Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
VMungo1383G3325 Vigna mungo HOM05D007427 ORTHO05D006413 7.1e-25 117.5 118 100.0
Phvul.001G168900 Phaseolus vulgaris HOM05D007427 ORTHO05D006413 6.2e-21 104.4 59 91.5
Glyma.03G170900 Glycine max HOM05D007427 ORTHO05D006413 7.6e-19 97.4 61 85.2
Glyma.19G171900 Glycine max HOM05D007427 ORTHO05D006413 2.1e-16 89.4 61 80.3
Glyma.03G170800 Glycine max HOM05D007427 ORTHO05D006413 1.8e-15 86.3 61 78.7
Lj1g0018605 Lotus japonicus HOM05D007427 ORTHO05D006413 3.9e-15 85.1 60 75.0
Lalb_Chr25g0289621 Lupinus albus HOM05D007427 ORTHO05D006413 5.1e-15 84.7 54 75.9
Lalb_Chr01g0019331 Lupinus albus HOM05D007427 ORTHO05D006413 6.7e-15 84.3 56 73.2
Medtr7g099670 Medicago truncatula HOM05D007427 ORTHO05D006413 2.5e-14 82.4 61 77.0
arahy.Tifrunner.gnm1.ann1.KG3A2Z Arachis hypogaea HOM05D007427 ORTHO05D006413 3.3e-14 82.0 63 65.1
Ca_08774_v3 Cicer arietinum L. HOM05D007427 ORTHO05D006413 4.3e-14 81.6 58 65.5
Glyma.19G171800 Glycine max HOM05D007427 ORTHO05D006413 4.0e-12 75.1 61 68.9
QL09p044390 Quercus lobata HOM05D007427 ORTHO05D006413 9.0e-12 73.9 55 63.6
Duzib138G0914 Durio zibethinus HOM05D007427 ORTHO05D006413 2.0e-11 72.8 56 67.9
Glyma.10G043100 Glycine max HOM05D007427 ORTHO05D006413 2.0e-11 72.8 59 64.4
CiPaw.04G107800 Carya illinoinensis HOM05D007427 ORTHO05D006413 7.6e-11 70.9 58 67.2
Psat3g049800 Pisum sativum HOM05D007427 ORTHO05D006413 7.6e-11 70.9 62 64.5
QL09p044388 Quercus lobata HOM05D007427 ORTHO05D006413 7.6e-11 70.9 54 61.1
Duzib211G0080 Durio zibethinus HOM05D007427 ORTHO05D006413 1.7e-10 69.7 59 67.8
Lj1g0008336 Lotus japonicus HOM05D007427 ORTHO05D006413 1.7e-10 69.7 61 62.3
Thecc.01G231600 Theobroma cacao HOM05D007427 ORTHO05D006413 2.9e-10 68.9 58 60.3
Ciclev10022672m.g Citrus clementina HOM05D007427 ORTHO05D006413 3.8e-10 68.6 78 56.4
Rhsim13G0042300 Rhododendron simsii HOM05D007427 ORTHO05D006413 6.4e-10 67.8 61 59.0
CANSAT01G2272 Cannabis sativa HOM05D007427 ORTHO05D006413 1.1e-09 67.0 64 62.5
Haze_24760 Corylus avellana HOM05D007427 ORTHO05D006413 2.4e-09 65.9 59 59.3
Prupe.8G208000 Prunus persica HOM05D007427 ORTHO05D006413 2.4e-09 65.9 61 70.5
Thecc.01G231700 Theobroma cacao HOM05D007427 ORTHO05D006413 2.4e-09 65.9 67 55.2
Actinidia23744 Actinidia chinensis HOM05D007427 ORTHO05D006413 3.2e-09 65.5 55 58.2
CiPaw.03G152700 Carya illinoinensis HOM05D007427 ORTHO05D006413 3.2e-09 65.5 54 61.1
CsaV3_7G025650 Cucumis sativus L. HOM05D007427 ORTHO05D006413 3.2e-09 65.5 60 60.0
Gohir.A07G154400 Gossypium hirsutum HOM05D007427 ORTHO05D006413 4.2e-09 65.1 60 61.7
Gohir.D07G160800 Gossypium hirsutum HOM05D007427 ORTHO05D006413 4.2e-09 65.1 60 61.7
Gorai.001G183700 Gossypium raimondii HOM05D007427 ORTHO05D006413 4.2e-09 65.1 60 61.7
Medtr1g069085 Medicago truncatula HOM05D007427 ORTHO05D006413 4.2e-09 65.1 60 65.0
