Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb001520 Zea mays HOM05D001248 ORTHO05D445115 4.8e-111 404.4 197 100.0
Os03g0120300 Oryza sativa ssp. japonica HOM05D001248 ORTHO05D001183 5.0e-07 58.9 79 44.3
Rhsim09G0075100 Rhododendron simsii HOM05D001248 ORTHO05D001183 6.5e-07 58.5 79 44.3
Potri.010G097900 Populus trichocarpa HOM05D001248 ORTHO05D001183 1.1e-06 57.8 79 40.5
Zm00001eb403790 Zea mays HOM05D001248 ORTHO05D001183 1.1e-06 57.8 33 84.8
SMO351G0138 Selaginella moellendorffii HOM05D001248 ORTHO05D001183 1.5e-06 57.4 44 65.9
Mapoly0007s0062 Marchantia polymorpha HOM05D001248 ORTHO05D001183 1.9e-06 57.0 40 70.0
Sed0009914 Sechium edule HOM05D001248 ORTHO05D001183 1.9e-06 57.0 40 67.5
Glyma.20G010800 Glycine max HOM05D001248 ORTHO05D001183 2.5e-06 56.6 93 36.6
MBI06_g12308_MAGBIO Magnolia biondii HOM05D001248 ORTHO05D001183 2.5e-06 56.6 40 67.5
Os10g0537500 Oryza sativa ssp. japonica HOM05D001248 ORTHO05D001183 2.5e-06 56.6 40 70.0
Zm00001eb022120 Zea mays HOM05D001248 ORTHO05D001183 2.5e-06 56.6 40 70.0
Zm00001eb167970 Zea mays HOM05D001248 ORTHO05D001183 2.5e-06 56.6 40 70.0
Zm00001eb393720 Zea mays HOM05D001248 ORTHO05D001183 2.5e-06 56.6 40 70.0
Pp3c1_42740 Physcomitrium patens HOM05D001248 ORTHO05D001183 3.2e-06 56.2 40 67.5
DCAR_002630 Daucus carota HOM05D001248 ORTHO05D001183 4.2e-06 55.8 40 67.5
Lj2g0026430 Lotus japonicus HOM05D001248 ORTHO05D001183 4.2e-06 55.8 79 41.8
Pp3c2_8490 Physcomitrium patens HOM05D001248 ORTHO05D001183 4.2e-06 55.8 40 67.5
SMO119G0384 Selaginella moellendorffii HOM05D001248 ORTHO05D001183 4.2e-06 55.8 68 48.5
Zm00001eb250780 Zea mays HOM05D001248 ORTHO05D001183 4.2e-06 55.8 40 67.5
ATR0618G238 Amborella trichopoda HOM05D001248 ORTHO05D001183 5.5e-06 55.5 40 65.0
TAR177G0001 Trochodendron aralioides HOM05D001248 ORTHO05D001183 5.5e-06 55.5 79 40.5
Lalb_Chr12g0209241 Lupinus albus HOM05D001248 ORTHO05D001183 7.2e-06 55.1 33 75.8
Pp3c1_42710 Physcomitrium patens HOM05D001248 ORTHO05D001183 7.2e-06 55.1 40 67.5
SalBow2G1881 Salvia bowleyana HOM05D001248 ORTHO05D001183 7.2e-06 55.1 41 65.9
EL10Ac9g21482 Beta vulgaris HOM05D001248 ORTHO05D001183 9.4e-06 54.7 68 42.6
Cpa.g.sc198.34 Carica papaya HOM05D001248 ORTHO05D001183 9.4e-06 54.7 39 66.7
Dinv28158 Davidia involucrata HOM05D001248 ORTHO05D001183 9.4e-06 54.7 79 40.5
Manes.10G068000 Manihot esculenta HOM05D001248 ORTHO05D001183 9.4e-06 54.7 33 78.8
Hund04376 Selenicereus undatus HOM05D001248 ORTHO05D001183 9.4e-06 54.7 66 47.0
Sc03g0008700 Simmondsia chinensis HOM05D001248 ORTHO05D001183 9.4e-06 54.7 36 72.2
Zm00001eb054750 Zea mays HOM05D001248 ORTHO05D001876 9.4e-06 54.7 40 67.5


User provided reference genes

Program Settings