Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb002170 Zea mays HOM05D004472 ORTHO05D007169 1.0e-254 882.9 435 100.0
Os03g0128500 Oryza sativa ssp. japonica HOM05D004472 ORTHO05D007169 1.3e-233 812.8 430 91.9
Nn3g18269 Nelumbo nucifera HOM05D004472 ORTHO05D007169 6.8e-190 667.5 434 74.7
TAR623G1736 Trochodendron aralioides HOM05D004472 ORTHO05D007169 2.0e-189 666.0 429 73.9
Hma1.2p1_0386F.1_g141865 Hydrangea macrophylla HOM05D004472 ORTHO05D007169 1.8e-187 659.4 432 72.0
CsaV3_3G038830 Cucumis sativus L. HOM05D004472 ORTHO05D007169 2.4e-187 659.1 429 72.0
GSVIVG01033498001 Vitis vinifera HOM05D004472 ORTHO05D007169 3.1e-187 658.7 434 71.7
Glyma.03G144600 Glycine max HOM05D004472 ORTHO05D007169 7.0e-187 657.5 432 73.4
SGA_v2.0_scaffold69G23061 Striga asiatica HOM05D004472 ORTHO05D007169 7.0e-187 657.5 431 71.2
Glyma.19G147500 Glycine max HOM05D004472 ORTHO05D007169 1.2e-186 656.8 432 72.7
CSS0032720 Camellia sinensis var. sinensis HOM05D004472 ORTHO05D007169 2.0e-186 656.0 432 71.3
Aqoxy1G00476 Aquilegia oxysepala HOM05D004472 ORTHO05D007169 4.5e-186 654.8 427 73.3
Lj1g0006426 Lotus japonicus HOM05D004472 ORTHO05D007169 1.3e-185 653.3 434 72.6
Dinv24072 Davidia involucrata HOM05D004472 ORTHO05D007169 1.7e-185 652.9 432 71.5
Actinidia22035 Actinidia chinensis HOM05D004472 ORTHO05D007169 2.3e-185 652.5 432 71.1
Gohir.A04G055778 Gossypium hirsutum HOM05D004472 ORTHO05D007169 2.3e-185 652.5 432 72.2
CSS0031939 Camellia sinensis var. sinensis HOM05D004472 ORTHO05D007169 3.8e-185 651.7 432 70.8
Prupe.7G076900 Prunus persica HOM05D004472 ORTHO05D007169 5.0e-185 651.4 433 70.7
CiPaw.10G026500 Carya illinoinensis HOM05D004472 ORTHO05D007169 4.3e-184 648.3 431 71.5
Manes.08G044600 Manihot esculenta HOM05D004472 ORTHO05D007169 1.2e-183 646.7 434 71.2
arahy.Tifrunner.gnm1.ann1.VM941Y Arachis hypogaea HOM05D004472 ORTHO05D007169 1.6e-183 646.4 430 71.9
COL.COLO4_33983 Corchorus olitorius HOM05D004472 ORTHO05D007169 2.8e-183 645.6 429 71.8
Gorai.012G101400 Gossypium raimondii HOM05D004472 ORTHO05D007169 2.8e-183 645.6 432 71.5
MD12G1057200 Malus domestica HOM05D004472 ORTHO05D007169 8.0e-183 644.0 434 70.7
MSTRG.6484 Avicennia marina HOM05D004472 ORTHO05D007169 1.0e-182 643.7 432 69.7
Eucgr.K01838 Eucalyptus grandis HOM05D004472 ORTHO05D007169 1.0e-182 643.7 433 71.4
arahy.Tifrunner.gnm1.ann1.W50LA9 Arachis hypogaea HOM05D004472 ORTHO05D007169 1.8e-182 642.9 430 71.4
THA.LOC104824475 Tarenaya hassleriana HOM05D004472 ORTHO05D007169 1.8e-182 642.9 430 70.7
Atru.chr8.1111 Acer truncatum HOM05D004472 ORTHO05D007169 3.1e-182 642.1 430 70.9
