Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb001500 Zea mays HOM05D006811 ORTHO05D008419 3.3e-178 628.2 319 100.0
Aqoxy3G04154 Aquilegia oxysepala HOM05D006811 ORTHO05D008419 1.7e-89 333.6 277 58.5
TAR622G1242 Trochodendron aralioides HOM05D006811 ORTHO05D008419 7.9e-87 324.7 258 60.9
DCAR_020444 Daucus carota HOM05D006811 ORTHO05D008419 6.7e-86 321.6 261 60.5
GSVIVG01035212001 Vitis vinifera HOM05D006811 ORTHO05D008419 8.7e-86 321.2 270 57.8
Rhsim10G0185300 Rhododendron simsii HOM05D006811 ORTHO05D008419 1.5e-85 320.5 280 58.2
Nn4g24731 Nelumbo nucifera HOM05D006811 ORTHO05D008419 5.7e-85 318.5 270 57.4
Actinidia40414 Actinidia chinensis HOM05D006811 ORTHO05D008419 9.7e-85 317.8 274 58.0
Migut.K00747 Erythranthe guttata HOM05D006811 ORTHO05D008419 9.7e-85 317.8 259 59.1
Hma1.2p1_0158F.1_g069620 Hydrangea macrophylla HOM05D006811 ORTHO05D008419 9.7e-85 317.8 310 54.8
Dinv28246 Davidia involucrata HOM05D006811 ORTHO05D008419 1.3e-84 317.4 283 56.9
CsaV3_4G000630 Cucumis sativus L. HOM05D006811 ORTHO05D008419 1.6e-84 317.0 269 58.0
Lalb_Chr15g0085211 Lupinus albus HOM05D006811 ORTHO05D008419 2.2e-84 316.6 269 58.4
CSS0033706 Camellia sinensis var. sinensis HOM05D006811 ORTHO05D008419 2.8e-84 316.2 262 59.2
ClCG10G010680 Citrullus lanatus HOM05D006811 ORTHO05D008419 3.1e-83 312.8 269 57.6
Ca_17071_v3 Cicer arietinum L. HOM05D006811 ORTHO05D008419 6.9e-83 311.6 293 53.2
PSO063G4300 Papaver somniferum HOM05D006811 ORTHO05D008419 2.6e-82 309.7 275 55.6
Peaxi162Scf00713g00019 Petunia axillaris HOM05D006811 ORTHO05D008419 2.6e-82 309.7 277 58.8
Glyma.11G212500 Glycine max HOM05D006811 ORTHO05D008419 3.4e-82 309.3 271 57.2
PGSC0003DMG400016719 Solanum tuberosum HOM05D006811 ORTHO05D008419 4.5e-82 308.9 272 57.7
Sabra17G0117500 Salix brachista HOM05D006811 ORTHO05D008419 5.9e-82 308.5 271 56.5
CANSAT54G1721 Cannabis sativa HOM05D006811 ORTHO05D008419 1.3e-81 307.4 293 53.6
Glyma.18G043800 Glycine max HOM05D006811 ORTHO05D008419 1.7e-81 307.0 297 53.9
HanXRQChr14g0443391 Helianthus annuus HOM05D006811 ORTHO05D008419 2.9e-81 306.2 254 58.3
AT1G65900 Arabidopsis thaliana HOM05D006811 ORTHO05D008419 5.0e-81 305.4 280 56.8
MSTRG.15636 Avicennia marina HOM05D006811 ORTHO05D008419 5.0e-81 305.4 273 55.3
THA.LOC104825578 Tarenaya hassleriana HOM05D006811 ORTHO05D008419 5.0e-81 305.4 321 49.8
CARHR057790 Cardamine hirsuta HOM05D006811 ORTHO05D008419 8.5e-81 304.7 276 56.5
Cc07_g12750 Coffea canephora HOM05D006811 ORTHO05D008419 1.4e-80 303.9 274 56.6
RcHm_v2.0_Chr3g0488721 Rosa chinensis HOM05D006811 ORTHO05D008419 1.4e-80 303.9 278 55.0
Lj6g0026577 Lotus japonicus HOM05D006811 ORTHO05D008419 1.9e-80 303.5 299 52.5
Sp5g20950 Schrenkiella parvula HOM05D006811 ORTHO05D008419 1.9e-80 303.5 280 56.8
Sopen02g025910 Solanum pennellii HOM05D006811 ORTHO05D008419 1.9e-80 303.5 261 58.2
TPR.G26689 Trifolium pratense HOM05D006811 ORTHO05D008419 1.9e-80 303.5 298 52.7
Medtr3g064600 Medicago truncatula HOM05D006811 ORTHO05D008419 2.5e-80 303.1 302 52.3
Potri.017G139400 Populus trichocarpa HOM05D006811 ORTHO05D008419 2.5e-80 303.1 277 54.9
Aa31LG2G2700 Aethionema arabicum HOM05D006811 ORTHO05D008419 3.2e-80 302.8 267 56.9
Cfa007746 Carpinus fangiana HOM05D006811 ORTHO05D008419 4.2e-80 302.4 259 58.3
