Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
VMungo1383G1856 Vigna mungo HOM05D006384 ORTHO05D007917 1.1e-161 573.2 284 100.0
Phvul.001G178300 Phaseolus vulgaris HOM05D006384 ORTHO05D007917 2.6e-142 508.8 284 89.1
Glyma.19G182800 Glycine max HOM05D006384 ORTHO05D007917 3.0e-138 495.4 287 87.5
VMungo1383G2663 Vigna mungo HOM05D006384 ORTHO05D007917 8.8e-138 493.8 283 89.4
arahy.Tifrunner.gnm1.ann1.TG2889 Arachis hypogaea HOM05D006384 ORTHO05D007917 4.5e-118 428.3 292 76.4
arahy.Tifrunner.gnm1.ann1.FRB5VT Arachis hypogaea HOM05D006384 ORTHO05D007917 2.2e-117 426.0 292 76.0
Medtr7g101760 Medicago truncatula HOM05D006384 ORTHO05D007917 3.6e-115 418.7 282 75.2
Psat3g043320 Pisum sativum HOM05D006384 ORTHO05D007917 1.8e-114 416.4 293 74.4
TPR.G9375 Trifolium pratense HOM05D006384 ORTHO05D007917 3.4e-113 412.1 284 75.0
Lalb_Chr20g0112661 Lupinus albus HOM05D006384 ORTHO05D007917 4.4e-113 411.8 282 76.6
Lj1g0002515 Lotus japonicus HOM05D006384 ORTHO05D007917 1.4e-111 406.8 294 72.4
Ca_08852_v3 Cicer arietinum L. HOM05D006384 ORTHO05D007917 1.9e-108 396.4 289 72.7
CiPaw.10G132500 Carya illinoinensis HOM05D006384 ORTHO05D007917 8.8e-106 387.5 300 69.0
Haze_20571 Corylus avellana HOM05D006384 ORTHO05D007917 2.3e-101 372.9 303 65.7
Thecc.05G063500 Theobroma cacao HOM05D006384 ORTHO05D007917 7.2e-100 367.9 297 64.3
FAN14G1974 Fragaria x ananassa HOM05D006384 ORTHO05D007917 2.8e-99 365.9 282 67.0
FAN14G4113 Fragaria x ananassa HOM05D006384 ORTHO05D007917 2.8e-99 365.9 282 67.0
Prupe.6G234600 Prunus persica HOM05D006384 ORTHO05D007917 2.8e-99 365.9 290 66.9
FAN02G0742 Fragaria x ananassa HOM05D006384 ORTHO05D007917 4.7e-99 365.2 282 67.0
MD12G1115500 Malus domestica HOM05D006384 ORTHO05D007917 6.1e-99 364.8 299 66.9
FAN09G1862 Fragaria x ananassa HOM05D006384 ORTHO05D007917 8.0e-99 364.4 282 66.7
QL07p044018 Quercus lobata HOM05D006384 ORTHO05D007917 1.0e-98 364.0 326 61.3
Hma1.2p1_0205F.1_g087265 Hydrangea macrophylla HOM05D006384 ORTHO05D007917 1.4e-98 363.6 283 68.6
Duzib093G1098 Durio zibethinus HOM05D006384 ORTHO05D007917 1.8e-98 363.2 298 66.1
RcHm_v2.0_Chr3g0469981 Rosa chinensis HOM05D006384 ORTHO05D007917 1.8e-98 363.2 294 66.7
Gorai.009G415700 Gossypium raimondii HOM05D006384 ORTHO05D007917 5.2e-98 361.7 297 64.0
TWI74G0201 Tripterygium wilfordii HOM05D006384 ORTHO05D007917 2.6e-97 359.4 297 64.3
Gohir.A04G072900 Gossypium hirsutum HOM05D006384 ORTHO05D007917 4.4e-97 358.6 296 63.9
Sopen10g035590 Solanum pennellii HOM05D006384 ORTHO05D007917 4.4e-97 358.6 295 65.4
Gohir.D04G111800 Gossypium hirsutum HOM05D006384 ORTHO05D007917 7.5e-97 357.8 297 63.3
Solyc10g086210.2 Solanum lycopersicum HOM05D006384 ORTHO05D007917 9.8e-97 357.5 295 65.1
Potri.006G126200 Populus trichocarpa HOM05D006384 ORTHO05D007917 3.7e-96 355.5 299 62.5
CAN.G509.15 Capsicum annuum HOM05D006384 ORTHO05D007917 6.4e-96 354.8 287 65.9