Potri.006G192400 Populus trichocarpa HOM05D004472 ORTHO05D007169 4.0e-182 641.7 433 70.2
Cpa.g.sc85.67 Carica papaya HOM05D004472 ORTHO05D007169 5.2e-182 641.3 433 70.2
Sed0018995 Sechium edule HOM05D004472 ORTHO05D007169 6.8e-182 641.0 435 69.4
Sopen03g016030 Solanum pennellii HOM05D004472 ORTHO05D007169 6.8e-182 641.0 431 70.1
Gohir.D04G090500 Gossypium hirsutum HOM05D004472 ORTHO05D007169 8.9e-182 640.6 432 71.1
Ca_08520_v3 Cicer arietinum L. HOM05D004472 ORTHO05D007169 1.5e-181 639.8 429 71.3
Sabra16G0049800 Salix brachista HOM05D004472 ORTHO05D007169 1.3e-180 636.7 432 70.4
AT2G42120 Arabidopsis thaliana HOM05D004472 ORTHO05D007169 1.7e-180 636.3 429 69.9
QL07p023729 Quercus lobata HOM05D004472 ORTHO05D007169 1.7e-180 636.3 431 70.1
Lalb_Chr15g0079011 Lupinus albus HOM05D004472 ORTHO05D007169 2.9e-180 635.6 438 69.4
Potri.016G045800 Populus trichocarpa HOM05D004472 ORTHO05D007169 3.7e-180 635.2 431 70.5
Phvul.001G143200 Phaseolus vulgaris HOM05D004472 ORTHO05D007169 4.9e-180 634.8 432 69.9
CANSAT64G0932 Cannabis sativa HOM05D004472 ORTHO05D007169 8.3e-180 634.0 429 70.6
TPR.G18209 Trifolium pratense HOM05D004472 ORTHO05D007169 8.3e-180 634.0 429 69.9
Sabra06G0147500 Salix brachista HOM05D004472 ORTHO05D007169 1.4e-179 633.3 427 70.5
Migut.J01839 Erythranthe guttata HOM05D004472 ORTHO05D007169 3.2e-179 632.1 431 68.0
MD14G1057800 Malus domestica HOM05D004472 ORTHO05D007169 3.2e-179 632.1 429 69.7
EL10Ac3g06916 Beta vulgaris HOM05D004472 ORTHO05D007169 4.1e-179 631.7 431 68.0
ECA248G2191 Erigeron canadensis HOM05D004472 ORTHO05D007169 4.1e-179 631.7 427 69.6
TWI74G0546 Tripterygium wilfordii HOM05D004472 ORTHO05D007169 7.0e-179 630.9 434 69.1
TWI77G0336 Tripterygium wilfordii HOM05D004472 ORTHO05D007169 7.0e-179 630.9 434 69.1
Thhalv10016664m.g Eutrema salsugineum HOM05D004472 ORTHO05D007169 1.2e-178 630.2 429 69.7
Sc25g0005090 Simmondsia chinensis HOM05D004472 ORTHO05D007169 1.6e-178 629.8 448 68.3
AL4G40490 Arabidopsis lyrata HOM05D004472 ORTHO05D007169 3.5e-178 628.6 430 69.3
HanXRQChr13g0390871 Helianthus annuus HOM05D004472 ORTHO05D007169 1.3e-177 626.7 432 68.1
PSO339G4742 Papaver somniferum HOM05D004472 ORTHO05D007169 1.3e-177 626.7 430 68.8
CAN.G273.20 Capsicum annuum HOM05D004472 ORTHO05D007169 2.3e-177 625.9 434 68.7
BcaB06g29226 Brassica carinata HOM05D004472 ORTHO05D007169 3.9e-177 625.2 428 69.2
Medtr7g093210 Medicago truncatula HOM05D004472 ORTHO05D007169 6.6e-177 624.4 431 69.4
Hund19203 Selenicereus undatus HOM05D004472 ORTHO05D007169 1.9e-176 622.9 416 71.6
Phvul.001G142200 Phaseolus vulgaris HOM05D004472 ORTHO05D007169 3.3e-176 622.1 432 69.4
