM05D004492 ORTHO05D005602 6.4e-11 72.0 114 39.5
arahy.Tifrunner.gnm1.ann1.Y35QAD Arachis hypogaea HOM05D004492 ORTHO05D005602 1.4e-10 70.9 62 51.6
SGA_v2.0_scaffold52G19008 Striga asiatica HOM05D004492 ORTHO05D005602 5.4e-10 68.9 75 44.0
Pp3c19_7630 Physcomitrium patens HOM05D004492 ORTHO05D005602 9.2e-10 68.2 155 30.3
SMO116G0295 Selaginella moellendorffii HOM05D004492 ORTHO05D005602 9.2e-10 68.2 107 33.6
COL.COLO4_38233 Corchorus olitorius HOM05D004492 ORTHO05D005602 3.5e-09 66.2 102 41.2
FvH4_2g26270 Fragaria vesca HOM05D004492 ORTHO05D005602 1.3e-08 64.3 72 45.8
FvH4_2g03781 Fragaria vesca HOM05D004492 ORTHO05D005602 2.3e-08 63.5 57 47.4
Glyma.04G252800 Glycine max HOM05D004492 ORTHO05D005602 2.3e-08 63.5 66 54.5


User provided reference genes

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