Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
VMungo1383G2803 Vigna mungo HOM05D003866 ORTHO05D004508 2.3e-131 472.2 238 100.0
Phvul.001G205200 Phaseolus vulgaris HOM05D003866 ORTHO05D004508 1.5e-122 443.0 238 93.3
Glyma.19G209400 Glycine max HOM05D003866 ORTHO05D004508 7.9e-116 420.6 235 89.8
Glyma.03G212300 Glycine max HOM05D003866 ORTHO05D004508 2.5e-114 415.6 236 88.6
Lj1g0017340 Lotus japonicus HOM05D003866 ORTHO05D004508 9.4e-109 397.1 233 84.5
Lalb_Chr04g0259781 Lupinus albus HOM05D003866 ORTHO05D004508 7.9e-108 394.0 230 83.5
Ca_09142_v3 Cicer arietinum L. HOM05D003866 ORTHO05D004508 1.8e-107 392.9 235 81.3
arahy.Tifrunner.gnm1.ann1.44W6WI Arachis hypogaea HOM05D003866 ORTHO05D004508 1.1e-106 390.2 229 84.7
TPR.G9596 Trifolium pratense HOM05D003866 ORTHO05D004508 1.9e-106 389.4 235 82.1
Medtr2g014120 Medicago truncatula HOM05D003866 ORTHO05D004508 9.7e-106 387.1 234 82.1
Medtr7g108540 Medicago truncatula HOM05D003866 ORTHO05D004508 1.3e-105 386.7 234 82.1
Psat3g022720 Pisum sativum HOM05D003866 ORTHO05D004508 3.7e-105 385.2 233 82.4
arahy.Tifrunner.gnm1.ann1.AT77GA Arachis hypogaea HOM05D003866 ORTHO05D004508 1.3e-102 376.7 229 81.2
GSVIVG01027965001 Vitis vinifera HOM05D003866 ORTHO05D004508 4.8e-97 358.2 232 76.3
Prupe.8G257100 Prunus persica HOM05D003866 ORTHO05D004508 7.7e-95 350.9 234 70.9
Eucgr.K03458 Eucalyptus grandis HOM05D003866 ORTHO05D004508 1.0e-94 350.5 229 75.1
Lj1A33G82 Lonicera japonica HOM05D003866 ORTHO05D004508 3.8e-94 348.6 228 74.1
CSS0038127 Camellia sinensis var. sinensis HOM05D003866 ORTHO05D004508 5.5e-93 344.7 229 74.2
Potri.010G206900 Populus trichocarpa HOM05D003866 ORTHO05D004508 7.2e-93 344.4 225 73.8
RcHm_v2.0_Chr5g0006471 Rosa chinensis HOM05D003866 ORTHO05D004508 7.2e-93 344.4 232 71.1
Atru.chr5.1203 Acer truncatum HOM05D003866 ORTHO05D004508 1.2e-92 343.6 225 74.2
CANSAT25G0267 Cannabis sativa HOM05D003866 ORTHO05D004508 1.2e-92 343.6 224 75.4
Dinv33030 Davidia involucrata HOM05D003866 ORTHO05D004508 1.2e-92 343.6 225 73.8
CSS0036127 Camellia sinensis var. sinensis HOM05D003866 ORTHO05D004508 1.6e-92 343.2 229 74.7
Rhsim13G0013000 Rhododendron simsii HOM05D003866 ORTHO05D004508 2.1e-92 342.8 225 74.2
Haze_04883 Corylus avellana HOM05D003866 ORTHO05D004508 2.7e-92 342.4 225 74.2
Dinv19723 Davidia involucrata HOM05D003866 ORTHO05D004508 3.6e-92 342.0 225 74.7
vmacro02471 Vaccinium macrocarpon HOM05D003866 ORTHO05D004508 3.6e-92 342.0 225 73.3
CANSAT25G2840 Cannabis sativa HOM05D003866 ORTHO05D004508 4.7e-92 341.7 224 75.0
MD03G1282400 Malus domestica HOM05D003866 ORTHO05D004508 1.0e-91 340.5 228 71.5
