Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
VMungo1383G2364 Vigna mungo HOM05D000361 ORTHO05D007806 2.8e-197 691.8 359 100.0
Phvul.001G174700 Phaseolus vulgaris HOM05D000361 ORTHO05D007806 3.6e-104 382.5 358 63.7
Glyma.19G178600 Glycine max HOM05D000361 ORTHO05D007806 1.1e-97 360.9 356 60.4
Lj1g0004431 Lotus japonicus HOM05D000361 ORTHO05D007806 8.0e-96 354.8 359 59.3
Lalb_Chr20g0112951 Lupinus albus HOM05D000361 ORTHO05D007806 2.9e-93 346.3 359 57.9
Medtr7g100680 Medicago truncatula HOM05D000361 ORTHO05D007806 4.9e-93 345.5 359 57.7
arahy.Tifrunner.gnm1.ann1.C871DQ Arachis hypogaea HOM05D000361 ORTHO05D007806 4.1e-92 342.4 359 57.4
Psat3g045560 Pisum sativum HOM05D000361 ORTHO05D007806 1.1e-89 334.3 357 56.6
Ca_08824_v3 Cicer arietinum L. HOM05D000361 ORTHO05D007806 4.3e-89 332.4 354 57.1
TPR.G36915 Trifolium pratense HOM05D000361 ORTHO05D007806 4.0e-87 325.9 358 55.3
arahy.Tifrunner.gnm1.ann1.SD4I8G Arachis hypogaea HOM05D000361 ORTHO05D007806 1.1e-84 317.8 343 56.3
Actinidia04697 Actinidia chinensis HOM05D000361 ORTHO05D007806 7.0e-84 315.1 358 53.1
QL07p045302 Quercus lobata HOM05D000361 ORTHO05D007806 6.6e-82 308.5 357 51.5
SGA_v2.0_scaffold126G33895 Striga asiatica HOM05D000361 ORTHO05D007806 6.6e-82 308.5 356 51.7
Medtr7g061220 Medicago truncatula HOM05D000106 ORTHO05D001887 2.5e-81 306.6 323 56.7
vmacro20063 Vaccinium macrocarpon HOM05D000361 ORTHO05D007806 5.6e-81 305.4 358 52.0
Gohir.D01G204700 Gossypium hirsutum HOM05D000361 ORTHO05D007806 7.3e-81 305.1 356 51.4
CiPaw.09G180100 Carya illinoinensis HOM05D000361 ORTHO05D007806 2.1e-80 303.5 358 50.6
PGR004G1754 Punica granatum HOM05D000361 ORTHO05D007806 2.1e-80 303.5 358 51.4
Haze_20652 Corylus avellana HOM05D000361 ORTHO05D007806 3.6e-80 302.8 358 51.1
Gorai.002G248900 Gossypium raimondii HOM05D000361 ORTHO05D007806 3.6e-80 302.8 356 50.3
BcaC05g29691 Brassica carinata HOM05D000361 ORTHO05D007806 4.7e-80 302.4 356 50.3
Cc06_g03540 Coffea canephora HOM05D000361 ORTHO05D007806 6.2e-80 302.0 358 50.8
Duzib128G0222 Durio zibethinus HOM05D000361 ORTHO05D007806 6.2e-80 302.0 356 51.1
Cfa017506 Carpinus fangiana HOM05D000361 ORTHO05D007806 8.1e-80 301.6 357 51.3
Nn2g10649 Nelumbo nucifera HOM05D000361 ORTHO05D007806 1.4e-79 300.8 356 50.8
CsaV3_3G035520 Cucumis sativus L. HOM05D000361 ORTHO05D007806 3.1e-79 299.7 358 51.1
Potri.006G131900 Populus trichocarpa HOM05D000361 ORTHO05D007806 3.1e-79 299.7 352 51.1
Sabra06G0103500 Salix brachista HOM05D000361 ORTHO05D007806 3.1e-79 299.7 352 51.4
BraA05t22721Z Brassica rapa HOM05D000361 ORTHO05D007806 5.2e-79 298.9 356 49.7
Cpa.g.sc114.44 Carica papaya HOM05D000361 ORTHO05D007806 5.2e-79 298.9 358 50.6
Solyc09g007330.4 Solanum lycopersicum HOM05D000361 ORTHO05D007806 8.9e-79 298.1 326 53.1
C05p58430 Brassica napus HOM05D000361 ORTHO05D007806 1.2e-78 297.7 356 49.4
BolC5t34495H Brassica oleracea HOM05D000361 ORTHO05D007806 1.5e-78 297.4 356 49.4
TWI74G0816 Tripterygium wilfordii HOM05D000361 ORTHO05D007806 1.5e-78 297.4 358 50.6
A05p39400 Brassica napus HOM05D000361 ORTHO05D007806 2.0e-78 297.0 356 49.4
ClCG10G020570 Citrullus lanatus HOM05D000361 ORTHO05D007806 2.6e-78 296.6 359 52.4
MELO3C009313.2 Cucumis melo HOM05D000361 ORTHO05D007806 4.4e-78 295.8 358 50.3
