Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
VMungo1383G2032 Vigna mungo HOM05D004016 ORTHO05D004732 2.0e-132 475.7 235 100.0
VMungo0540G2292 Vigna mungo HOM05D004016 ORTHO05D004732 6.2e-105 384.4 238 84.0
Phvul.007G173300 Phaseolus vulgaris HOM05D004016 ORTHO05D004732 1.2e-47 194.1 149 71.1
Glyma.02G146200 Glycine max HOM05D004016 ORTHO05D004732 2.2e-46 189.9 149 69.1
VMungo0720G0880 Vigna mungo HOM05D004016 ORTHO05D004732 6.1e-44 181.8 134 73.1
Glyma.10G027800 Glycine max HOM05D004016 ORTHO05D004732 8.0e-44 181.4 151 68.9
Lj5g0005099 Lotus japonicus HOM05D004016 ORTHO05D004732 3.8e-22 109.4 154 47.4
Ca_09744_v3 Cicer arietinum L. HOM05D004016 ORTHO05D004732 5.6e-21 105.5 154 45.5
Lalb_Chr21g0306401 Lupinus albus HOM05D004016 ORTHO05D004732 5.6e-21 105.5 99 60.6
Lalb_Chr06g0162891 Lupinus albus HOM05D004016 ORTHO05D004732 1.6e-20 104.0 104 61.5
Lalb_Chr02g0142631 Lupinus albus HOM05D004016 ORTHO05D004732 2.0e-18 97.1 101 56.4
Ca_08613_v3 Cicer arietinum L. HOM05D004016 ORTHO05D004732 9.8e-18 94.7 112 49.1
Glyma.03G155700 Glycine max HOM05D004016 ORTHO05D004732 4.9e-17 92.4 152 45.4
TAR633G2817 Trochodendron aralioides HOM05D004016 ORTHO05D004732 1.1e-16 91.3 108 50.0
Atru.chr5.1471 Acer truncatum HOM05D004016 ORTHO05D004732 9.2e-16 88.2 83 54.2
Nitab4.5_0002928g0010 Nicotiana tabacum HOM05D004016 ORTHO05D004732 1.2e-15 87.8 102 50.0
arahy.Tifrunner.gnm1.ann1.256EAD Arachis hypogaea HOM05D004016 ORTHO05D004732 1.6e-15 87.4 169 40.2
Rhsim01G0273500 Rhododendron simsii HOM05D004016 ORTHO05D004732 1.6e-15 87.4 98 52.0
Glyma.19G157800 Glycine max HOM05D004016 ORTHO05D004732 2.0e-15 87.0 115 50.4
Haze_04687 Corylus avellana HOM05D004016 ORTHO05D004732 4.6e-15 85.9 117 51.3
Ah.02g110900 Amaranthus hybridus HOM05D004016 ORTHO05D004732 5.9e-15 85.5 112 49.1
Actinidia24906 Actinidia chinensis HOM05D004016 ORTHO05D004732 7.8e-15 85.1 98 49.0
Ciclev10022155m.g Citrus clementina HOM05D004016 ORTHO05D004732 7.8e-15 85.1 82 53.7
Cfa006163 Carpinus fangiana HOM05D004016 ORTHO05D004732 1.3e-14 84.3 116 50.9
Gohir.A08G065500 Gossypium hirsutum HOM05D004016 ORTHO05D004732 3.9e-14 82.8 121 46.3
Potri.002G050900 Populus trichocarpa HOM05D004016 ORTHO05D004732 3.9e-14 82.8 160 38.8
Actinidia21126 Actinidia chinensis HOM05D004016 ORTHO05D004732 6.6e-14 82.0 97 48.5
ClCG07G000350 Citrullus lanatus HOM05D004016 ORTHO05D004732 6.6e-14 82.0 96 51.0
MD03G1262100 Malus domestica HOM05D004016 ORTHO05D004732 8.6e-14 81.6 60 66.7