MD11G1303900 Malus domestica HOM05D003866 ORTHO05D004508 1.8e-91 339.7 228 72.4
RcHm_v2.0_Chr6g0293371 Rosa chinensis HOM05D003866 ORTHO05D004508 1.8e-91 339.7 232 70.7
CiPaw.08G097800 Carya illinoinensis HOM05D003866 ORTHO05D004508 2.3e-91 339.3 225 72.0
Ciclev10022066m.g Citrus clementina HOM05D003866 ORTHO05D004508 2.3e-91 339.3 228 72.8
Cfa005958 Carpinus fangiana HOM05D003866 ORTHO05D004508 3.0e-91 339.0 225 74.2
ECA236G1731 Erigeron canadensis HOM05D003866 ORTHO05D004508 6.7e-91 337.8 224 71.4
RhsimUnG0168700 Rhododendron simsii HOM05D003866 ORTHO05D004508 1.1e-90 337.0 225 72.0
FAN15G0670 Fragaria x ananassa HOM05D003866 ORTHO05D004508 1.5e-90 336.7 232 70.3
HanXRQChr04g0118161 Helianthus annuus HOM05D003866 ORTHO05D004508 2.6e-90 335.9 224 70.5
TWI14G1088 Tripterygium wilfordii HOM05D003866 ORTHO05D004508 2.6e-90 335.9 219 73.5
FvH4_2g25231 Fragaria vesca HOM05D003866 ORTHO05D004508 7.4e-90 334.3 238 68.9
FvH4_3g05411 Fragaria vesca HOM05D003866 ORTHO05D004508 7.4e-90 334.3 232 69.4
Nitab4.5_0000051g0210 Nicotiana tabacum HOM05D003866 ORTHO05D004508 9.7e-90 334.0 229 71.2
Oeu024509.1 Olea europaea HOM05D003866 ORTHO05D004508 9.7e-90 334.0 225 73.8
AT2G27490 Arabidopsis thaliana HOM05D003866 ORTHO05D004508 1.3e-89 333.6 223 71.7
Sabra08G0038800 Salix brachista HOM05D003866 ORTHO05D004508 1.3e-89 333.6 223 72.6
Lsat_1_v5_gn_8_54720 Lactuca sativa HOM05D003866 ORTHO05D004508 1.7e-89 333.2 224 70.1
Lj1C0G2 Lonicera japonica HOM05D003866 ORTHO05D004508 1.7e-89 333.2 216 75.0
HanXRQChr06g0163901 Helianthus annuus HOM05D003866 ORTHO05D004508 2.2e-89 332.8 224 69.6
Nitab4.5_0004737g0020 Nicotiana tabacum HOM05D003866 ORTHO05D004508 2.2e-89 332.8 229 71.2
FAN11G1587 Fragaria x ananassa HOM05D003866 ORTHO05D004508 3.7e-89 332.0 232 69.0
Actinidia24328 Actinidia chinensis HOM05D003866 ORTHO05D004508 4.8e-89 331.6 228 71.9
Sopen11g008460 Solanum pennellii HOM05D003866 ORTHO05D004508 8.2e-89 330.9 225 72.4
AL4G21480 Arabidopsis lyrata HOM05D003866 ORTHO05D004508 1.4e-88 330.1 223 71.7
arahy.Tifrunner.gnm1.ann1.9DBC1D Arachis hypogaea HOM05D003866 ORTHO05D004508 1.4e-88 330.1 232 75.4
PGSC0003DMG400027789 Solanum tuberosum HOM05D003866 ORTHO05D004508 1.4e-88 330.1 225 71.6
Manes.13G006100 Manihot esculenta HOM05D003866 ORTHO05D004508 1.8e-88 329.7 225 71.1
PSO832G2724 Papaver somniferum HOM05D003866 ORTHO05D004508 2.4e-88 329.3 236 71.6
Manes.12G006300 Manihot esculenta HOM05D003866 ORTHO05D004508 3.1e-88 328.9 224 72.8
SGA_v2.0_scaffold1G00383 Striga asiatica HOM05D003866 ORTHO05D004508 3.1e-88 328.9 229 70.7