Rhsim03G0006000 Rhododendron simsii HOM05D004472 ORTHO05D007169 7.3e-176 620.9 411 70.8
RcHm_v2.0_Chr3g0479691 Rosa chinensis HOM05D004472 ORTHO05D007169 9.5e-176 620.5 431 68.4
PSO384G4825 Papaver somniferum HOM05D004472 ORTHO05D007169 1.6e-175 619.8 430 68.1
HPP92_018591 Vanilla planifolia HOM05D004472 ORTHO05D007169 2.1e-175 619.4 434 68.9
Oeu007762.1 Olea europaea HOM05D004472 ORTHO05D007169 2.8e-175 619.0 422 70.1
C04p69510 Brassica napus HOM05D004472 ORTHO05D007169 4.7e-175 618.2 429 68.5
Solyc03g063340.3 Solanum lycopersicum HOM05D004472 ORTHO05D007169 4.7e-175 618.2 412 70.1
A04p32010 Brassica napus HOM05D004472 ORTHO05D007169 6.2e-175 617.8 429 68.8
Sp4g24330 Schrenkiella parvula HOM05D004472 ORTHO05D007169 8.0e-175 617.5 428 68.5
PGR142G1378 Punica granatum HOM05D004472 ORTHO05D007169 3.1e-174 615.5 433 67.2
BcaC02g07263 Brassica carinata HOM05D004472 ORTHO05D007169 4.0e-174 615.1 430 68.4
Aa31LG1G24100 Aethionema arabicum HOM05D004472 ORTHO05D007169 6.8e-174 614.4 439 66.1
BraA04t18658Z Brassica rapa HOM05D004472 ORTHO05D007169 8.9e-174 614.0 429 68.1
BolC4t28450H Brassica oleracea HOM05D004472 ORTHO05D007169 1.2e-173 613.6 430 68.4
VMungo1383G3660 Vigna mungo HOM05D004472 ORTHO05D007169 1.5e-173 613.2 414 70.3
FvH4_6g22330 Fragaria vesca HOM05D004472 ORTHO05D007169 2.6e-173 612.5 429 66.9
Lj2C366G13 Lonicera japonica HOM05D004472 ORTHO05D007169 2.6e-173 612.5 413 70.7
Thecc.05G171300 Theobroma cacao HOM05D004472 ORTHO05D007169 1.7e-172 609.8 395 72.9
Carub.0004s2446 Capsella rubella HOM05D004472 ORTHO05D007169 4.9e-172 608.2 425 68.7
Lsat_1_v5_gn_5_163440 Lactuca sativa HOM05D004472 ORTHO05D007169 7.0e-171 604.4 415 67.7
FAN14G1969 Fragaria x ananassa HOM05D004472 ORTHO05D007169 3.5e-170 602.1 439 65.1
Nitab4.5_0001137g0080 Nicotiana tabacum HOM05D004472 ORTHO05D007169 3.5e-170 602.1 404 70.0
SEGI_25790 Sequoiadendron giganteum HOM05D004472 ORTHO05D007169 1.7e-169 599.7 431 65.9
Psat3g068520 Pisum sativum HOM05D004472 ORTHO05D007169 8.6e-169 597.4 417 67.4
DCAR_017009 Daucus carota HOM05D004472 ORTHO05D007169 7.3e-168 594.3 412 67.0
HPP92_006516 Vanilla planifolia HOM05D004472 ORTHO05D007169 6.2e-167 591.3 479 62.2
FAN05G5703 Fragaria x ananassa HOM05D004472 ORTHO05D007169 1.8e-166 589.7 429 66.0
CSS0048424 Camellia sinensis var. sinensis HOM05D004472 ORTHO05D007169 2.3e-166 589.3 446 65.5
CDE04G2547 Ceratophyllum demersum HOM05D004472 ORTHO05D007169 1.9e-163 579.7 386 70.5
FAN02G0232 Fragaria x ananassa HOM05D004472 ORTHO05D007169 1.9e-163 579.7 455 62.2