VMungo1383G1854 Vigna mungo HOM05D004016 ORTHO05D004732 8.6e-14 81.6 118 44.9
EL10Ac5g10544 Beta vulgaris HOM05D004016 ORTHO05D004732 1.5e-13 80.9 61 67.2
Gorai.004G078400 Gossypium raimondii HOM05D004016 ORTHO05D004732 1.5e-13 80.9 115 47.0
Phvul.001G153100 Phaseolus vulgaris HOM05D004016 ORTHO05D004732 1.5e-13 80.9 119 47.1
Dinv32914 Davidia involucrata HOM05D004016 ORTHO05D004732 1.9e-13 80.5 102 52.9
Gohir.D08G074000 Gossypium hirsutum HOM05D004016 ORTHO05D004732 1.9e-13 80.5 115 47.0
Nitab4.5_0009529g0030 Nicotiana tabacum HOM05D004016 ORTHO05D004732 1.9e-13 80.5 103 50.5
TPR.G27140 Trifolium pratense HOM05D004016 ORTHO05D004732 1.9e-13 80.5 149 42.3
COL.COLO4_09066 Corchorus olitorius HOM05D004016 ORTHO05D004732 2.5e-13 80.1 115 46.1
GSVIVG01001172001 Vitis vinifera HOM05D004016 ORTHO05D004732 2.5e-13 80.1 60 66.7
Lj2E1169T0 Lonicera japonica HOM05D004016 ORTHO05D004732 3.3e-13 79.7 102 49.0
Thecc.01G275600 Theobroma cacao HOM05D004016 ORTHO05D004732 3.3e-13 79.7 60 66.7
Aqoxy2G03410 Aquilegia oxysepala HOM05D004016 ORTHO05D004732 4.3e-13 79.3 87 51.7
CiPaw.08G107200 Carya illinoinensis HOM05D004016 ORTHO05D004732 4.3e-13 79.3 60 63.3
Manes.05G079900 Manihot esculenta HOM05D004016 ORTHO05D004732 4.3e-13 79.3 107 43.9
Sc17g0001350 Simmondsia chinensis HOM05D004016 ORTHO05D004732 5.6e-13 79.0 61 68.9
Sc05g0001440 Simmondsia chinensis HOM05D004016 ORTHO05D004732 7.3e-13 78.6 63 66.7
TAR636G0684 Trochodendron aralioides HOM05D004016 ORTHO05D004732 7.3e-13 78.6 98 50.0
Cpa.g.sc487.4 Carica papaya HOM05D004016 ORTHO05D004732 9.5e-13 78.2 89 50.6
Potri.005G211400 Populus trichocarpa HOM05D004016 ORTHO05D004732 1.2e-12 77.8 117 43.6
Gorai.009G456000 Gossypium raimondii HOM05D004016 ORTHO05D004732 2.1e-12 77.0 115 46.1
AUR62028601 Chenopodium quinoa HOM05D004016 ORTHO05D004732 2.8e-12 76.6 60 66.7
CsaV3_6G037200 Cucumis sativus L. HOM05D004016 ORTHO05D004732 2.8e-12 76.6 98 48.0
TWI18G0383 Tripterygium wilfordii HOM05D004016 ORTHO05D004732 3.6e-12 76.3 102 48.0
Cc01_g19290 Coffea canephora HOM05D004016 ORTHO05D004732 4.7e-12 75.9 63 61.9
vmacro14911 Vaccinium macrocarpon HOM05D004016 ORTHO05D004732 6.2e-12 75.5 97 46.4
Duzib133G1129 Durio zibethinus HOM05D004016 ORTHO05D004732 1.0e-11 74.7 121 44.6
Prupe.8G238400 Prunus persica HOM05D004016 ORTHO05D004732 1.4e-11 74.3 60 61.7
MD11G1282800 Malus domestica HOM05D004016 ORTHO05D004732 1.8e-11 73.9 60 60.0
Duzib138G0182 Durio zibethinus HOM05D004016 ORTHO05D004732 3.1e-11 73.2 107 42.1