MSTRG.18171 Avicennia marina HOM05D003866 ORTHO05D004508 9.1e-88 327.4 229 70.7
BcaC01g04944 Brassica carinata HOM05D003866 ORTHO05D004508 9.1e-88 327.4 223 71.3
A03p26580 Brassica napus HOM05D003866 ORTHO05D004508 9.1e-88 327.4 223 71.3
BraA03t11870Z Brassica rapa HOM05D003866 ORTHO05D004508 9.1e-88 327.4 223 71.3
DCAR_024209 Daucus carota HOM05D003866 ORTHO05D004508 9.1e-88 327.4 229 69.4
C03p31840 Brassica napus HOM05D003866 ORTHO05D004508 1.2e-87 327.0 223 70.9
Solyc11g013460.2 Solanum lycopersicum HOM05D003866 ORTHO05D004508 1.6e-87 326.6 225 71.1
BcaB01g03075 Brassica carinata HOM05D003866 ORTHO05D004508 2.0e-87 326.2 223 70.4
CAN.G337.118 Capsicum annuum HOM05D003866 ORTHO05D004508 2.0e-87 326.2 229 69.9
CsaV3_4G000530 Cucumis sativus L. HOM05D003866 ORTHO05D004508 2.0e-87 326.2 219 71.7
Cc01_g20600 Coffea canephora HOM05D003866 ORTHO05D004508 2.6e-87 325.9 225 70.2
Lj2A1190T61 Lonicera japonica HOM05D003866 ORTHO05D004508 2.6e-87 325.9 225 70.2
TAR636G2430 Trochodendron aralioides HOM05D003866 ORTHO05D004508 3.5e-87 325.5 233 67.8
BolC3t15527H Brassica oleracea HOM05D003866 ORTHO05D004508 4.5e-87 325.1 223 70.9
CARHR120140 Cardamine hirsuta HOM05D003866 ORTHO05D004508 4.5e-87 325.1 224 71.0
FAN27G2002 Fragaria x ananassa HOM05D003866 ORTHO05D004508 5.9e-87 324.7 232 68.1
RcHm_v2.0_Chr7g0221651 Rosa chinensis HOM05D003866 ORTHO05D004508 7.7e-87 324.3 232 67.7
MBI19_g41921_MAGBIO Magnolia biondii HOM05D003866 ORTHO05D004508 1.0e-86 323.9 225 70.7
Sed0016300 Sechium edule HOM05D003866 ORTHO05D004508 1.0e-86 323.9 217 71.4
Aa31LG5G8830 Aethionema arabicum HOM05D003866 ORTHO05D004508 1.3e-86 323.6 223 71.3
Cc01_g06400 Coffea canephora HOM05D003866 ORTHO05D004508 1.3e-86 323.6 225 69.8
Cpa.g.sc11.50 Carica papaya HOM05D003866 ORTHO05D004508 1.7e-86 323.2 232 68.5
Nn4g25882 Nelumbo nucifera HOM05D003866 ORTHO05D004508 1.7e-86 323.2 226 69.0
Sp4g10360 Schrenkiella parvula HOM05D003866 ORTHO05D004508 1.7e-86 323.2 223 70.0
Thhalv10017203m.g Eutrema salsugineum HOM05D003866 ORTHO05D004508 2.9e-86 322.4 225 69.8
FvH4_7g06070 Fragaria vesca HOM05D003866 ORTHO05D004508 3.8e-86 322.0 234 66.7
PSO210G0692 Papaver somniferum HOM05D003866 ORTHO05D004508 5.0e-86 321.6 236 70.8
A07p18280 Brassica napus HOM05D003866 ORTHO05D004508 8.5e-86 320.9 223 69.5
Migut.I00105 Erythranthe guttata HOM05D003866 ORTHO05D004508 8.5e-86 320.9 229 69.9
SalBow2G1869 Salvia bowleyana HOM05D003866 ORTHO05D004508 2.5e-85 319.3 229 69.4
Peaxi162Scf00140g01011 Petunia axillaris HOM05D003866 ORTHO05D004508 3.2e-85 318.9 224 69.6
PGSC0003DMG400027790 Solanum tuberosum HOM05D003866 ORTHO05D004508 3.2e-85 318.9 229 68.6