MD04G1104500 Malus domestica HOM05D000361 ORTHO05D007806 5.8e-78 295.4 359 50.4
Sopen09g002210 Solanum pennellii HOM05D000361 ORTHO05D007806 5.8e-78 295.4 326 52.8
THA.LOC104816318 Tarenaya hassleriana HOM05D000361 ORTHO05D007806 9.9e-78 294.7 357 49.0
Atru.chr8.2554 Acer truncatum HOM05D000361 ORTHO05D007806 1.7e-77 293.9 323 53.3
AL3G20870 Arabidopsis lyrata HOM05D000361 ORTHO05D007806 1.9e-76 290.4 356 49.7
AT3G09660 Arabidopsis thaliana HOM05D000361 ORTHO05D007806 1.9e-76 290.4 356 49.7
FAN14G3803 Fragaria x ananassa HOM05D000361 ORTHO05D007806 2.4e-76 290.0 352 50.9
Hma1.2p1_0111F.1_g053870 Hydrangea macrophylla HOM05D000361 ORTHO05D007806 3.2e-76 289.7 319 52.4
Peaxi162Scf00005g04713 Petunia axillaris HOM05D000361 ORTHO05D007806 3.2e-76 289.7 321 51.4
CAN.G608.18 Capsicum annuum HOM05D000361 ORTHO05D007806 4.1e-76 289.3 326 51.8
FAN09G3820 Fragaria x ananassa HOM05D000361 ORTHO05D007806 5.4e-76 288.9 352 50.9
FAN05G4916 Fragaria x ananassa HOM05D000361 ORTHO05D007806 7.1e-76 288.5 352 50.9
Lj2C107G5 Lonicera japonica HOM05D000361 ORTHO05D007806 7.1e-76 288.5 358 50.3
FAN02G4129 Fragaria x ananassa HOM05D000361 ORTHO05D007806 1.2e-75 287.7 352 50.6
Manes.08G003200 Manihot esculenta HOM05D000361 ORTHO05D007806 2.1e-75 287.0 344 50.6
GSVIVG01025535001 Vitis vinifera HOM05D000361 ORTHO05D007806 2.7e-75 286.6 343 50.1
RcHm_v2.0_Chr3g0468711 Rosa chinensis HOM05D000361 ORTHO05D007806 3.5e-75 286.2 352 50.3
Oeu029422.1 Olea europaea HOM05D000361 ORTHO05D007806 6.0e-75 285.4 341 49.9
CANSAT80G1962 Cannabis sativa HOM05D000361 ORTHO05D007806 7.8e-75 285.0 347 50.7
RhsimUnG0118500 Rhododendron simsii HOM05D000361 ORTHO05D007806 7.8e-75 285.0 358 49.2
Sed0028064 Sechium edule HOM05D000361 ORTHO05D007806 1.3e-74 284.3 358 48.9
Ah.08g211920 Amaranthus hybridus HOM05D000361 ORTHO05D007806 6.6e-74 282.0 346 49.1
ECA233G2985 Erigeron canadensis HOM05D000361 ORTHO05D007806 6.6e-74 282.0 356 47.5
Hund20156 Selenicereus undatus HOM05D000361 ORTHO05D007806 3.3e-73 279.6 344 50.0
TAR636G0149 Trochodendron aralioides HOM05D000361 ORTHO05D007806 3.3e-73 279.6 170 84.7
Nitab4.5_0001142g0060 Nicotiana tabacum HOM05D000361 ORTHO05D007806 9.5e-73 278.1 309 51.1
PSO339G3031 Papaver somniferum HOM05D000361 ORTHO05D007806 3.6e-72 276.2 356 48.0
PSO063G5136 Papaver somniferum HOM05D000361 ORTHO05D007806 4.7e-72 275.8 357 48.2
CDE04G3548 Ceratophyllum demersum HOM05D000361 ORTHO05D007806 6.2e-72 275.4 343 48.7
SHI12574 Sapria himalayana HOM05D000361 ORTHO05D007806 1.8e-71 273.9 317 50.2
AUR62040504 Chenopodium quinoa HOM05D000361 ORTHO05D007806 3.1e-71 273.1 334 48.2
Migut.J00416 Erythranthe guttata HOM05D000361 ORTHO05D007806 6.8e-71 271.9 168 83.3
ATR1159G085 Amborella trichopoda HOM05D000361 ORTHO05D007806 8.9e-71 271.6 342 49.1
Aqoxy4G03188 Aquilegia oxysepala HOM05D000361 ORTHO05D007806 8.9e-71 271.6 355 48.2
AUR62042605 Chenopodium quinoa HOM05D000361 ORTHO05D007806 8.9e-71 271.6 331 47.7
HanXRQChr13g0399761 Helianthus annuus HOM05D000361 ORTHO05D007806 1.2e-70 271.2 352 47.4
Sc07g0006240 Simmondsia chinensis HOM05D000361 ORTHO05D007806 1.5e-70 270.8 170 79.4
Thhalv10020112m.g Eutrema salsugineum HOM05D000361 ORTHO05D007806 2.0e-70 270.4 178 78.7