AL2G23270 Arabidopsis lyrata HOM05D006811 ORTHO05D008419 5.5e-80 302.0 282 56.0
MD17G1286700 Malus domestica HOM05D006811 ORTHO05D008419 5.5e-80 302.0 261 58.2
CDE05G3344 Ceratophyllum demersum HOM05D006811 ORTHO05D008419 7.2e-80 301.6 281 54.4
Carub.0002s1184 Capsella rubella HOM05D006811 ORTHO05D008419 9.4e-80 301.2 282 55.0
Thhalv10018647m.g Eutrema salsugineum HOM05D006811 ORTHO05D008419 1.6e-79 300.4 280 56.4
Gohir.A12G052300 Gossypium hirsutum HOM05D006811 ORTHO05D008419 1.6e-79 300.4 285 55.4
Gorai.008G054100 Gossypium raimondii HOM05D006811 ORTHO05D008419 2.7e-79 299.7 285 55.4
VMungo0540G2025 Vigna mungo HOM05D006811 ORTHO05D008419 3.6e-79 299.3 271 55.4
SalBow5G0387 Salvia bowleyana HOM05D006811 ORTHO05D008419 1.8e-78 297.0 275 54.9
SalBow5G5201 Salvia bowleyana HOM05D006811 ORTHO05D008419 1.8e-78 297.0 275 54.9
Thecc.04G060000 Theobroma cacao HOM05D006811 ORTHO05D008419 1.8e-78 297.0 283 54.1
FAN23G2849 Fragaria x ananassa HOM05D006811 ORTHO05D008419 2.3e-78 296.6 294 52.4
Hund22201 Selenicereus undatus HOM05D006811 ORTHO05D008419 8.8e-78 294.7 278 52.9
Lsat_1_v5_gn_2_71780 Lactuca sativa HOM05D006811 ORTHO05D008419 1.1e-77 294.3 267 53.6
arahy.Tifrunner.gnm1.ann1.A3RENN Arachis hypogaea HOM05D006811 ORTHO05D008419 2.5e-77 293.1 274 54.7
Psat5g142440 Pisum sativum HOM05D006811 ORTHO05D008419 3.3e-77 292.7 274 54.0
ATR0807G007 Amborella trichopoda HOM05D006811 ORTHO05D008419 4.3e-77 292.4 249 57.4
Eucgr.F02911 Eucalyptus grandis HOM05D006811 ORTHO05D008419 9.7e-77 291.2 255 55.3
FvH4_1g27290 Fragaria vesca HOM05D006811 ORTHO05D008419 1.7e-76 290.4 282 53.5
Nitab4.5_0000483g0290 Nicotiana tabacum HOM05D006811 ORTHO05D008419 2.8e-76 289.7 274 55.1
Sc06g0003070 Simmondsia chinensis HOM05D006811 ORTHO05D008419 6.9e-75 285.0 276 52.2
CiPaw.03G075800 Carya illinoinensis HOM05D006811 ORTHO05D008419 9.1e-75 284.6 263 55.1
BcaB03g15309 Brassica carinata HOM05D006811 ORTHO05D008419 2.0e-74 283.5 268 54.9
C06p39240 Brassica napus HOM05D006811 ORTHO05D008419 5.9e-74 282.0 274 54.4
A07p33010 Brassica napus HOM05D006811 ORTHO05D008419 1.0e-73 281.2 278 54.0
BraA07t30929Z Brassica rapa HOM05D006811 ORTHO05D008419 1.0e-73 281.2 278 54.0
BcaC08g46096 Brassica carinata HOM05D006811 ORTHO05D008419 2.2e-73 280.0 268 54.9
Haze_14327 Corylus avellana HOM05D006811 ORTHO05D008419 5.0e-73 278.9 261 55.2
EL10Ac4g08932 Beta vulgaris HOM05D006811 ORTHO05D008419 4.2e-72 275.8 256 50.8
PGR004G2199 Punica granatum HOM05D006811 ORTHO05D008419 1.4e-70 270.8 277 52.0
BolC6t39018H Brassica oleracea HOM05D006811 ORTHO05D008419 1.1e-69 267.7 311 47.9
Nitab4.5_0008137g0060 Nicotiana tabacum HOM05D006811 ORTHO05D008419 4.4e-69 265.8 309 48.2
MELO3C017973.2 Cucumis melo HOM05D006811 ORTHO05D008419 1.7e-68 263.8 232 56.0
Gohir.D12G050800 Gossypium hirsutum HOM05D006811 ORTHO05D008419 6.3e-68 261.9 250 55.6
HanXRQChr12g0365711 Helianthus annuus HOM05D006811 ORTHO05D008419 1.1e-67 261.2 268 49.6
vmacro20465 Vaccinium macrocarpon HOM05D006811 ORTHO05D008419 1.6e-66 257.3 262 53.8
Ciclev10013413m.g Citrus clementina HOM05D006811 ORTHO05D008419 2.6e-66 256.5 248 52.0
unitig_0.g2638 Utricularia gibba HOM05D006811 ORTHO05D008419 1.1e-64 251.1 256 48.4
Cpa.g.sc178.33 Carica papaya HOM05D006811 ORTHO05D008419 1.5e-64 250.8 274 49.6