EL10Ac4g07959 Beta vulgaris HOM05D003866 ORTHO05D004508 9.4e-85 317.4 223 70.4
Thhalv10017190m.g Eutrema salsugineum HOM05D003866 ORTHO05D004508 1.2e-84 317.0 222 68.0
Prupe.6G179600 Prunus persica HOM05D003866 ORTHO05D004508 1.2e-84 317.0 228 66.7
COL.COLO4_23391 Corchorus olitorius HOM05D003866 ORTHO05D004508 1.6e-84 316.6 232 67.2
PGR031G3621 Punica granatum HOM05D003866 ORTHO05D004508 2.7e-84 315.8 271 61.3
TAR365G0487 Trochodendron aralioides HOM05D003866 ORTHO05D004508 2.7e-84 315.8 232 68.5
AUR62022186 Chenopodium quinoa HOM05D003866 ORTHO05D004508 4.7e-84 315.1 225 69.8
Aqoxy5G00709 Aquilegia oxysepala HOM05D003866 ORTHO05D004508 8.0e-84 314.3 233 66.5
Hund18125 Selenicereus undatus HOM05D003866 ORTHO05D004508 1.4e-83 313.5 228 68.4
TAR365G0990 Trochodendron aralioides HOM05D003866 ORTHO05D004508 1.8e-83 313.2 219 71.7
unitig_8.g3710 Utricularia gibba HOM05D003866 ORTHO05D004508 2.3e-83 312.8 226 67.7
Os01g0360600 Oryza sativa ssp. japonica HOM05D003866 ORTHO05D004508 5.2e-83 311.6 225 66.7
AUR62031891 Chenopodium quinoa HOM05D003866 ORTHO05D004508 2.0e-82 309.7 225 69.3
FAN24G3471 Fragaria x ananassa HOM05D003866 ORTHO05D004508 3.3e-82 308.9 202 73.8
Gohir.D12G010300 Gossypium hirsutum HOM05D003866 ORTHO05D004508 9.7e-82 307.4 224 66.5
Gorai.008G010300 Gossypium raimondii HOM05D003866 ORTHO05D004508 9.7e-82 307.4 230 65.7
Duzib133G0502 Durio zibethinus HOM05D003866 ORTHO05D004508 1.3e-81 307.0 219 67.6
Gohir.A12G010200 Gossypium hirsutum HOM05D003866 ORTHO05D004508 2.2e-81 306.2 230 65.2
Gohir.D04G003400 Gossypium hirsutum HOM05D003866 ORTHO05D004508 8.2e-81 304.3 230 64.8
Gorai.012G004500 Gossypium raimondii HOM05D003866 ORTHO05D004508 1.8e-80 303.1 229 65.1
Zm00001eb041190 Zea mays HOM05D003866 ORTHO05D004508 4.1e-80 302.0 225 64.9
ATR0706G042 Amborella trichopoda HOM05D003866 ORTHO05D004508 1.0e-78 297.4 226 65.9
Sp4g10280 Schrenkiella parvula HOM05D003866 ORTHO05D004508 1.3e-78 297.0 222 65.8
Carub.0004s0812 Capsella rubella HOM05D003866 ORTHO05D004508 2.2e-78 296.2 205 71.2
BcaB02g10095 Brassica carinata HOM05D003866 ORTHO05D004508 6.5e-78 294.7 225 64.9
FAN10G2101 Fragaria x ananassa HOM05D003866 ORTHO05D004508 6.5e-78 294.7 234 62.4
Sc03g0003200 Simmondsia chinensis HOM05D006805 ORTHO05D004508 7.2e-77 291.2 196 75.5
ClCG10G010790 Citrullus lanatus HOM05D003866 ORTHO05D004508 2.7e-76 289.3 314 49.4
RcHm_v2.0_Chr1g0333581 Rosa chinensis HOM05D003866 ORTHO05D004508 4.7e-76 288.5 235 62.1
CDE09G0414 Ceratophyllum demersum HOM05D003866 ORTHO05D004508 8.0e-76 287.7 228 63.6
