Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
VMungo1383G3403 Vigna mungo HOM05D007752 ORTHO05D009994 1.2e-148 530.8 515 100.0
Phvul.008G082800 Phaseolus vulgaris HOM05D007752 ORTHO05D009994 8.8e-104 381.7 515 84.9
Glyma.09G274800 Glycine max HOM05D007752 ORTHO05D009994 8.6e-75 285.4 422 75.1
Lj1g0026088 Lotus japonicus HOM05D007752 ORTHO05D009994 7.1e-61 239.2 516 64.5
Medtr7g073260 Medicago truncatula HOM05D007752 ORTHO05D009994 2.1e-41 174.5 501 60.7
VMungo0720G0765 Vigna mungo HOM05D007752 ORTHO05D009994 1.9e-37 161.4 389 42.4
TPR.G14113 Trifolium pratense HOM05D007752 ORTHO05D009994 1.0e-35 155.6 509 57.8
Psat3g118880 Pisum sativum HOM05D007752 ORTHO05D009994 5.1e-35 153.3 181 53.0
VMungo0251G1651 Vigna mungo HOM05D007752 ORTHO05D009994 8.1e-33 146.0 380 32.1
CSS0006720 Camellia sinensis var. sinensis HOM05D007752 ORTHO05D009994 3.2e-29 134.0 439 58.5
Ca_07763_v3 Cicer arietinum L. HOM05D007752 ORTHO05D009994 2.5e-26 124.4 390 61.0
COL.COLO4_06481 Corchorus olitorius HOM05D007752 ORTHO05D000248 9.0e-24 115.9 366 64.8
Potri.016G136700 Populus trichocarpa HOM05D007752 ORTHO05D009994 4.5e-23 113.6 446 63.2
CSS0000350 Camellia sinensis var. sinensis HOM05D007752 ORTHO05D009994 3.8e-22 110.5 439 56.7
CiPaw.10G164800 Carya illinoinensis HOM05D007752 ORTHO05D009994 9.3e-21 105.9 435 54.0
Prupe.6G293600 Prunus persica HOM05D007752 ORTHO05D009994 1.0e-19 102.4 158 39.2
FvH4_6g09870 Fragaria vesca HOM05D007752 ORTHO05D009994 2.5e-18 97.8 110 44.5
QL07p032115 Quercus lobata HOM05D007752 ORTHO05D009994 2.5e-18 97.8 198 37.9
RcHm_v2.0_Chr3g0460471 Rosa chinensis HOM05D007752 ORTHO05D009994 2.5e-18 97.8 110 47.3
MD04G1174700 Malus domestica HOM05D007752 ORTHO05D009994 5.7e-18 96.7 468 63.2
FAN09G1066 Fragaria x ananassa HOM05D007752 ORTHO05D009994 7.4e-18 96.3 110 43.6
FAN02G1651 Fragaria x ananassa HOM05D007752 ORTHO05D009994 1.3e-17 95.5 110 43.6
FAN14G1029 Fragaria x ananassa HOM05D007752 ORTHO05D009994 1.3e-17 95.5 110 43.6
Haze_21175 Corylus avellana HOM05D007752 ORTHO05D009994 6.3e-17 93.2 157 38.2
ClCG10G022730 Citrullus lanatus HOM05D007752 ORTHO05D009994 1.4e-16 92.0 174 42.0
Sc20g0006950 Simmondsia chinensis HOM05D007752 ORTHO05D009994 1.8e-16 91.7 173 30.6
Hma1.2p1_0174F.1_g076820 Hydrangea macrophylla HOM05D007752 ORTHO05D009994 6.9e-16 89.7 112 39.3
Sabra04G0153400 Salix brachista HOM05D007752 ORTHO05D009994 2.6e-15 87.8 446 54.7
Thecc.04G151600 Theobroma cacao HOM05D007752 ORTHO05D009994 2.6e-15 87.8 361 64.8
Duzib151G0981 Durio zibethinus HOM05D007752 ORTHO05D009994 5.8e-15 86.7 146 34.9
Eucgr.A00738 Eucalyptus grandis HOM05D007752 ORTHO05D009994 5.8e-15 86.7 168 31.0
PSO170G5102 Papaver somniferum HOM05D007752 ORTHO05D009994 1.3e-14 85.5 173 30.6
Lj3P941T40 Lonicera japonica HOM05D007752 ORTHO05D009994 2.2e-14 84.7 162 28.4
PSO017G1004 Papaver somniferum HOM05D007752 ORTHO05D009994 2.2e-14 84.7 172 30.8