FAN15G1959 Fragaria x ananassa HOM05D004016 ORTHO05D004732 4.0e-11 72.8 104 48.1
Manes.01G206100 Manihot esculenta HOM05D004016 ORTHO05D004732 4.0e-11 72.8 82 51.2
Sabra02G0041700 Salix brachista HOM05D004016 ORTHO05D004732 4.0e-11 72.8 56 62.5
FAN20G3152 Fragaria x ananassa HOM05D004016 ORTHO05D004732 5.2e-11 72.4 66 60.6
Nn4g22231 Nelumbo nucifera HOM05D004016 ORTHO05D004732 5.2e-11 72.4 57 68.4
Psat6g059840 Pisum sativum HOM05D004016 ORTHO05D004732 6.8e-11 72.0 149 39.6
RcHm_v2.0_Chr6g0290651 Rosa chinensis HOM05D004016 ORTHO05D004732 6.8e-11 72.0 53 71.7
PGSC0003DMG400019358 Solanum tuberosum HOM05D004016 ORTHO05D004732 6.8e-11 72.0 63 58.7
MELO3C014394.2 Cucumis melo HOM05D004016 ORTHO05D004732 8.9e-11 71.6 72 52.8
Eucgr.H01463 Eucalyptus grandis HOM05D004016 ORTHO05D004732 8.9e-11 71.6 64 56.2
Medtr7g095160 Medicago truncatula HOM05D004016 ORTHO05D004732 8.9e-11 71.6 105 43.8
Solyc09g065380.2 Solanum lycopersicum HOM05D004016 ORTHO05D004732 8.9e-11 71.6 63 57.1
Sopen09g027150 Solanum pennellii HOM05D004016 ORTHO05D004732 8.9e-11 71.6 63 57.1
Aa31LG5G2350 Aethionema arabicum HOM05D004016 ORTHO05D004732 1.5e-10 70.9 61 57.4
Gohir.D08G204600 Gossypium hirsutum HOM05D004016 ORTHO05D004732 1.5e-10 70.9 88 51.1
FvH4_2g23281 Fragaria vesca HOM05D004016 ORTHO05D004732 2.0e-10 70.5 66 59.1
FAN24G3262 Fragaria x ananassa HOM05D004016 ORTHO05D004732 2.0e-10 70.5 66 59.1
Lsat_1_v5_gn_8_56660 Lactuca sativa HOM05D004016 ORTHO05D004732 2.0e-10 70.5 60 60.0
CARHR251020 Cardamine hirsuta HOM05D004016 ORTHO05D004732 2.6e-10 70.1 114 41.2
Sabra05G0161500 Salix brachista HOM05D004016 ORTHO05D004732 2.6e-10 70.1 112 43.8
Gohir.A11G124100 Gossypium hirsutum HOM05D004016 ORTHO05D004732 3.4e-10 69.7 71 52.1
Hma1.2p1_0667F.1_g199710 Hydrangea macrophylla HOM05D004016 ORTHO05D004732 3.4e-10 69.7 64 57.8
Migut.D00318 Erythranthe guttata HOM05D004016 ORTHO05D004732 4.4e-10 69.3 103 44.7
FAN27G2694 Fragaria x ananassa HOM05D004016 ORTHO05D004732 4.4e-10 69.3 70 60.0
Hma1.2p1_0822F.1_g224340 Hydrangea macrophylla HOM05D004016 ORTHO05D004732 4.4e-10 69.3 100 47.0
Thhalv10028968m.g Eutrema salsugineum HOM05D004016 ORTHO05D004732 7.5e-10 68.6 60 55.0
Gohir.A08G186500 Gossypium hirsutum HOM05D004016 ORTHO05D004732 7.5e-10 68.6 87 50.6
Gorai.004G216600 Gossypium raimondii HOM05D004016 ORTHO05D004732 7.5e-10 68.6 88 50.0
Lj1C48T4 Lonicera japonica HOM05D004016 ORTHO05D004732 7.5e-10 68.6 101 46.5
Psat3g063280 Pisum sativum HOM05D004016 ORTHO05D004732 7.5e-10 68.6 103 44.7