SEGI_05441 Sequoiadendron giganteum HOM05D003866 ORTHO05D004508 8.0e-76 287.7 228 62.7
Thecc.01G295900 Theobroma cacao HOM05D003866 ORTHO05D004508 1.6e-71 273.5 205 62.9
Sabra10G0159700 Salix brachista HOM05D003866 ORTHO05D002218 3.5e-71 272.3 189 69.3
Gohir.A05G412600 Gossypium hirsutum HOM05D003866 ORTHO05D004508 1.0e-67 260.8 205 62.4
Actinidia32233 Actinidia chinensis HOM05D003866 ORTHO05D004508 1.2e-66 257.3 179 70.4
AL8G17300 Arabidopsis lyrata HOM05D003866 ORTHO05D004508 1.2e-66 257.3 233 59.2
Hund18126 Selenicereus undatus HOM05D003866 ORTHO05D004508 2.2e-65 253.1 196 63.3
Mapoly0028s0053 Marchantia polymorpha HOM05D003866 ORTHO05D004508 2.3e-62 243.0 225 57.8
RcHm_v2.0_Chr1g0334201 Rosa chinensis HOM05D003866 ORTHO05D004508 1.9e-61 240.0 148 76.4
SGA_v2.0_scaffold25G10945 Striga asiatica HOM05D003866 ORTHO05D004508 3.6e-60 235.7 183 65.0
Pp3c2_13260 Physcomitrium patens HOM05D003866 ORTHO05D004508 1.8e-59 233.4 224 53.6
Nn4g25856 Nelumbo nucifera HOM05D003866 ORTHO05D004508 5.2e-59 231.9 214 57.0
Potri.008G053601 Populus trichocarpa HOM05D003866 ORTHO05D004508 7.5e-58 228.0 133 81.2
AagrBONN_evm.TU.Sc2ySwM_228.2237 Anthoceros agrestis HOM05D003866 ORTHO05D004508 2.4e-56 223.0 227 53.3
FAN25G0878 Fragaria x ananassa HOM05D003866 ORTHO05D004508 9.2e-56 221.1 144 72.9
SMO144G0118 Selaginella moellendorffii HOM05D003866 ORTHO05D004508 3.5e-55 219.2 219 53.4
FAN20G0831 Fragaria x ananassa HOM05D003866 ORTHO05D004508 1.1e-51 207.6 124 79.0
MD12G1063200 Malus domestica HOM05D003866 ORTHO05D004508 5.1e-46 188.7 144 64.6
arahy.Tifrunner.gnm1.ann1.ZE4P1V Arachis hypogaea HOM05D003866 ORTHO05D004508 6.6e-46 188.3 147 64.6
EL10Ac1g00209 Beta vulgaris HOM05D003866 ORTHO05D004508 8.6e-46 188.0 138 68.1
BcaC02g10889 Brassica carinata HOM05D003866 ORTHO05D004508 2.3e-43 179.9 137 62.0
RcHm_v2.0_Chr1g0333491 Rosa chinensis HOM05D003866 ORTHO05D004508 7.5e-42 174.9 119 65.5
Sc03g0003210 Simmondsia chinensis HOM05D003866 ORTHO05D004508 7.5e-42 174.9 132 68.2
SHI02446 Sapria himalayana HOM05D003866 ORTHO05D004508 9.9e-42 174.5 135 63.7
Zm00001eb341290 Zea mays HOM05D003866 ORTHO05D004508 6.4e-41 171.8 140 60.0
Carub.0001s3498 Capsella rubella HOM05D003866 ORTHO05D004508 4.1e-40 169.1 135 62.2
Cre10.g436150 Chlamydomonas reinhardtii HOM05D003866 ORTHO05D004508 3.0e-38 162.9 192 45.8
arahy.Tifrunner.gnm1.ann1.86SF76 Arachis hypogaea HOM05D003866 ORTHO05D004508 8.6e-38 161.4 155 57.4
CBR_g9110 Chara braunii HOM05D003958 ORTHO05D004864 3.3e-37 159.5 185 45.9
HPP92_010697 Vanilla planifolia HOM05D001483 ORTHO05D001463 6.2e-36 155.2 192 46.9
Psat5g098240 Pisum sativum HOM05D001063 ORTHO05D000986 1.2e-34 151.0 123 64.2