Rhsim03G0093600 Rhododendron simsii HOM05D006384 ORTHO05D007917 1.8e-95 353.2 310 61.9
MELO3C009346.2 Cucumis melo HOM05D006384 ORTHO05D007917 7.0e-95 351.3 296 64.9
Nn2g11540 Nelumbo nucifera HOM05D006384 ORTHO05D007917 2.7e-94 349.4 299 62.9
COL.COLO4_26986 Corchorus olitorius HOM05D006384 ORTHO05D001525 3.5e-94 349.0 255 68.2
TAR369G0955 Trochodendron aralioides HOM05D006384 ORTHO05D007917 4.6e-94 348.6 304 60.5
Peaxi162Scf00488g00042 Petunia axillaris HOM05D006384 ORTHO05D007917 7.8e-94 347.8 224 74.6
CsaV3_3G035870 Cucumis sativus L. HOM05D006384 ORTHO05D007917 1.0e-93 347.4 298 64.1
THA.LOC104823480 Tarenaya hassleriana HOM05D006384 ORTHO05D007917 1.7e-93 346.7 308 62.7
ClCG10G020230 Citrullus lanatus HOM05D006384 ORTHO05D007917 3.0e-93 345.9 298 65.4
Atru.chr8.1840 Acer truncatum HOM05D006384 ORTHO05D007917 8.6e-93 344.4 287 62.4
Cc06_g04070 Coffea canephora HOM05D006384 ORTHO05D007917 1.1e-92 344.0 226 73.0
SGA_v2.0_scaffold452G51820 Striga asiatica HOM05D006384 ORTHO05D007917 5.6e-92 341.7 291 62.5
GSVIVG01025711001 Vitis vinifera HOM05D006384 ORTHO05D007917 7.3e-92 341.3 243 70.4
Lsat_1_v5_gn_1_52961 Lactuca sativa HOM05D006384 ORTHO05D007917 1.2e-91 340.5 275 64.7
HanXRQChr01g0027531 Helianthus annuus HOM05D006384 ORTHO05D007917 2.1e-91 339.7 273 61.5
Migut.L01690 Erythranthe guttata HOM05D006384 ORTHO05D007917 2.8e-91 339.3 284 64.1
PSO801G0099 Papaver somniferum HOM05D006384 ORTHO05D007917 1.0e-90 337.4 272 64.7
A03p20380 Brassica napus HOM05D006384 ORTHO05D007917 4.0e-90 335.5 289 62.3
BraA03t11282Z Brassica rapa HOM05D006384 ORTHO05D007917 4.0e-90 335.5 289 62.3
ECA248G2568 Erigeron canadensis HOM05D006384 ORTHO05D007917 5.2e-90 335.1 277 62.8
BcaC01g05625 Brassica carinata HOM05D006384 ORTHO05D007917 1.5e-89 333.6 295 60.7
AT2G37020 Arabidopsis thaliana HOM05D006384 ORTHO05D007917 2.0e-89 333.2 220 73.6
BcaB01g03801 Brassica carinata HOM05D006384 ORTHO05D007917 2.0e-89 333.2 233 70.0
Sp4g19300 Schrenkiella parvula HOM05D006384 ORTHO05D007917 2.0e-89 333.2 218 73.9
BolC3t14788H Brassica oleracea HOM05D006384 ORTHO05D007917 2.6e-89 332.8 296 60.8
Thhalv10016975m.g Eutrema salsugineum HOM05D006384 ORTHO05D007917 3.4e-89 332.4 307 59.6
Lj2A115T51 Lonicera japonica HOM05D006384 ORTHO05D007917 4.4e-89 332.0 301 59.5
PSO339G6114 Papaver somniferum HOM05D006384 ORTHO05D007917 4.4e-89 332.0 271 63.8
THA.LOC104806487 Tarenaya hassleriana HOM05D006384 ORTHO05D007917 4.4e-89 332.0 216 75.5
Carub.0004s1888 Capsella rubella HOM05D006384 ORTHO05D007917 5.8e-89 331.6 217 74.2
MSTRG.10316 Avicennia marina HOM05D006384 ORTHO05D007917 7.5e-89 331.3 262 64.5
SalBow5G1519 Salvia bowleyana HOM05D006384 ORTHO05D007917 4.9e-88 328.6 303 60.1
SalBow5G1643 Salvia bowleyana HOM05D006384 ORTHO05D007917 4.9e-88 328.6 303 60.1
Sed0012269 Sechium edule HOM05D006384 ORTHO05D007917 6.4e-88 328.2 240 69.2
C03p23970 Brassica napus HOM05D006384 ORTHO05D007917 8.3e-88 327.8 290 61.4