TWI12G1445 Tripterygium wilfordii HOM05D004016 ORTHO05D004732 7.5e-10 68.6 70 54.3
Carub.0006s3440 Capsella rubella HOM05D004016 ORTHO05D004732 1.3e-09 67.8 173 34.7
TPR.G24294 Trifolium pratense HOM05D004016 ORTHO05D004732 1.7e-09 67.4 161 36.6
AL6G50300 Arabidopsis lyrata HOM05D004016 ORTHO05D004732 2.2e-09 67.0 164 35.4
Sed0007164 Sechium edule HOM05D004016 ORTHO05D004732 2.2e-09 67.0 208 29.8
THA.LOC104801244 Tarenaya hassleriana HOM05D004016 ORTHO05D004732 2.9e-09 66.6 60 58.3
AT4G02715 Arabidopsis thaliana HOM05D004016 ORTHO05D004732 3.7e-09 66.2 60 53.3
Peaxi162Scf01248g00010 Petunia axillaris HOM05D004016 ORTHO05D004732 3.7e-09 66.2 102 50.0
Lj1g0004863 Lotus japonicus HOM05D004016 ORTHO05D004732 4.9e-09 65.9 104 41.3
LjContig00056g0010505 Lotus japonicus HOM05D004016 ORTHO05D004732 4.9e-09 65.9 104 41.3
Medtr1g071810 Medicago truncatula HOM05D004016 ORTHO05D004732 4.9e-09 65.9 103 43.7
Hund02825 Selenicereus undatus HOM05D004016 ORTHO05D004732 4.9e-09 65.9 81 48.1
BcaB05g23659 Brassica carinata HOM05D004016 ORTHO05D004732 1.1e-08 64.7 106 42.5
Gorai.007G138300 Gossypium raimondii HOM05D004016 ORTHO05D004732 1.1e-08 64.7 60 53.3
HanXRQChr04g0118991 Helianthus annuus HOM05D004016 ORTHO05D004732 1.4e-08 64.3 97 43.3
Aqoxy5G00450 Aquilegia oxysepala HOM05D004016 ORTHO05D004732 2.4e-08 63.5 110 42.7
Gohir.D11G129300 Gossypium hirsutum HOM05D004016 ORTHO05D004732 2.4e-08 63.5 60 53.3
Hund27940 Selenicereus undatus HOM05D004016 ORTHO05D004732 3.2e-08 63.2 76 46.1
THA.LOC104825992 Tarenaya hassleriana HOM05D004016 ORTHO05D004732 9.2e-08 61.6 56 57.1
PGR044G0005 Punica granatum HOM05D004016 ORTHO05D004732 1.2e-07 61.2 165 35.8
CAN.G1549.22 Capsicum annuum HOM05D004016 ORTHO05D004732 1.6e-07 60.8 60 53.3
DCAR_018429 Daucus carota HOM05D004016 ORTHO05D004732 3.5e-07 59.7 56 57.1
Sp6g02620 Schrenkiella parvula HOM05D004016 ORTHO05D004732 6.0e-07 58.9 56 53.6
CAN.G1549.21 Capsicum annuum HOM05D004016 ORTHO05D004732 7.8e-07 58.5 60 51.7
DCAR_002723 Daucus carota HOM05D004016 ORTHO05D004732 1.3e-06 57.8 173 28.9
Oeu040656.1 Olea europaea HOM05D004016 ORTHO05D004732 1.3e-06 57.8 103 36.9
CAN.G1549.11 Capsicum annuum HOM05D004016 ORTHO05D004732 1.7e-06 57.4 60 50.0
TWI75G1401 Tripterygium wilfordii HOM05D004016 ORTHO05D004732 2.3e-06 57.0 53 62.3
MSTRG.18246 Avicennia marina HOM05D004016 ORTHO05D004732 8.6e-06 55.1 65 47.7


User provided reference genes

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