RcHm_v2.0_Chr4g0419041 Rosa chinensis HOM05D003866 ORTHO05D004508 1.5e-34 150.6 126 60.3
Oeu047454.1 Olea europaea HOM05D003866 ORTHO05D004508 9.9e-34 147.9 84 79.8
QL12p026964 Quercus lobata HOM05D003866 ORTHO05D004508 8.4e-33 144.8 84 83.3
arahy.Tifrunner.gnm1.ann1.VNWS1A Arachis hypogaea HOM05D003866 ORTHO05D004508 1.9e-32 143.7 107 68.2
BolC4t23901H Brassica oleracea HOM05D003866 ORTHO05D004508 5.4e-32 142.1 109 67.0
GSVIVG01010954001 Vitis vinifera HOM05D003866 ORTHO05D004508 2.7e-31 139.8 88 78.4
BraA07t29544Z Brassica rapa HOM05D003866 ORTHO05D004508 1.3e-30 137.5 102 69.6
BcaC02g10888 Brassica carinata HOM05D003866 ORTHO05D004508 2.8e-28 129.8 81 79.0
CAN.G174.11 Capsicum annuum HOM05D003866 ORTHO05D004508 1.4e-27 127.5 84 72.6
ClCG10G010800 Citrullus lanatus HOM05D003866 ORTHO05D004508 9.0e-27 124.8 84 67.9
MSTRG.21619 Avicennia marina HOM05D003866 ORTHO05D004508 1.5e-26 124.0 94 69.1
C04p24060 Brassica napus HOM05D003866 ORTHO05D004508 2.0e-26 123.6 94 68.1
CAN.G255.6 Capsicum annuum HOM05D003866 ORTHO05D004508 1.7e-25 120.6 77 75.3
SEGI_13628 Sequoiadendron giganteum HOM05D003866 ORTHO05D004508 3.5e-23 112.8 84 67.9
FAN06G0461 Fragaria x ananassa HOM05D003866 ORTHO05D004508 3.9e-22 109.4 84 63.1
CAN.G255.7 Capsicum annuum HOM05D003866 ORTHO05D004508 1.1e-21 107.8 100 56.0
QL12p026975 Quercus lobata HOM05D003866 ORTHO05D004508 1.9e-21 107.1 70 74.3
FvH4_3g05410 Fragaria vesca HOM05D003866 ORTHO05D004508 3.3e-21 106.3 79 63.3
RcHm_v2.0_Chr6g0258301 Rosa chinensis HOM05D003866 ORTHO05D004508 3.6e-20 102.8 125 45.6
arahy.Tifrunner.gnm1.ann1.TVUZ4W Arachis hypogaea HOM05D003866 ORTHO05D004508 2.6e-18 96.7 125 49.6
RcHm_v2.0_Chr4g0419031 Rosa chinensis HOM05D003866 ORTHO05D004508 3.2e-16 89.7 89 51.7
PRCOL_00003268 Prasinoderma coloniale HOM05D003001 ORTHO05D003494 5.4e-16 89.0 175 36.0
DCAR_024210 Daucus carota HOM05D003866 ORTHO05D004508 2.7e-15 86.7 62 69.4
MD14G1128400 Malus domestica HOM05D003866 ORTHO05D004508 2.3e-14 83.6 63 68.3
ClCG10G010610 Citrullus lanatus HOM05D003866 ORTHO05D004508 1.1e-13 81.3 76 56.6
MCO11G607 Micromonas commoda HOM05D003866 ORTHO05D004508 1.3e-12 77.8 221 31.2
RcHm_v2.0_Chr1g0333451 Rosa chinensis HOM05D003866 ORTHO05D004508 2.0e-10 70.5 61 59.0
Cre13.g586250 Chlamydomonas reinhardtii HOM05D003866 ORTHO05D004508 4.5e-10 69.3 188 30.3
HanXRQChr04g0118191 Helianthus annuus HOM05D003866 ORTHO05D004508 4.5e-10 69.3 66 48.5
SHI02445 Sapria himalayana HOM05D003866 ORTHO05D004508 2.9e-09 66.6 48 62.5


User provided reference genes

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