Rhsim04G0121800 Rhododendron simsii HOM05D007752 ORTHO05D009994 3.8e-14 84.0 124 40.3
AUR62029765 Chenopodium quinoa HOM05D007752 ORTHO05D009994 1.9e-13 81.6 122 36.9
Dinv16979 Davidia involucrata HOM05D007752 ORTHO05D009994 1.9e-13 81.6 104 42.3
AUR62006417 Chenopodium quinoa HOM05D007752 ORTHO05D000248 5.5e-13 80.1 118 37.3
Cfa017034 Carpinus fangiana HOM05D007752 ORTHO05D009994 7.2e-13 79.7 84 46.4
MELO3C009103.2 Cucumis melo HOM05D007752 ORTHO05D009994 9.3e-13 79.3 93 35.5
CANSAT35G0798 Cannabis sativa HOM05D007752 ORTHO05D009994 1.3e-11 75.5 168 31.0
TWI77G0759 Tripterygium wilfordii HOM05D007752 ORTHO05D009994 1.8e-11 75.1 76 44.7
Aqoxy4G02425 Aquilegia oxysepala HOM05D007752 ORTHO05D009994 5.1e-11 73.6 96 42.7
Cpa.g.sc86.57 Carica papaya HOM05D007752 ORTHO05D009994 8.7e-11 72.8 91 38.5
Gohir.A02G003300 Gossypium hirsutum HOM05D007752 ORTHO05D009994 4.3e-10 70.5 128 32.8
Gorai.005G004200 Gossypium raimondii HOM05D007752 ORTHO05D009994 4.3e-10 70.5 156 44.2
Migut.J00038 Erythranthe guttata HOM05D007752 ORTHO05D009994 5.7e-10 70.1 102 39.2
SalBow8G2716 Salvia bowleyana HOM05D007752 ORTHO05D009994 7.4e-10 69.7 166 28.3
Nn2g10299 Nelumbo nucifera HOM05D007752 ORTHO05D009994 9.7e-10 69.3 90 36.7
EL10Ac7g17101 Beta vulgaris HOM05D007752 ORTHO05D000248 1.3e-09 68.9 94 34.0
Sed0005875 Sechium edule HOM05D007752 ORTHO05D009994 1.6e-09 68.6 158 25.3
Oeu057981.1 Olea europaea HOM05D007752 ORTHO05D009994 4.8e-09 67.0 83 39.8
PGR031G1793 Punica granatum HOM05D007752 ORTHO05D009994 6.3e-09 66.6 109 41.3
Ah.08g209310 Amaranthus hybridus HOM05D007752 ORTHO05D009994 8.2e-09 66.2 165 30.9
Actinidia29032 Actinidia chinensis HOM05D007752 ORTHO05D009994 1.1e-08 65.9 138 28.3
Peaxi162Scf00141g00093 Petunia axillaris HOM05D007752 ORTHO05D009994 3.1e-08 64.3 67 46.3
Ciclev10013314m.g Citrus clementina HOM05D007752 ORTHO05D009994 4.1e-08 63.9 110 31.8
Nitab4.5_0004433g0030 Nicotiana tabacum HOM05D007752 ORTHO05D009994 1.5e-07 62.0 154 28.6
TAR633G0335 Trochodendron aralioides HOM05D007752 ORTHO05D009994 4.5e-07 60.5 141 27.0
Lsat_1_v5_gn_5_152320 Lactuca sativa HOM05D007752 ORTHO05D009994 5.9e-07 60.1 74 35.1
CDE04G1037 Ceratophyllum demersum HOM05D007752 ORTHO05D009994 7.7e-07 59.7 84 38.1
HanXRQChr01g0000111 Helianthus annuus HOM05D007752 ORTHO05D009994 7.7e-07 59.7 58 48.3
Zm00001eb016080 Zea mays HOM05D007752 ORTHO05D009994 7.7e-07 59.7 93 40.9
MBI03_g22789_MAGBIO Magnolia biondii HOM05D007752 ORTHO05D009994 1.7e-06 58.5 105 33.3
Manes.08G171200 Manihot esculenta HOM05D007752 ORTHO05D009994 1.7e-06 58.5 52 50.0
Peaxi162Scf00732g00031 Petunia axillaris HOM05D007752 ORTHO05D000248 3.8e-06 57.4 105 37.1
Solyc09g042250.2 Solanum lycopersicum HOM05D007752 ORTHO05D009994 3.8e-06 57.4 57 45.6
HPP92_024978 Vanilla planifolia HOM05D007752 ORTHO05D009994 5.0e-06 57.0 96 35.4
PGSC0003DMG400038126 Solanum tuberosum HOM05D007752 ORTHO05D009994 8.5e-06 56.2 57 45.6


User provided reference genes

Program Settings