TWI53G0648 Tripterygium wilfordii HOM05D006811 ORTHO05D008419 8.0e-63 245.0 213 54.5
HPP92_014601 Vanilla planifolia HOM05D006811 ORTHO05D008419 2.8e-60 236.5 221 55.2
Lj4A251G58 Lonicera japonica HOM05D006811 ORTHO05D008419 6.3e-60 235.3 297 44.1
FAN26G0959 Fragaria x ananassa HOM05D006811 ORTHO05D008419 8.2e-60 235.0 279 45.9
Duzib138G1484 Durio zibethinus HOM05D006811 ORTHO05D008419 1.0e-57 228.0 279 44.8
AUR62003402 Chenopodium quinoa HOM05D006811 ORTHO05D008419 1.1e-56 224.6 298 42.6
Manes.02G081300 Manihot esculenta HOM05D006811 ORTHO05D008419 1.5e-56 224.2 192 54.7
AUR62004775 Chenopodium quinoa HOM05D006811 ORTHO05D008419 2.5e-56 223.4 274 43.8
ECA238G0794 Erigeron canadensis HOM05D006811 ORTHO05D008419 1.2e-53 214.5 254 44.9
QL02p064229 Quercus lobata HOM05D006811 ORTHO05D008419 1.5e-53 214.2 339 38.9
FAN28G2567 Fragaria x ananassa HOM05D006811 ORTHO05D008419 9.8e-53 211.5 176 55.7
Phvul.006G087200 Phaseolus vulgaris HOM05D006811 ORTHO05D008419 4.5e-50 202.6 190 51.1
Atru.chr1.2130 Acer truncatum HOM05D006811 ORTHO05D008419 1.5e-48 197.6 168 53.0
Prupe.3G014300 Prunus persica HOM05D006811 ORTHO05D008419 4.2e-48 196.1 204 48.5
Sed0027023 Sechium edule HOM05D006811 ORTHO05D008419 4.2e-48 196.1 178 49.4
SGA_v2.0_scaffold115G32048 Striga asiatica HOM05D006811 ORTHO05D008419 1.2e-47 194.5 165 53.3
arahy.Tifrunner.gnm1.ann1.JYBV0C Arachis hypogaea HOM05D006811 ORTHO05D008419 3.4e-45 186.4 174 56.3
HPP92_014605 Vanilla planifolia HOM05D006811 ORTHO05D008419 5.7e-45 185.7 153 58.8
DCAR_017976 Daucus carota HOM05D006811 ORTHO05D008419 7.7e-42 175.3 160 52.5
Ah.06g191630 Amaranthus hybridus HOM05D006811 ORTHO05D008419 2.3e-41 173.7 170 52.4
FAN19G2462 Fragaria x ananassa HOM05D006811 ORTHO05D008419 8.3e-36 155.2 162 48.1
CSS0043986 Camellia sinensis var. sinensis HOM05D006811 ORTHO05D008419 3.5e-34 149.8 145 50.3
AagrBONN_evm.TU.Sc2ySwM_368.3231 Anthoceros agrestis HOM05D006811 ORTHO05D008419 2.5e-32 143.7 249 36.1
Os03g0120000 Oryza sativa ssp. japonica HOM05D006811 ORTHO05D008419 3.6e-31 139.8 116 67.2
CBR_g31433 Chara braunii HOM05D006811 ORTHO05D008419 1.8e-22 110.9 290 31.4
FAN28G1678 Fragaria x ananassa HOM05D006811 ORTHO05D008419 2.2e-20 104.0 105 54.3
Medtr3g073800 Medicago truncatula HOM05D006811 ORTHO05D008419 7.8e-18 95.5 94 53.2
Aa31LG2G2690 Aethionema arabicum HOM05D000356 ORTHO05D000265 5.6e-16 89.4 76 53.9
PSO782G1785 Papaver somniferum HOM05D006811 ORTHO05D008419 8.1e-15 85.5 78 50.0
FAN28G2576 Fragaria x ananassa HOM05D006811 ORTHO05D008419 4.0e-14 83.2 94 42.6
MCO05G199 Micromonas commoda HOM05D006811 ORTHO05D008419 7.8e-10 68.9 253 27.7
PRCOL_00005605 Prasinoderma coloniale HOM05D006811 ORTHO05D008419 6.6e-09 65.9 251 25.5
Cre02.g081050 Chlamydomonas reinhardtii HOM05D006811 ORTHO05D008419 1.1e-08 65.1 250 24.8
COL.COLO4_03698 Corchorus olitorius HOM05D006811 ORTHO05D008419 1.1e-08 65.1 68 42.6
SEGI_23786 Sequoiadendron giganteum HOM05D006811 ORTHO05D008419 2.5e-08 63.9 105 34.3
Oeu032292.1 Olea europaea HOM05D006811 ORTHO05D008419 4.7e-07 59.7 44 68.2
PRCOL_00004838 Prasinoderma coloniale HOM05D006811 ORTHO05D008419 3.1e-06 57.0 254 22.4


User provided reference genes

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