Nitab4.5_0007619g0020 Nicotiana tabacum HOM05D004472 ORTHO05D007169 7.1e-163 577.8 412 67.7
FAN09G4048 Fragaria x ananassa HOM05D004472 ORTHO05D007169 2.1e-162 576.2 439 64.0
Ah.13g075820 Amaranthus hybridus HOM05D004472 ORTHO05D007169 1.5e-160 570.1 400 67.0
vmacro07908 Vaccinium macrocarpon HOM05D004472 ORTHO05D007169 7.3e-160 567.8 473 60.3
ClCG10G017520 Citrullus lanatus HOM05D004472 ORTHO05D007169 1.6e-154 550.1 437 62.2
Haze_19988 Corylus avellana HOM05D004472 ORTHO05D007169 1.7e-153 546.6 488 57.6
ATR0807G137 Amborella trichopoda HOM05D004472 ORTHO05D007169 6.6e-153 544.7 375 69.6
Sed0005670 Sechium edule HOM05D004472 ORTHO05D007169 1.8e-150 536.6 358 72.3
MELO3C030998.2 Cucumis melo HOM05D004472 ORTHO05D007169 2.0e-149 533.1 537 53.1
Pp3c3_28090 Physcomitrium patens HOM05D004472 ORTHO05D007169 2.2e-148 529.6 429 57.8
PGSC0003DMG400014974 Solanum tuberosum HOM05D004472 ORTHO05D007169 4.2e-147 525.4 364 69.2
SMO111G0006 Selaginella moellendorffii HOM05D004472 ORTHO05D007169 1.2e-146 523.9 427 57.8
SalBow6G5437 Salvia bowleyana HOM05D004472 ORTHO05D007169 4.3e-144 515.4 411 60.3
Mapoly0039s0092 Marchantia polymorpha HOM05D004472 ORTHO05D007169 3.6e-143 512.3 431 57.5
AagrBONN_evm.TU.Sc2ySwM_362.678 Anthoceros agrestis HOM05D004472 ORTHO05D007169 6.2e-143 511.5 412 59.7
Haze_19990 Corylus avellana HOM05D004472 ORTHO05D007169 1.5e-141 506.9 432 59.0
Duzib128G1617 Durio zibethinus HOM05D004472 ORTHO05D007169 4.5e-141 505.4 433 58.7
Aqoxy2G02978 Aquilegia oxysepala HOM05D004472 ORTHO05D007169 9.3e-139 497.7 456 56.6
SMO339G0063 Selaginella moellendorffii HOM05D004472 ORTHO05D007169 3.9e-137 492.3 430 54.7
CBR_g38861 Chara braunii HOM05D004472 ORTHO05D000002 9.3e-131 471.1 424 53.8
AUR62015368 Chenopodium quinoa HOM05D004472 ORTHO05D007169 5.1e-129 465.3 428 54.0
CBR_g63079 Chara braunii HOM05D004472 ORTHO05D007169 1.9e-123 446.8 404 54.0
AUR62012036 Chenopodium quinoa HOM05D004472 ORTHO05D007169 5.5e-123 445.3 412 53.6
MBI06_g29494_MAGBIO Magnolia biondii HOM05D004472 ORTHO05D007169 9.4e-107 391.3 244 74.2
CARHR137180 Cardamine hirsuta HOM05D004472 ORTHO05D007169 3.0e-105 386.3 257 68.1
MCO03G010 Micromonas commoda HOM05D004472 ORTHO05D007169 3.8e-92 342.8 444 42.1
Ciclev10012551m.g Citrus clementina HOM05D004472 ORTHO05D007169 1.6e-90 337.4 235 70.2
PRCOL_00001477 Prasinoderma coloniale HOM05D004472 ORTHO05D007169 8.0e-90 335.1 369 43.9
Cre08.g374050 Chlamydomonas reinhardtii HOM05D004472 ORTHO05D007169 5.7e-88 328.9 506 37.2
SHI42174 Sapria himalayana HOM05D004472 ORTHO05D007169 6.3e-87 325.5 270 60.7
Ciclev10012767m.g Citrus clementina HOM05D004472 ORTHO05D007169 3.1e-86 323.2 199 73.4