RcHm_v2.0_Chr6g0285411 Rosa chinensis HOM05D007427 ORTHO05D006413 4.2e-09 65.1 64 60.9
Sabra02G0191700 Salix brachista HOM05D007427 ORTHO05D006413 4.2e-09 65.1 69 52.2
Carub.0007s1161 Capsella rubella HOM05D008344 ORTHO05D006413 7.1e-09 64.3 54 61.1
Cpa.g.sc8.193 Carica papaya HOM05D007427 ORTHO05D006413 7.1e-09 64.3 52 67.3
COL.COLO4_17317 Corchorus olitorius HOM05D007427 ORTHO05D006413 9.3e-09 63.9 59 64.4
COL.COLO4_28358 Corchorus olitorius HOM05D007427 ORTHO05D006413 9.3e-09 63.9 63 54.0
MELO3C024163.2 Cucumis melo HOM05D007427 ORTHO05D006413 9.3e-09 63.9 60 58.3
Nitab4.5_0001740g0060 Nicotiana tabacum HOM05D007427 ORTHO05D006413 9.3e-09 63.9 63 57.1
FvH4_2g19680 Fragaria vesca HOM05D007427 ORTHO05D006413 1.2e-08 63.5 65 60.0
FAN24G2151 Fragaria x ananassa HOM05D007427 ORTHO05D006413 1.2e-08 63.5 65 60.0
MD05G1181500 Malus domestica HOM05D007427 ORTHO05D006413 1.2e-08 63.5 63 65.1
CSS0036288 Camellia sinensis var. sinensis HOM05D007427 ORTHO05D006413 1.6e-08 63.2 61 65.6
FAN15G2923 Fragaria x ananassa HOM05D007427 ORTHO05D006413 1.6e-08 63.2 65 58.5
FAN27G1788 Fragaria x ananassa HOM05D007427 ORTHO05D006413 1.6e-08 63.2 65 58.5
Ciclev10022773m.g Citrus clementina HOM05D007427 ORTHO05D006413 2.1e-08 62.8 73 52.1
Glyma.13G130600 Glycine max HOM05D007427 ORTHO05D006413 2.1e-08 62.8 52 67.3
Psat6g064560 Pisum sativum HOM05D007427 ORTHO05D006413 2.1e-08 62.8 60 58.3
Sed0020523 Sechium edule HOM05D007427 ORTHO05D006413 2.1e-08 62.8 60 56.7
ClCG09G009340 Citrullus lanatus HOM05D007427 ORTHO05D006413 2.7e-08 62.4 57 57.9
MELO3C012793.2 Cucumis melo HOM05D007427 ORTHO05D006413 2.7e-08 62.4 55 60.0
Phvul.007G156700 Phaseolus vulgaris HOM05D007427 ORTHO05D006413 2.7e-08 62.4 59 62.7
Potri.002G252400 Populus trichocarpa HOM05D007427 ORTHO05D006413 3.5e-08 62.0 64 53.1
SGA_v2.0_scaffold42G16152 Striga asiatica HOM05D007427 ORTHO05D006413 3.5e-08 62.0 59 57.6
CSS0029156 Camellia sinensis var. sinensis HOM05D007427 ORTHO05D006413 4.6e-08 61.6 61 63.9
Hma1.2p1_1858F.1_g305540 Hydrangea macrophylla HOM05D007427 ORTHO05D006413 4.6e-08 61.6 54 57.4
SGA_v2.0_scaffold8G04664 Striga asiatica HOM05D007427 ORTHO05D006413 7.9e-08 60.8 60 53.3
AL7G23430 Arabidopsis lyrata HOM05D008344 ORTHO05D006413 1.0e-07 60.5 54 63.0
CiPaw.04G107700 Carya illinoinensis HOM05D007427 ORTHO05D006413 1.0e-07 60.5 59 61.0
SGA_v2.0_scaffold1G00704 Striga asiatica HOM05D007427 ORTHO05D006413 2.3e-07 59.3 56 57.1
BcaNung00447 Brassica carinata HOM05D008344 ORTHO05D006413 3.0e-07 58.9 54 63.0
CANSAT01G2831 Cannabis sativa HOM05D007427 ORTHO05D006413 3.0e-07 58.9 50 58.0
Cc01_g17390 Coffea canephora HOM05D007427 ORTHO05D006413 3.0e-07 58.9 55 60.0
Dinv19234 Davidia involucrata HOM05D007427 ORTHO05D006413 3.0e-07 58.9 54 53.7