ATR0680G046 Amborella trichopoda HOM05D006384 ORTHO05D007917 1.4e-87 327.0 289 58.1
AUR62040461 Chenopodium quinoa HOM05D006384 ORTHO05D007917 1.9e-87 326.6 242 65.7
Os10g0443200 Oryza sativa ssp. japonica HOM05D006384 ORTHO05D007917 3.2e-87 325.9 248 65.7
AL4G33330 Arabidopsis lyrata HOM05D006384 ORTHO05D007917 7.0e-87 324.7 217 73.3
Eucgr.A01141 Eucalyptus grandis HOM05D006384 ORTHO05D007917 7.0e-87 324.7 305 57.4
Aa31LG5G22260 Aethionema arabicum HOM05D006384 ORTHO05D007917 9.2e-87 324.3 215 74.0
Nitab4.5_0002130g0050 Nicotiana tabacum HOM05D006384 ORTHO05D007917 1.6e-86 323.6 312 59.6
Ah.15g092420 Amaranthus hybridus HOM05D006384 ORTHO05D007917 2.0e-86 323.2 287 58.5
DCAR_009302 Daucus carota HOM05D006384 ORTHO05D007917 3.5e-86 322.4 216 70.4
CARHR131500 Cardamine hirsuta HOM05D006384 ORTHO05D007917 7.8e-86 321.2 304 58.2
Hund20279 Selenicereus undatus HOM05D006384 ORTHO05D007917 1.0e-85 320.9 253 61.7
Sc20g0005270 Simmondsia chinensis HOM05D006384 ORTHO05D007917 1.7e-85 320.1 217 70.0
Dinv37301 Davidia involucrata HOM05D006384 ORTHO05D007917 5.0e-85 318.5 285 61.4
Aqoxy2G01819 Aquilegia oxysepala HOM05D006384 ORTHO05D007917 6.6e-85 318.2 229 67.7
Nitab4.5_0000754g0290 Nicotiana tabacum HOM05D006384 ORTHO05D007917 5.6e-84 315.1 255 64.7
CSS0039092 Camellia sinensis var. sinensis HOM05D006384 ORTHO05D007917 1.6e-83 313.5 189 79.4
Oeu016975.2 Olea europaea HOM05D006384 ORTHO05D007917 1.6e-83 313.5 271 60.1
CANSAT80G0575 Cannabis sativa HOM05D006384 ORTHO05D007917 1.8e-82 310.1 276 62.0
CDE06G0314 Ceratophyllum demersum HOM05D006384 ORTHO05D007917 5.8e-81 305.1 225 65.8
EL10Ac7g16562 Beta vulgaris HOM05D006384 ORTHO05D007917 6.4e-80 301.6 292 56.2
HPP92_025998 Vanilla planifolia HOM05D006384 ORTHO05D007917 2.7e-78 296.2 214 65.4
Actinidia40017 Actinidia chinensis HOM05D006384 ORTHO05D007917 6.6e-77 291.6 225 68.0
SEGI_26624 Sequoiadendron giganteum HOM05D006384 ORTHO05D007917 8.6e-69 264.6 221 57.5
PGR004G0408 Punica granatum HOM05D006384 ORTHO05D007917 3.6e-67 259.2 237 58.2
AagrBONN_evm.TU.Sc2ySwM_117.2066 Anthoceros agrestis HOM05D006384 ORTHO05D007917 5.2e-66 255.4 212 56.1
Mapoly0009s0045 Marchantia polymorpha HOM05D006384 ORTHO05D007917 1.3e-64 250.8 213 56.3
Sc20g0001670 Simmondsia chinensis HOM05D006384 ORTHO05D007917 1.6e-62 243.8 212 59.0
unitig_0.g684 Utricularia gibba HOM05D006384 ORTHO05D007917 1.1e-55 221.1 208 58.2
FvH4_6g16140 Fragaria vesca HOM05D006384 ORTHO05D007917 3.5e-54 216.1 201 59.7
CBR_g45408 Chara braunii HOM05D006384 ORTHO05D007917 1.3e-53 214.2 229 48.9
Cpa.g.c35130 Carica papaya HOM05D006384 ORTHO05D007917 5.1e-53 212.2 151 69.5
CBR_g30715 Chara braunii HOM05D001230 ORTHO05D007917 8.7e-53 211.5 211 48.3
SMO197G0035 Selaginella moellendorffii HOM05D006384 ORTHO05D007917 1.6e-51 207.2 191 51.8
Manes.09G064200 Manihot esculenta HOM05D006384 ORTHO05D007917 4.8e-51 205.7 212 57.1