Hma1.2p1_0386F.1_g141870 Hydrangea macrophylla HOM05D004472 ORTHO05D007169 7.0e-86 322.0 193 74.6
Peaxi162Scf00258g00730 Petunia axillaris HOM05D004472 ORTHO05D007169 2.0e-77 293.9 235 62.6
MBI06_g29491_MAGBIO Magnolia biondii HOM05D004472 ORTHO05D007169 8.9e-65 251.9 172 70.3
SHI33668 Sapria himalayana HOM05D004472 ORTHO05D007169 2.4e-54 217.2 195 60.0
SEGI_31079 Sequoiadendron giganteum HOM05D004472 ORTHO05D007169 2.1e-50 204.1 167 58.1
Haze_26548 Corylus avellana HOM05D005705 ORTHO05D007152 1.6e-45 188.0 422 30.6
Lsat_1_v5_gn_5_163500 Lactuca sativa HOM05D004472 ORTHO05D007169 3.0e-44 183.7 187 49.7
BcaNung06765 Brassica carinata HOM05D004472 ORTHO05D027254 1.3e-39 168.3 137 56.9
BcaNung04407 Brassica carinata HOM05D004472 ORTHO05D007169 8.4e-39 165.6 239 39.3
SEGI_39608 Sequoiadendron giganteum HOM05D004472 ORTHO05D007169 1.9e-38 164.5 132 59.1
Peaxi162Scf00258g00729 Petunia axillaris HOM05D004472 ORTHO05D007169 4.2e-38 163.3 95 75.8
BcaC04g21709 Brassica carinata HOM05D004472 ORTHO05D013781 6.0e-37 159.5 152 51.3
A02p27200 Brassica napus HOM05D004472 ORTHO05D013781 1.7e-36 157.9 115 58.3
BcaC03g16493 Brassica carinata HOM05D004472 ORTHO05D013781 2.5e-35 154.1 193 43.5
BcaB02g11100 Brassica carinata HOM05D004472 ORTHO05D027254 3.8e-31 140.2 141 49.6
BolC9t55720H Brassica oleracea HOM05D004472 ORTHO05D013781 4.6e-29 133.3 96 59.4
A09p46770 Brassica napus HOM05D004472 ORTHO05D013781 3.9e-28 130.2 86 61.6
BcaC01g04270 Brassica carinata HOM05D004472 ORTHO05D013781 9.0e-25 119.0 125 48.8
BcaC02g12460 Brassica carinata HOM05D004472 ORTHO05D013781 4.5e-24 116.7 130 48.5
BcaC05g24672 Brassica carinata HOM05D004472 ORTHO05D027254 2.3e-20 104.4 122 45.9
BcaNung00145 Brassica carinata HOM05D004472 ORTHO05D013781 5.1e-20 103.2 74 62.2
SEGI_06501 Sequoiadendron giganteum HOM05D004472 ORTHO05D007169 3.1e-17 94.0 96 49.0
C03p43020 Brassica napus HOM05D004472 ORTHO05D013781 6.5e-15 86.3 66 57.6
CARHR228030 Cardamine hirsuta HOM05D004472 ORTHO05D039758 6.0e-13 79.7 69 53.6
CARHR228020 Cardamine hirsuta HOM05D004472 ORTHO05D007169 1.9e-11 74.7 62 62.9
SMO364G0765 Selaginella moellendorffii HOM05D004472 ORTHO05D007169 2.8e-10 70.9 43 69.8
BcaB02g11125 Brassica carinata HOM05D004472 ORTHO05D039758 6.3e-10 69.7 65 53.8
BraA08t32859Z Brassica rapa HOM05D004472 ORTHO05D027254 7.6e-08 62.8 51 56.9
CARHR241940 Cardamine hirsuta HOM05D004472 ORTHO05D007169 2.5e-06 57.8 31 87.1
BcaB06g25539 Brassica carinata HOM05D004472 ORTHO05D094557 3.2e-06 57.4 80 40.0


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