Thhalv10026613m.g Eutrema salsugineum HOM05D008344 ORTHO05D006413 3.0e-07 58.9 54 63.0
Gohir.A07G154300 Gossypium hirsutum HOM05D007427 ORTHO05D006413 3.9e-07 58.5 71 47.9
Gohir.D07G160600 Gossypium hirsutum HOM05D007427 ORTHO05D006413 3.9e-07 58.5 71 47.9
ClCG09G009270 Citrullus lanatus HOM05D007427 ORTHO05D006413 5.1e-07 58.2 59 59.3
CsaV3_3G039490 Cucumis sativus L. HOM05D007427 ORTHO05D006413 5.1e-07 58.2 48 62.5
DCAR_004704 Daucus carota HOM05D007427 ORTHO05D006413 5.1e-07 58.2 65 55.4
Gohir.D08G211500 Gossypium hirsutum HOM05D007427 ORTHO05D006413 5.1e-07 58.2 66 48.5
Gorai.004G224800 Gossypium raimondii HOM05D007427 ORTHO05D006413 5.1e-07 58.2 66 48.5
A01p08960 Brassica napus HOM05D008344 ORTHO05D011034 6.7e-07 57.8 54 63.0
A03p58660 Brassica napus HOM05D008344 ORTHO05D006413 6.7e-07 57.8 54 63.0
C01p10500 Brassica napus HOM05D008344 ORTHO05D011034 6.7e-07 57.8 54 63.0
BraA01t00842Z Brassica rapa HOM05D008344 ORTHO05D011034 6.7e-07 57.8 54 63.0
BraA03t14927Z Brassica rapa HOM05D008344 ORTHO05D006413 6.7e-07 57.8 54 63.0
Gohir.A08G193800 Gossypium hirsutum HOM05D007427 ORTHO05D006413 6.7e-07 57.8 66 48.5
AT4G29030 Arabidopsis thaliana HOM05D008344 ORTHO05D006413 1.1e-06 57.0 51 64.7
Atru.chr5.1886 Acer truncatum HOM05D007427 ORTHO05D006413 1.5e-06 56.6 80 45.0
SalBow4G2254 Salvia bowleyana HOM05D007427 ORTHO05D006413 1.5e-06 56.6 57 63.2
BolC1t01011H Brassica oleracea HOM05D008344 ORTHO05D006413 1.9e-06 56.2 54 61.1
TWI59G1478 Tripterygium wilfordii HOM05D007427 ORTHO05D006413 1.9e-06 56.2 57 54.4
Lalb_Chr02g0152981 Lupinus albus HOM05D007427 ORTHO05D006413 2.5e-06 55.8 64 62.5
Nitab4.5_0000813g0050 Nicotiana tabacum HOM05D014142 ORTHO05D006413 3.3e-06 55.5 62 54.8
Nitab4.5_0001657g0050 Nicotiana tabacum HOM05D014142 ORTHO05D006413 3.3e-06 55.5 62 54.8
Sp7g26970 Schrenkiella parvula HOM05D008344 ORTHO05D006413 3.3e-06 55.5 54 61.1
unitig_22.g6317 Utricularia gibba HOM05D007427 ORTHO05D006413 3.3e-06 55.5 62 50.0
Migut.N02250 Erythranthe guttata HOM05D007427 ORTHO05D006413 4.3e-06 55.1 64 51.6
BcaB03g12592 Brassica carinata HOM05D008344 ORTHO05D006413 5.6e-06 54.7 63 57.1
BcaC09g51682 Brassica carinata HOM05D008344 ORTHO05D006413 5.6e-06 54.7 51 64.7
PGSC0003DMG400015809 Solanum tuberosum HOM05D014142 ORTHO05D006413 5.6e-06 54.7 55 58.2
CsaV3_7G025680 Cucumis sativus L. HOM05D007427 ORTHO05D006413 7.4e-06 54.3 53 54.7
Duzib138G0919 Durio zibethinus HOM05D007427 ORTHO05D006413 7.4e-06 54.3 81 40.7
Sopen09g025130 Solanum pennellii HOM05D014142 ORTHO05D006413 7.4e-06 54.3 60 55.0
unitig_8.g3079 Utricularia gibba HOM05D007427 ORTHO05D006413 7.4e-06 54.3 57 54.4
DCAR_012627 Daucus carota HOM05D007427 ORTHO05D006413 9.6e-06 53.9 55 54.5
Sopen09g025140 Solanum pennellii HOM05D014142 ORTHO05D006413 9.6e-06 53.9 60 55.0


User provided reference genes

Program Settings