TAR623G0498 Trochodendron aralioides HOM05D001475 ORTHO05D001525 3.1e-50 203.0 161 64.0
Glyma.03G182200 Glycine max HOM05D006384 ORTHO05D007917 4.0e-50 202.6 140 78.6
vmacro07280 Vaccinium macrocarpon HOM05D006384 ORTHO05D007917 8.4e-48 194.9 159 63.5
CSS0004677 Camellia sinensis var. sinensis HOM05D006384 ORTHO05D007917 1.6e-46 190.7 141 68.1
PSO832G0438 Papaver somniferum HOM05D006384 ORTHO05D007917 4.8e-43 179.1 105 80.0
CSS0019463 Camellia sinensis var. sinensis HOM05D006384 ORTHO05D007917 1.2e-38 164.5 154 59.1
Ciclev10013845m.g Citrus clementina HOM05D006384 ORTHO05D007917 1.2e-38 164.5 127 64.6
AUR62041978 Chenopodium quinoa HOM05D006384 ORTHO05D007917 1.9e-36 157.1 121 62.0
Ciclev10013192m.g Citrus clementina HOM05D006384 ORTHO05D007917 4.5e-33 146.0 91 74.7
CSS0008908 Camellia sinensis var. sinensis HOM05D006384 ORTHO05D007917 1.1e-31 141.4 76 86.8
CSS0018803 Camellia sinensis var. sinensis HOM05D006384 ORTHO05D007917 1.1e-31 141.4 76 86.8
Cfa026119 Carpinus fangiana HOM05D006384 ORTHO05D007917 1.0e-16 91.7 225 27.1
Zm00001eb222550 Zea mays HOM05D006384 ORTHO05D007917 7.2e-15 85.5 117 47.0
PRCOL_00004570 Prasinoderma coloniale HOM05D006384 ORTHO05D007917 3.1e-10 70.1 225 24.0
Cpa.g.sc2150.3 Carica papaya HOM05D006384 ORTHO05D007917 1.2e-09 68.2 56 64.3
DCAR_017395 Daucus carota HOM05D006384 ORTHO05D007917 4.5e-09 66.2 39 71.8
Hma1.2p1_0473F.1_g160080 Hydrangea macrophylla HOM05D005250 ORTHO05D006342 1.3e-08 64.7 221 23.1
Os01g0265900 Oryza sativa ssp. japonica HOM05D005250 ORTHO05D006342 1.3e-08 64.7 238 24.4
Zm00001eb333230 Zea mays HOM05D005250 ORTHO05D006342 5.0e-08 62.8 211 25.1
AUR62007874 Chenopodium quinoa HOM05D005250 ORTHO05D006342 1.1e-07 61.6 167 24.6
Cre12.g527850 Chlamydomonas reinhardtii HOM05D006384 ORTHO05D007917 2.5e-07 60.5 217 22.6
CANSAT64G2789 Cannabis sativa HOM05D005250 ORTHO05D006342 3.2e-07 60.1 167 26.3
Sed0000568 Sechium edule HOM05D005250 ORTHO05D006342 3.2e-07 60.1 222 23.9
Atru.chr11.1561 Acer truncatum HOM05D005250 ORTHO05D006342 4.2e-07 59.7 261 23.8
MELO3C032679.2 Cucumis melo HOM05D006384 ORTHO05D007917 5.5e-07 59.3 55 60.0
EL10Ac6g14674 Beta vulgaris HOM05D005250 ORTHO05D006342 9.4e-07 58.5 167 23.4
Aqoxy2G00415 Aquilegia oxysepala HOM05D005250 ORTHO05D006342 1.2e-06 58.2 130 26.2
Lj3A1027G83 Lonicera japonica HOM05D005250 ORTHO05D006342 1.2e-06 58.2 167 25.7
AagrBONN_evm.TU.Sc2ySwM_117.326 Anthoceros agrestis HOM05D005250 ORTHO05D006342 1.6e-06 57.8 224 22.8
TAR374G1213 Trochodendron aralioides HOM05D000928 ORTHO05D000023 1.6e-06 57.8 40 60.0
SMO236G0018 Selaginella moellendorffii HOM05D005250 ORTHO05D006342 2.1e-06 57.4 227 20.7
MCO04G452 Micromonas commoda HOM05D006384 ORTHO05D007917 2.7e-06 57.0 213 24.4
RcHm_v2.0_Chr4g0411411 Rosa chinensis HOM05D006384 ORTHO05D007917 4.7e-06 56.2 47 57.4


User provided reference genes

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