Carub.0003s0875 Capsella rubella HOM05D000361 ORTHO05D007806 5.8e-70 268.9 168 81.5
Eucgr.A01177 Eucalyptus grandis HOM05D000361 ORTHO05D007806 5.8e-70 268.9 170 81.2
Sp3g07990 Schrenkiella parvula HOM05D000361 ORTHO05D007806 9.9e-70 268.1 168 81.5
Aa31LG3G2080 Aethionema arabicum HOM05D000361 ORTHO05D007806 1.3e-69 267.7 168 80.4
CARHR084070 Cardamine hirsuta HOM05D000361 ORTHO05D007806 1.7e-69 267.3 168 81.0
Ciclev10013573m.g Citrus clementina HOM05D000361 ORTHO05D007806 4.9e-69 265.8 163 84.7
Thecc.05G053700 Theobroma cacao HOM05D000361 ORTHO05D007806 8.4e-69 265.0 168 81.0
EL10Ac7g17349 Beta vulgaris HOM05D000361 ORTHO05D007806 3.2e-68 263.1 168 78.6
Nitab4.5_0009766g0010 Nicotiana tabacum HOM05D000361 ORTHO05D007806 1.9e-65 253.8 153 83.7
MBI14_g47376_MAGBIO Magnolia biondii HOM05D000361 ORTHO05D007806 2.5e-65 253.4 292 51.7
SEGI_37013 Sequoiadendron giganteum HOM05D000361 ORTHO05D007806 4.8e-64 249.2 351 46.4
Lsat_1_v5_gn_6_29641 Lactuca sativa HOM05D000361 ORTHO05D007806 8.1e-64 248.4 351 44.7
TAR636G0796 Trochodendron aralioides HOM05D000361 ORTHO05D007806 5.8e-62 242.3 182 73.1
unitig_578.g15710 Utricularia gibba HOM05D000361 ORTHO05D007806 2.9e-61 240.0 316 46.8
SMO356G0297 Selaginella moellendorffii HOM05D000361 ORTHO05D007806 1.9e-57 227.3 159 71.7
COL.COLO4_27084 Corchorus olitorius HOM05D000361 ORTHO05D007806 2.1e-56 223.8 303 47.2
Mapoly0006s0301 Marchantia polymorpha HOM05D000361 ORTHO05D007806 9.0e-55 218.4 310 42.6
FvH4_6g15280 Fragaria vesca HOM05D000361 ORTHO05D007806 9.9e-54 214.9 303 46.5
DCAR_020872 Daucus carota HOM05D000361 ORTHO05D007806 2.2e-53 213.8 303 44.6
MBI14_g45130_MAGBIO Magnolia biondii HOM05D000361 ORTHO05D007806 6.4e-53 212.2 328 43.3
Pp3c24_12060 Physcomitrium patens HOM05D000361 ORTHO05D007806 1.3e-48 198.0 157 66.2
CSS0035526 Camellia sinensis var. sinensis HOM05D000361 ORTHO05D007806 2.3e-42 177.2 350 37.7
CSS0036867 Camellia sinensis var. sinensis HOM05D000361 ORTHO05D007806 6.7e-42 175.6 350 37.4
MSTRG.5719 Avicennia marina HOM05D000361 ORTHO05D007806 2.0e-38 164.1 95 85.3
CBR_g21769 Chara braunii HOM05D000361 ORTHO05D007806 2.5e-28 130.6 276 34.8
Prupe.6G241500 Prunus persica HOM05D000361 ORTHO05D007806 3.2e-28 130.2 246 39.0
Dinv37251 Davidia involucrata HOM05D000361 ORTHO05D007806 6.1e-27 125.9 246 39.0
MSTRG.5720 Avicennia marina HOM05D000361 ORTHO05D007806 1.1e-25 121.7 241 36.1
Cre16.g665950 Chlamydomonas reinhardtii HOM05D000361 ORTHO05D007806 3.3e-25 120.2 158 43.0
MCO15G371 Micromonas commoda HOM05D000361 ORTHO05D007806 2.6e-22 110.5 149 40.3
CDE04G1259 Ceratophyllum demersum HOM05D000361 ORTHO05D007806 1.3e-21 108.2 230 35.7
Gohir.A01G215900 Gossypium hirsutum HOM05D000361 ORTHO05D007806 1.9e-20 104.4 227 35.2
Sopen04g033730 Solanum pennellii HOM05D005164 ORTHO05D006398 9.7e-17 92.0 140 43.6
PRCOL_00006464 Prasinoderma coloniale HOM05D000361 ORTHO05D007806 6.3e-16 89.4 225 31.6
SGA_v2.0_scaffold9G05073 Striga asiatica HOM05D000361 ORTHO05D007806 1.0e-13 82.0 95 52.6
PSO541G6449 Papaver somniferum HOM05D000361 ORTHO05D007313 3.5e-06 57.0 120 31.7
PSO675G5964 Papaver somniferum HOM05D000361 ORTHO05D007313 5.9e-06 56.2 120 31.7


User provided reference genes

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